RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 LETM1O95202 739 aaPredicted RBP29.32■■■□□ 2.28
CBX4-202ENST00000448310 FSCBQ5H9T9 825 aa29.32■■■□□ 2.28
CBX4-202ENST00000448310 MS4A13Q5J8X5 152 aa29.32■■■□□ 2.28
CBX4-202ENST00000448310 ZNF776Q68DI1 518 aaPredicted RBP29.32■■■□□ 2.28
CBX4-202ENST00000448310 ZNF557Q8N988 423 aaPredicted RBP29.32■■■□□ 2.28
CBX4-202ENST00000448310 TTC17Q96AE7 1141 aa29.32■■■□□ 2.28
CBX4-202ENST00000448310 TM7SF3Q9NS93 570 aa29.32■■■□□ 2.28
CBX4-202ENST00000448310 PCOLCE2Q9UKZ9 415 aa29.32■■■□□ 2.28
CBX4-202ENST00000448310 PLXNA2O75051 1894 aa29.31■■■□□ 2.28
CBX4-202ENST00000448310 CAPN9O14815 690 aa29.31■■■□□ 2.28
CBX4-202ENST00000448310 PAPSS1O43252 624 aaPredicted RBP29.31■■■□□ 2.28
CBX4-202ENST00000448310 SART1O43290 800 aaKnown RBP29.31■■■□□ 2.28
CBX4-202ENST00000448310 CBFA2T3O75081 653 aa29.31■■■□□ 2.28
CBX4-202ENST00000448310 FSBPO95073 299 aa29.31■■■□□ 2.28
CBX4-202ENST00000448310 ACADSBP45954 432 aa29.31■■■□□ 2.28
CBX4-202ENST00000448310 ZBTB16Q05516 673 aa29.31■■■□□ 2.28
CBX4-202ENST00000448310 NNTQ13423 1086 aa29.31■■■□□ 2.28
CBX4-202ENST00000448310 CDH18Q13634 790 aa29.31■■■□□ 2.28
CBX4-202ENST00000448310 TTC31Q49AM3 519 aaPredicted RBP29.31■■■□□ 2.28
CBX4-202ENST00000448310 DCAF6Q58WW2 860 aa29.31■■■□□ 2.28
CBX4-202ENST00000448310 GJB7Q6PEY0 223 aa29.31■■■□□ 2.28
CBX4-202ENST00000448310 IL27RAQ6UWB1 636 aa29.31■■■□□ 2.28
CBX4-202ENST00000448310 LAYNQ6UX15 382 aa29.31■■■□□ 2.28
CBX4-202ENST00000448310 BIRC7Q96CA5 298 aa29.31■■■□□ 2.28
CBX4-202ENST00000448310 MRGPRX3Q96LB0 322 aa29.31■■■□□ 2.28
CBX4-202ENST00000448310 SLC4A5Q9BY07 1137 aa29.31■■■□□ 2.28
CBX4-202ENST00000448310 PLXNB3Q9ULL4 1909 aa29.3■■■□□ 2.28
CBX4-202ENST00000448310 E5RJQ4 531 aa29.3■■■□□ 2.28
CBX4-202ENST00000448310 SIN3BO75182 1162 aa29.3■■■□□ 2.28
CBX4-202ENST00000448310 CTSOP43234 321 aaPredicted RBP29.3■■■□□ 2.28
CBX4-202ENST00000448310 AFF3P51826 1226 aaKnown RBP29.3■■■□□ 2.28
CBX4-202ENST00000448310 ST8SIA6P61647 398 aa29.3■■■□□ 2.28
CBX4-202ENST00000448310 KIF19Q2TAC6 998 aa29.3■■■□□ 2.28
CBX4-202ENST00000448310 DHX40Q8IX18 779 aaKnown RBP29.3■■■□□ 2.28
CBX4-202ENST00000448310 ZNF606Q8WXB4 792 aa29.3■■■□□ 2.28
CBX4-202ENST00000448310 CRACR2AQ9BSW2 395 aa29.3■■■□□ 2.28
CBX4-202ENST00000448310 RSPH9Q9H1X1 276 aaPredicted RBP29.3■■■□□ 2.28
CBX4-202ENST00000448310 TM9SF3Q9HD45 589 aa29.3■■■□□ 2.28
CBX4-202ENST00000448310 PKD1L2Q7Z442 2459 aa29.29■■■□□ 2.28
CBX4-202ENST00000448310 SRRM3A6NNA2 597 aaPredicted RBP29.29■■■□□ 2.28
CBX4-202ENST00000448310 THAP12O43422 761 aa29.29■■■□□ 2.28
CBX4-202ENST00000448310 ZNF883P0CG24 379 aa29.29■■■□□ 2.28
CBX4-202ENST00000448310 PITX1P78337 314 aaPredicted RBP29.29■■■□□ 2.28
CBX4-202ENST00000448310 ZC3H12AQ5D1E8 599 aaKnown RBP29.29■■■□□ 2.28
CBX4-202ENST00000448310 PITRM1Q5JRX3 1037 aa29.29■■■□□ 2.28
CBX4-202ENST00000448310 RAP1GAP2Q684P5 730 aa29.29■■■□□ 2.28
CBX4-202ENST00000448310 LGI2Q8N0V4 545 aa29.29■■■□□ 2.28
CBX4-202ENST00000448310 GANCQ8TET4 914 aa29.29■■■□□ 2.28
CBX4-202ENST00000448310 TJP2Q9UDY2 1190 aa29.29■■■□□ 2.28
CBX4-202ENST00000448310 SNX11Q9Y5W9 270 aa29.29■■■□□ 2.28
CBX4-202ENST00000448310 PTPRBP23467 1997 aa29.29■■■□□ 2.28
CBX4-202ENST00000448310 FAM221BA6H8Z2 402 aa29.28■■■□□ 2.28
CBX4-202ENST00000448310 MED7O43513 233 aa29.28■■■□□ 2.28
CBX4-202ENST00000448310 LUC7L3O95232 432 aaKnown RBP29.28■■■□□ 2.28
CBX4-202ENST00000448310 ASLP04424 464 aa29.28■■■□□ 2.28
CBX4-202ENST00000448310 GNA15P30679 374 aa29.28■■■□□ 2.28
CBX4-202ENST00000448310 NUMBP49757 651 aa29.28■■■□□ 2.28
CBX4-202ENST00000448310 HNRNPA1L2Q32P51 320 aaKnown RBP29.28■■■□□ 2.28
CBX4-202ENST00000448310 SLCO6A1Q86UG4 719 aa29.28■■■□□ 2.28
CBX4-202ENST00000448310 CHSY1Q86X52 802 aa29.28■■■□□ 2.28
CBX4-202ENST00000448310 CREBRFQ8IUR6 639 aa29.28■■■□□ 2.28
CBX4-202ENST00000448310 CCDC117Q8IWD4 279 aaPredicted RBP29.28■■■□□ 2.28
CBX4-202ENST00000448310 STK32AQ8WU08 396 aa29.28■■■□□ 2.28
CBX4-202ENST00000448310 ADAMTS14Q8WXS8 1223 aa29.28■■■□□ 2.28
CBX4-202ENST00000448310 PABPC3Q9H361 631 aaKnown RBP29.28■■■□□ 2.28
CBX4-202ENST00000448310 SGK2Q9HBY8 427 aa29.28■■■□□ 2.28
CBX4-202ENST00000448310 SERGEFQ9UGK8 458 aa29.28■■■□□ 2.28
CBX4-202ENST00000448310 ERVW-1Q9UQF0 538 aa29.28■■■□□ 2.28
CBX4-202ENST00000448310 FAM47DPA6NHR8 397 aa29.27■■■□□ 2.28
CBX4-202ENST00000448310 TTC34A8MYJ7 566 aa29.27■■■□□ 2.28
CBX4-202ENST00000448310 TRUB2O95900 331 aaKnown RBP29.27■■■□□ 2.28
CBX4-202ENST00000448310 APOEP02649 317 aa29.27■■■□□ 2.28
CBX4-202ENST00000448310 TACR2P21452 398 aa29.27■■■□□ 2.28
CBX4-202ENST00000448310 APBA1Q02410 837 aa29.27■■■□□ 2.28
CBX4-202ENST00000448310 TAF5Q15542 800 aa29.27■■■□□ 2.28
CBX4-202ENST00000448310 BEND5Q7L4P6 421 aa29.27■■■□□ 2.28
CBX4-202ENST00000448310 TMEM110Q86TL2 294 aa29.27■■■□□ 2.28
CBX4-202ENST00000448310 POPDC2Q9HBU9 364 aa29.27■■■□□ 2.28
CBX4-202ENST00000448310 FBXL12Q9NXK8 326 aa29.27■■■□□ 2.28
CBX4-202ENST00000448310 KCNK3O14649 394 aa29.26■■■□□ 2.27
CBX4-202ENST00000448310 CD27P26842 260 aa29.26■■■□□ 2.27
CBX4-202ENST00000448310 USP8P40818 1118 aa29.26■■■□□ 2.27
CBX4-202ENST00000448310 YWHAZP63104 245 aaKnown RBP29.26■■■□□ 2.27
CBX4-202ENST00000448310 TEAD4Q15561 434 aa29.26■■■□□ 2.27
CBX4-202ENST00000448310 MEA1Q16626 185 aa29.26■■■□□ 2.27
CBX4-202ENST00000448310 ARHGAP44Q17R89 818 aa29.26■■■□□ 2.27
CBX4-202ENST00000448310 TRIM65Q6PJ69 517 aa29.26■■■□□ 2.27
CBX4-202ENST00000448310 APCDD1Q8J025 514 aa29.26■■■□□ 2.27
CBX4-202ENST00000448310 ORAI3Q9BRQ5 295 aa29.26■■■□□ 2.27
CBX4-202ENST00000448310 TRIM62Q9BVG3 475 aa29.26■■■□□ 2.27
CBX4-202ENST00000448310 APOBEC2Q9Y235 224 aaKnown RBP29.26■■■□□ 2.27
CBX4-202ENST00000448310 NCKAP1Q9Y2A7 1128 aa29.26■■■□□ 2.27
CBX4-202ENST00000448310 BTBD3Q9Y2F9 522 aa29.26■■■□□ 2.27
CBX4-202ENST00000448310 ANKRD6Q9Y2G4 727 aa29.26■■■□□ 2.27
CBX4-202ENST00000448310 CEP83Q9Y592 693 aa29.26■■■□□ 2.27
CBX4-202ENST00000448310 DMXL2Q8TDJ6 3036 aa29.26■■■□□ 2.27
CBX4-202ENST00000448310 ZFYVE26Q68DK2 2539 aa29.25■■■□□ 2.27
CBX4-202ENST00000448310 BECN2A8MW95 431 aa29.25■■■□□ 2.27
CBX4-202ENST00000448310 MID1O15344 667 aa29.25■■■□□ 2.27
CBX4-202ENST00000448310 IGLV3-25P01717 112 aa29.25■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms