RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 ZCWPW2Q504Y3 356 aa25.31■■□□□ 1.64
PMS1-214ENST00000446877 MSANTD2Q6P1R3 559 aa25.31■■□□□ 1.64
PMS1-214ENST00000446877 NCEH1Q6PIU2 408 aa25.31■■□□□ 1.64
PMS1-214ENST00000446877 HSCBQ8IWL3 235 aa25.31■■□□□ 1.64
PMS1-214ENST00000446877 DHX40Q8IX18 779 aaKnown RBP25.31■■□□□ 1.64
PMS1-214ENST00000446877 SCML4Q8N228 414 aa25.31■■□□□ 1.64
PMS1-214ENST00000446877 HJURPQ8NCD3 748 aaPredicted RBP25.31■■□□□ 1.64
PMS1-214ENST00000446877 FIBINQ8TAL6 211 aa25.31■■□□□ 1.64
PMS1-214ENST00000446877 CNDP2Q96KP4 475 aaKnown RBP25.31■■□□□ 1.64
PMS1-214ENST00000446877 SPATA32Q96LK8 384 aa25.31■■□□□ 1.64
PMS1-214ENST00000446877 UBL7Q96S82 380 aaPredicted RBP25.31■■□□□ 1.64
PMS1-214ENST00000446877 A0A1W2PP55 124 aa25.3■■□□□ 1.64
PMS1-214ENST00000446877 MID1O15344 667 aa25.3■■□□□ 1.64
PMS1-214ENST00000446877 CSKP41240 450 aa25.3■■□□□ 1.64
PMS1-214ENST00000446877 NDUFA8P51970 172 aa25.3■■□□□ 1.64
PMS1-214ENST00000446877 TBX4P57082 545 aa25.3■■□□□ 1.64
PMS1-214ENST00000446877 PKP1Q13835 747 aa25.3■■□□□ 1.64
PMS1-214ENST00000446877 DCAF17Q5H9S7 520 aaPredicted RBP25.3■■□□□ 1.64
PMS1-214ENST00000446877 OR2T34Q8NGX1 318 aa25.3■■□□□ 1.64
PMS1-214ENST00000446877 PIP4K2CQ8TBX8 421 aa25.3■■□□□ 1.64
PMS1-214ENST00000446877 IRGQQ8WZA9 623 aa25.3■■□□□ 1.64
PMS1-214ENST00000446877 AZIN2Q96A70 460 aa25.3■■□□□ 1.64
PMS1-214ENST00000446877 CRELD1Q96HD1 420 aa25.3■■□□□ 1.64
PMS1-214ENST00000446877 NEUROG2Q9H2A3 272 aa25.3■■□□□ 1.64
PMS1-214ENST00000446877 GDF3Q9NR23 364 aa25.3■■□□□ 1.64
PMS1-214ENST00000446877 KNTC1P50748 2209 aa25.29■■□□□ 1.64
PMS1-214ENST00000446877 O00370 1275 aa25.29■■□□□ 1.64
PMS1-214ENST00000446877 YKT6O15498 198 aa25.29■■□□□ 1.64
PMS1-214ENST00000446877 RFPL3O75679 317 aa25.29■■□□□ 1.64
PMS1-214ENST00000446877 IGLV3-27P01718 113 aa25.29■■□□□ 1.64
PMS1-214ENST00000446877 CD38P28907 300 aa25.29■■□□□ 1.64
PMS1-214ENST00000446877 SLC6A4P31645 630 aa25.29■■□□□ 1.64
PMS1-214ENST00000446877 ARRB1P49407 418 aaPredicted RBP25.29■■□□□ 1.64
PMS1-214ENST00000446877 CBWD6Q4V339 395 aa25.29■■□□□ 1.64
PMS1-214ENST00000446877 FAM133BQ5BKY9 247 aaKnown RBP25.29■■□□□ 1.64
PMS1-214ENST00000446877 CBWD3Q5JTY5 395 aa25.29■■□□□ 1.64
PMS1-214ENST00000446877 CBWD5Q5RIA9 395 aa25.29■■□□□ 1.64
PMS1-214ENST00000446877 LRRC69Q6ZNQ3 347 aa25.29■■□□□ 1.64
PMS1-214ENST00000446877 MMAAQ8IVH4 418 aaKnown RBP25.29■■□□□ 1.64
PMS1-214ENST00000446877 CARNMT1Q8N4J0 409 aa25.29■■□□□ 1.64
PMS1-214ENST00000446877 KDM1BQ8NB78 822 aa25.29■■□□□ 1.64
PMS1-214ENST00000446877 SERGEFQ9UGK8 458 aa25.29■■□□□ 1.64
PMS1-214ENST00000446877 FZD4Q9ULV1 537 aa25.29■■□□□ 1.64
PMS1-214ENST00000446877 AK5Q9Y6K8 562 aa25.29■■□□□ 1.64
PMS1-214ENST00000446877 BPTFQ12830 3046 aa25.29■■□□□ 1.64
PMS1-214ENST00000446877 TARSL2A2RTX5 802 aaKnown RBP25.28■■□□□ 1.64
PMS1-214ENST00000446877 SLC8A1P32418 973 aa25.28■■□□□ 1.64
PMS1-214ENST00000446877 RGS7P49802 495 aa25.28■■□□□ 1.64
PMS1-214ENST00000446877 SEMG2Q02383 582 aa25.28■■□□□ 1.64
PMS1-214ENST00000446877 CDH18Q13634 790 aa25.28■■□□□ 1.64
PMS1-214ENST00000446877 SLC45A4Q5BKX6 768 aa25.28■■□□□ 1.64
PMS1-214ENST00000446877 KRBA2Q6ZNG9 492 aa25.28■■□□□ 1.64
PMS1-214ENST00000446877 SAP25Q8TEE9 199 aa25.28■■□□□ 1.64
PMS1-214ENST00000446877 MYO19Q96H55 970 aa25.28■■□□□ 1.64
PMS1-214ENST00000446877 LMLNQ96KR4 655 aa25.28■■□□□ 1.64
PMS1-214ENST00000446877 COQ4Q9Y3A0 265 aa25.28■■□□□ 1.64
PMS1-214ENST00000446877 CEP83Q9Y592 693 aa25.28■■□□□ 1.64
PMS1-214ENST00000446877 MOCS3O95396 460 aa25.27■■□□□ 1.64
PMS1-214ENST00000446877 TBXAS1P24557 533 aaPredicted RBP25.27■■□□□ 1.64
PMS1-214ENST00000446877 CCR5P51681 352 aa25.27■■□□□ 1.64
PMS1-214ENST00000446877 C19orf57Q0VDD7 668 aa25.27■■□□□ 1.64
PMS1-214ENST00000446877 DNAJC3Q13217 504 aa25.27■■□□□ 1.64
PMS1-214ENST00000446877 ARID5BQ14865 1188 aa25.27■■□□□ 1.64
PMS1-214ENST00000446877 C9orf64Q5T6V5 341 aa25.27■■□□□ 1.64
PMS1-214ENST00000446877 RNF219Q5W0B1 726 aaPredicted RBP25.27■■□□□ 1.64
PMS1-214ENST00000446877 LCLAT1Q6UWP7 414 aa25.27■■□□□ 1.64
PMS1-214ENST00000446877 EID2Q8N6I1 236 aa25.27■■□□□ 1.64
PMS1-214ENST00000446877 CCDC34Q96HJ3 373 aa25.27■■□□□ 1.64
PMS1-214ENST00000446877 ADAMTS1Q9UHI8 967 aa25.27■■□□□ 1.64
PMS1-214ENST00000446877 TPX2Q9ULW0 747 aaKnown RBP25.27■■□□□ 1.64
PMS1-214ENST00000446877 CBX4O00257 560 aa25.26■■□□□ 1.63
PMS1-214ENST00000446877 PIK3R2O00459 728 aa25.26■■□□□ 1.63
PMS1-214ENST00000446877 RRP8O43159 456 aaKnown RBP25.26■■□□□ 1.63
PMS1-214ENST00000446877 LTFP02788 710 aa25.26■■□□□ 1.63
PMS1-214ENST00000446877 WNT1P04628 370 aa25.26■■□□□ 1.63
PMS1-214ENST00000446877 SRPRAP08240 638 aaKnown RBP25.26■■□□□ 1.63
PMS1-214ENST00000446877 RPS24P62847 133 aaKnown RBP25.26■■□□□ 1.63
PMS1-214ENST00000446877 KRT85P78386 507 aa25.26■■□□□ 1.63
PMS1-214ENST00000446877 LRMPQ12912 555 aa25.26■■□□□ 1.63
PMS1-214ENST00000446877 PKDCCQ504Y2 493 aa25.26■■□□□ 1.63
PMS1-214ENST00000446877 PMF1Q6P1K2 205 aa25.26■■□□□ 1.63
PMS1-214ENST00000446877 SLC35F5Q8WV83 523 aa25.26■■□□□ 1.63
PMS1-214ENST00000446877 SERAC1Q96JX3 654 aa25.26■■□□□ 1.63
PMS1-214ENST00000446877 MRGPRX3Q96LB0 322 aa25.26■■□□□ 1.63
PMS1-214ENST00000446877 EBF2Q9HAK2 575 aa25.26■■□□□ 1.63
PMS1-214ENST00000446877 INTS6Q9UL03 887 aaKnown RBP25.26■■□□□ 1.63
PMS1-214ENST00000446877 ERVW-1Q9UQF0 538 aa25.26■■□□□ 1.63
PMS1-214ENST00000446877 FAM237AA0A1B0GTK4 181 aa25.25■■□□□ 1.63
PMS1-214ENST00000446877 EDDM13A0A1B0GTR0 161 aa25.25■■□□□ 1.63
PMS1-214ENST00000446877 TTC34A8MYJ7 566 aa25.25■■□□□ 1.63
PMS1-214ENST00000446877 PAEPP09466 180 aa25.25■■□□□ 1.63
PMS1-214ENST00000446877 GOT1P17174 413 aa25.25■■□□□ 1.63
PMS1-214ENST00000446877 PSMD8P48556 350 aa25.25■■□□□ 1.63
PMS1-214ENST00000446877 TARDBPQ13148 414 aaKnown RBP eCLIP25.25■■□□□ 1.63
PMS1-214ENST00000446877 KCNJ12Q14500 433 aa25.25■■□□□ 1.63
PMS1-214ENST00000446877 SHBQ15464 509 aa25.25■■□□□ 1.63
PMS1-214ENST00000446877 SND1Q7KZF4 910 aaKnown RBP eCLIP25.25■■□□□ 1.63
PMS1-214ENST00000446877 SMYD4Q8IYR2 804 aaPredicted RBP25.25■■□□□ 1.63
PMS1-214ENST00000446877 OR14C36Q8NHC7 312 aa25.25■■□□□ 1.63
PMS1-214ENST00000446877 TSG101Q99816 390 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms