RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 ATP2A3Q93084 1043 aa7.8□□□□□ -1.16
AC004540.1-206ENST00000448056 TRIM44Q96DX7 344 aaPredicted RBP7.8□□□□□ -1.16
AC004540.1-206ENST00000448056 TMA16Q96EY4 203 aaKnown RBP7.8□□□□□ -1.16
AC004540.1-206ENST00000448056 MYEOVQ96EZ4 313 aa7.8□□□□□ -1.16
AC004540.1-206ENST00000448056 IRX2Q9BZI1 471 aaPredicted RBP7.8□□□□□ -1.16
AC004540.1-206ENST00000448056 GOLPH3Q9H4A6 298 aa7.8□□□□□ -1.16
AC004540.1-206ENST00000448056 BRD9Q9H8M2 597 aa7.8□□□□□ -1.16
AC004540.1-206ENST00000448056 ZWILCHQ9H900 591 aa7.8□□□□□ -1.16
AC004540.1-206ENST00000448056 CD320Q9NPF0 282 aa7.8□□□□□ -1.16
AC004540.1-206ENST00000448056 TRPV5Q9NQA5 729 aa7.8□□□□□ -1.16
AC004540.1-206ENST00000448056 HPS4Q9NQG7 708 aa7.8□□□□□ -1.16
AC004540.1-206ENST00000448056 PRDM9Q9NQV7 894 aa7.8□□□□□ -1.16
AC004540.1-206ENST00000448056 SPHK2Q9NRA0 654 aa7.8□□□□□ -1.16
AC004540.1-206ENST00000448056 GTSE1Q9NYZ3 720 aa7.8□□□□□ -1.16
AC004540.1-206ENST00000448056 SNX10Q9Y5X0 201 aa7.8□□□□□ -1.16
AC004540.1-206ENST00000448056 A0A0C4DFX4 3053 aa7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 DRGXA6NNA5 263 aa7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 F5H5T6 163 aa7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 FAM72CH0Y354 149 aa7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 NARSO43776 548 aaKnown RBP7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 TSPAN3O60637 253 aa7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 SRGAP2O75044 1071 aa7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 NFATC1O95644 943 aa7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 ADH1CP00326 375 aa7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 CYBBP04839 570 aa7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 SRFP11831 508 aa7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 L1CAMP32004 1257 aa7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 SGSHP51688 502 aa7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 VCPP55072 806 aaKnown RBP7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 PFKPQ01813 784 aa7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 NRG1Q02297 640 aaPredicted RBP7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 NR1H3Q13133 447 aa7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 CA9Q16790 459 aa7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 PTPRNQ16849 979 aa7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 SMTNL2Q2TAL5 461 aa7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 ITPRIPL2Q3MIP1 535 aa7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 C5orf22Q49AR2 442 aa7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 MPPE1Q53F39 396 aa7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 LY6G5CQ5SRR4 150 aa7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 MPP7Q5T2T1 576 aa7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 FAM72AQ5TYM5 149 aa7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 FAM72DQ6L9T8 149 aa7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 LRRC31Q6UY01 552 aa7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 PEX26Q7Z412 305 aa7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 POLNQ7Z5Q5 900 aa7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 NT5DC3Q86UY8 548 aa7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 CHSY1Q86X52 802 aa7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 FAM72BQ86X60 149 aa7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 RHOT1Q8IXI2 618 aa7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 CFAP52Q8N1V2 620 aa7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 KCTD6Q8NC69 237 aa7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 TTC8Q8TAM2 541 aa7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 DDI1Q8WTU0 396 aa7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 UBE2Q2Q8WVN8 375 aa7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 TSC1Q92574 1164 aa7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 HSPH1Q92598 858 aa7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 CD101Q93033 1021 aa7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 IGSF8Q969P0 613 aa7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 P2RY11Q96G91 374 aa7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 NECAB3Q96P71 396 aaPredicted RBP7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 SNRNP25Q9BV90 132 aaKnown RBP7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 DHX35Q9H5Z1 703 aaKnown RBP7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 ECT2Q9H8V3 914 aa7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 SLC2A4RGQ9NR83 387 aa7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 PLSCR2Q9NRY7 297 aa7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 EVA1BQ9NVM1 165 aa7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 GPATCH2LQ9NWQ4 482 aa7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 PLA2G2EQ9NZK7 142 aa7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 PPARGC1AQ9UBK2 798 aaKnown RBP7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 AMFRQ9UKV5 643 aa7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 VANGL2Q9ULK5 521 aa7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 AP4E1Q9UPM8 1137 aa7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 SORCS3Q9UPU3 1222 aa7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 CAPN6Q9Y6Q1 641 aa7.79□□□□□ -1.16
AC004540.1-206ENST00000448056 VCANP13611 3396 aa7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 IGLV3-10A0A075B6K4 115 aa7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 GOLGA6L9A6NEM1 432 aa7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 E9PAM4 449 aa7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 NEDD8-MDP1E9PL57 170 aa7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 HOXC11O43248 304 aaPredicted RBP7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 PSTPIP1O43586 416 aa7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 CREB3O43889 395 aa7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 TBL1XO60907 577 aa7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 LRIG2O94898 1065 aa7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 FTCDO95954 541 aa7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 PENKP01210 267 aaPredicted RBP7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 CYP17A1P05093 508 aa7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 ADH5P11766 374 aa7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 TNNT1P13805 278 aa7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 TYRP14679 529 aa7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 GLULP15104 373 aa7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 IL4RP24394 825 aa7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 GGCXP38435 758 aa7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 HCAR3P49019 387 aa7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 PEX5P50542 639 aa7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 ARSEP51690 589 aa7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 RPS24P62847 133 aaKnown RBP7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 GAD2Q05329 585 aa7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 SEMA3BQ13214 749 aa7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 PDK2Q15119 407 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms