RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 GOLGA8SH3BPF8 625 aa19.64■□□□□ 0.74
HMGA1-205ENST00000447654 GOLGA8MH3BSY2 632 aa19.64■□□□□ 0.74
HMGA1-205ENST00000447654 SGK1O00141 431 aa19.64■□□□□ 0.74
HMGA1-205ENST00000447654 GPR25O00155 361 aa19.64■□□□□ 0.74
HMGA1-205ENST00000447654 DYNC1LI2O43237 492 aaPredicted RBP19.64■□□□□ 0.74
HMGA1-205ENST00000447654 TMBIM6P55061 237 aa19.64■□□□□ 0.74
HMGA1-205ENST00000447654 PPP3CAQ08209 521 aa19.64■□□□□ 0.74
HMGA1-205ENST00000447654 CD300CQ08708 224 aa19.64■□□□□ 0.74
HMGA1-205ENST00000447654 PPP2R5DQ14738 602 aa19.64■□□□□ 0.74
HMGA1-205ENST00000447654 ZNF846Q147U1 533 aa19.64■□□□□ 0.74
HMGA1-205ENST00000447654 BBS9Q3SYG4 887 aa19.64■□□□□ 0.74
HMGA1-205ENST00000447654 IRAK1BP1Q5VVH5 260 aa19.64■□□□□ 0.74
HMGA1-205ENST00000447654 PPP2R2DQ66LE6 453 aa19.64■□□□□ 0.74
HMGA1-205ENST00000447654 BPHLQ86WA6 291 aaPredicted RBP19.64■□□□□ 0.74
HMGA1-205ENST00000447654 DAW1Q8N136 415 aa19.64■□□□□ 0.74
HMGA1-205ENST00000447654 KYQ8NBH2 561 aa19.64■□□□□ 0.74
HMGA1-205ENST00000447654 TANKQ92844 425 aa19.64■□□□□ 0.74
HMGA1-205ENST00000447654 VCPIP1Q96JH7 1222 aa19.64■□□□□ 0.74
HMGA1-205ENST00000447654 ALPK1Q96QP1 1244 aa19.64■□□□□ 0.74
HMGA1-205ENST00000447654 TAAR1Q96RJ0 339 aa19.64■□□□□ 0.74
HMGA1-205ENST00000447654 ZNF395Q9H8N7 513 aaPredicted RBP19.64■□□□□ 0.74
HMGA1-205ENST00000447654 CRNNQ9UBG3 495 aaPredicted RBP19.64■□□□□ 0.74
HMGA1-205ENST00000447654 CCDC195A0A1B0GUA6 201 aa19.64■□□□□ 0.73
HMGA1-205ENST00000447654 TRDMT1O14717 391 aaKnown RBP19.64■□□□□ 0.73
HMGA1-205ENST00000447654 RFPL1O75677 317 aa19.64■□□□□ 0.73
HMGA1-205ENST00000447654 CHEK2O96017 543 aa19.64■□□□□ 0.73
HMGA1-205ENST00000447654 CD58P19256 250 aa19.64■□□□□ 0.73
HMGA1-205ENST00000447654 GRK2P25098 689 aa19.64■□□□□ 0.73
HMGA1-205ENST00000447654 NSUN2Q08J23 767 aaKnown RBP eCLIP19.64■□□□□ 0.73
HMGA1-205ENST00000447654 IGFN1Q86VF2 1251 aa19.64■□□□□ 0.73
HMGA1-205ENST00000447654 ELMOD1Q8N336 334 aa19.64■□□□□ 0.73
HMGA1-205ENST00000447654 ACDQ96AP0 544 aa19.64■□□□□ 0.73
HMGA1-205ENST00000447654 ZNF778Q96MU6 729 aa19.64■□□□□ 0.73
HMGA1-205ENST00000447654 TEKT3Q9BXF9 490 aa19.64■□□□□ 0.73
HMGA1-205ENST00000447654 KCND2Q9NZV8 630 aa19.64■□□□□ 0.73
HMGA1-205ENST00000447654 RIPK3Q9Y572 518 aa19.64■□□□□ 0.73
HMGA1-205ENST00000447654 TMEM150BA6NC51 233 aa19.63■□□□□ 0.73
HMGA1-205ENST00000447654 CAPN15O75808 1086 aa19.63■□□□□ 0.73
HMGA1-205ENST00000447654 TCEA1P23193 301 aaKnown RBP19.63■□□□□ 0.73
HMGA1-205ENST00000447654 ME2P23368 584 aa19.63■□□□□ 0.73
HMGA1-205ENST00000447654 EPHA3P29320 983 aa19.63■□□□□ 0.73
HMGA1-205ENST00000447654 RPS6P62753 249 aaKnown RBP19.63■□□□□ 0.73
HMGA1-205ENST00000447654 NFATC3Q12968 1075 aa19.63■□□□□ 0.73
HMGA1-205ENST00000447654 BNIP3Q12983 259 aa19.63■□□□□ 0.73
HMGA1-205ENST00000447654 KLF10Q13118 480 aa19.63■□□□□ 0.73
HMGA1-205ENST00000447654 SF3B4Q15427 424 aaKnown RBP eCLIP19.63■□□□□ 0.733e-7■■□□□ 12.6
HMGA1-205ENST00000447654 TRIM71Q2Q1W2 868 aaKnown RBP19.63■□□□□ 0.73
HMGA1-205ENST00000447654 TEDDM1Q5T9Z0 273 aa19.63■□□□□ 0.73
HMGA1-205ENST00000447654 LPAR1Q92633 364 aa19.63■□□□□ 0.73
HMGA1-205ENST00000447654 KAT5Q92993 513 aa19.63■□□□□ 0.73
HMGA1-205ENST00000447654 TOP1MTQ969P6 601 aa19.63■□□□□ 0.73
HMGA1-205ENST00000447654 RMDN3Q96TC7 470 aa19.63■□□□□ 0.73
HMGA1-205ENST00000447654 VRTNQ9H8Y1 702 aa19.63■□□□□ 0.73
HMGA1-205ENST00000447654 MAGEE1Q9HCI5 957 aa19.63■□□□□ 0.73
HMGA1-205ENST00000447654 CLPXO76031 633 aa19.63■□□□□ 0.73
HMGA1-205ENST00000447654 TPPPO94811 219 aa19.63■□□□□ 0.73
HMGA1-205ENST00000447654 ERBB2P04626 1255 aa19.63■□□□□ 0.73
HMGA1-205ENST00000447654 P4HBP07237 508 aaKnown RBP19.63■□□□□ 0.73
HMGA1-205ENST00000447654 YBX3P16989 372 aaKnown RBP eCLIP19.63■□□□□ 0.735e-37■■□□□ 14
HMGA1-205ENST00000447654 KRT6CP48668 564 aa19.63■□□□□ 0.73
HMGA1-205ENST00000447654 NUMBP49757 651 aa19.63■□□□□ 0.73
HMGA1-205ENST00000447654 KRT76Q01546 638 aa19.63■□□□□ 0.73
HMGA1-205ENST00000447654 TKFCQ3LXA3 575 aa19.63■□□□□ 0.73
HMGA1-205ENST00000447654 FGD3Q5JSP0 725 aa19.63■□□□□ 0.73
HMGA1-205ENST00000447654 FAXCQ5TGI0 409 aa19.63■□□□□ 0.73
HMGA1-205ENST00000447654 ANKRD22Q5VYY1 191 aa19.63■□□□□ 0.73
HMGA1-205ENST00000447654 MBLAC2Q68D91 279 aa19.63■□□□□ 0.73
HMGA1-205ENST00000447654 PPP4R4Q6NUP7 873 aa19.63■□□□□ 0.73
HMGA1-205ENST00000447654 PACRGLQ8N7B6 248 aa19.63■□□□□ 0.73
HMGA1-205ENST00000447654 BHLHE22Q8NFJ8 381 aaPredicted RBP19.63■□□□□ 0.73
HMGA1-205ENST00000447654 NACC1Q96RE7 527 aa19.63■□□□□ 0.73
HMGA1-205ENST00000447654 RPAP3Q9H6T3 665 aaPredicted RBP19.63■□□□□ 0.73
HMGA1-205ENST00000447654 RMND5AQ9H871 391 aa19.63■□□□□ 0.73
HMGA1-205ENST00000447654 COQ10BQ9H8M1 238 aa19.63■□□□□ 0.73
HMGA1-205ENST00000447654 ANLNQ9NQW6 1124 aa19.63■□□□□ 0.73
HMGA1-205ENST00000447654 ATP11BQ9Y2G3 1177 aa19.63■□□□□ 0.73
HMGA1-205ENST00000447654 CORINQ9Y5Q5 1042 aa19.63■□□□□ 0.73
HMGA1-205ENST00000447654 GOLGA8CPA6NN73 597 aa19.62■□□□□ 0.73
HMGA1-205ENST00000447654 FOXD2O60548 495 aaPredicted RBP19.62■□□□□ 0.73
HMGA1-205ENST00000447654 CHRNB1P11230 501 aa19.62■□□□□ 0.73
HMGA1-205ENST00000447654 KRT5P13647 590 aa19.62■□□□□ 0.73
HMGA1-205ENST00000447654 CCNA2P20248 432 aa19.62■□□□□ 0.73
HMGA1-205ENST00000447654 GABRB2P47870 512 aa19.62■□□□□ 0.73
HMGA1-205ENST00000447654 SLC1A6P48664 564 aa19.62■□□□□ 0.73
HMGA1-205ENST00000447654 TNFAIP1Q13829 316 aa19.62■□□□□ 0.73
HMGA1-205ENST00000447654 RFTN1Q14699 578 aaPredicted RBP19.62■□□□□ 0.73
HMGA1-205ENST00000447654 TIGD2Q4W5G0 525 aa19.62■□□□□ 0.73
HMGA1-205ENST00000447654 WDR78Q5VTH9 848 aa19.62■□□□□ 0.73
HMGA1-205ENST00000447654 SLX4IPQ5VYV7 408 aa19.62■□□□□ 0.73
HMGA1-205ENST00000447654 FAAH2Q6GMR7 532 aa19.62■□□□□ 0.73
HMGA1-205ENST00000447654 GADL1Q6ZQY3 521 aa19.62■□□□□ 0.73
HMGA1-205ENST00000447654 ENOSF1Q7L5Y1 443 aa19.62■□□□□ 0.73
HMGA1-205ENST00000447654 FAM178BQ8IXR5 827 aa19.62■□□□□ 0.73
HMGA1-205ENST00000447654 PGAM4Q8N0Y7 254 aa19.62■□□□□ 0.73
HMGA1-205ENST00000447654 TTC30BQ8N4P2 665 aa19.62■□□□□ 0.73
HMGA1-205ENST00000447654 GRIN3AQ8TCU5 1115 aa19.62■□□□□ 0.73
HMGA1-205ENST00000447654 STRA6Q9BX79 667 aa19.62■□□□□ 0.73
HMGA1-205ENST00000447654 EHMT1Q9H9B1 1298 aa19.62■□□□□ 0.73
HMGA1-205ENST00000447654 MRPL40Q9NQ50 206 aaKnown RBP19.62■□□□□ 0.73
HMGA1-205ENST00000447654 HACD3Q9P035 362 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms