RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 CTXN3Q4LDR2 81 aa17.93■□□□□ 0.46
SMC6-206ENST00000446852 ARTNQ5T4W7 220 aa17.93■□□□□ 0.46
SMC6-206ENST00000446852 NUGGCQ68CJ6 796 aa17.93■□□□□ 0.46
SMC6-206ENST00000446852 PID1Q7Z2X4 250 aa17.93■□□□□ 0.46
SMC6-206ENST00000446852 CRIPAKQ8N1N5 446 aa17.93■□□□□ 0.46
SMC6-206ENST00000446852 PPM1NQ8N819 430 aa17.93■□□□□ 0.46
SMC6-206ENST00000446852 HDAC11Q96DB2 347 aa17.93■□□□□ 0.46
SMC6-206ENST00000446852 PAIP2Q9BPZ3 127 aaKnown RBP17.93■□□□□ 0.46
SMC6-206ENST00000446852 SSU72Q9NP77 194 aaKnown RBP17.93■□□□□ 0.46
SMC6-206ENST00000446852 IKBKGQ9Y6K9 419 aa17.93■□□□□ 0.46
SMC6-206ENST00000446852 PITPNM1O00562 1244 aa17.93■□□□□ 0.46
SMC6-206ENST00000446852 PAGE1O75459 146 aa17.93■□□□□ 0.46
SMC6-206ENST00000446852 MLNP12872 115 aa17.93■□□□□ 0.46
SMC6-206ENST00000446852 PBX3P40426 434 aa17.93■□□□□ 0.46
SMC6-206ENST00000446852 SLC11A1P49279 550 aa17.93■□□□□ 0.46
SMC6-206ENST00000446852 ZKSCAN8Q15776 578 aaPredicted RBP17.93■□□□□ 0.46
SMC6-206ENST00000446852 BRMS1LQ5PSV4 323 aa17.93■□□□□ 0.46
SMC6-206ENST00000446852 LRRC8BQ6P9F7 803 aa17.93■□□□□ 0.46
SMC6-206ENST00000446852 YTHDF3Q7Z739 585 aaKnown RBP17.93■□□□□ 0.46
SMC6-206ENST00000446852 LRRC6Q86X45 466 aa17.93■□□□□ 0.46
SMC6-206ENST00000446852 CTAGE3PQ8IX95 158 aa17.93■□□□□ 0.46
SMC6-206ENST00000446852 ATAD1Q8NBU5 361 aa17.93■□□□□ 0.46
SMC6-206ENST00000446852 CELF6Q96J87 481 aaKnown RBP17.93■□□□□ 0.46
SMC6-206ENST00000446852 C8orf48Q96LL4 319 aa17.93■□□□□ 0.46
SMC6-206ENST00000446852 NSRP1Q9H0G5 558 aaKnown RBP17.93■□□□□ 0.46
SMC6-206ENST00000446852 KLHL8Q9P2G9 620 aaPredicted RBP17.93■□□□□ 0.46
SMC6-206ENST00000446852 MICAL3Q7RTP6 2002 aa17.92■□□□□ 0.46
SMC6-206ENST00000446852 TRDMT1O14717 391 aaKnown RBP17.92■□□□□ 0.46
SMC6-206ENST00000446852 UGT1A9O60656 530 aa17.92■□□□□ 0.46
SMC6-206ENST00000446852 PQBP1O60828 265 aaKnown RBP17.92■□□□□ 0.46
SMC6-206ENST00000446852 TAC1P20366 129 aa17.92■□□□□ 0.46
SMC6-206ENST00000446852 SERPINB6P35237 376 aa17.92■□□□□ 0.46
SMC6-206ENST00000446852 SARNPP82979 210 aaKnown RBP17.92■□□□□ 0.46
SMC6-206ENST00000446852 IL9RQ01113 521 aa17.92■□□□□ 0.46
SMC6-206ENST00000446852 ZBTB17Q13105 803 aa17.92■□□□□ 0.46
SMC6-206ENST00000446852 OLIG2Q13516 323 aa17.92■□□□□ 0.46
SMC6-206ENST00000446852 SLC26A11Q86WA9 606 aa17.92■□□□□ 0.46
SMC6-206ENST00000446852 NUP93Q8N1F7 819 aa17.92■□□□□ 0.46
SMC6-206ENST00000446852 CCDC197Q8NCU1 140 aa17.92■□□□□ 0.46
SMC6-206ENST00000446852 GSDMBQ8TAX9 411 aa17.92■□□□□ 0.46
SMC6-206ENST00000446852 GPR152Q8TDT2 470 aa17.92■□□□□ 0.46
SMC6-206ENST00000446852 SEPT8Q92599 483 aa17.92■□□□□ 0.46
SMC6-206ENST00000446852 DPF3Q92784 378 aa17.92■□□□□ 0.46
SMC6-206ENST00000446852 SCLYQ96I15 445 aa17.92■□□□□ 0.46
SMC6-206ENST00000446852 SERAC1Q96JX3 654 aa17.92■□□□□ 0.46
SMC6-206ENST00000446852 UGT1A7Q9HAW7 530 aa17.92■□□□□ 0.46
SMC6-206ENST00000446852 UGT1A10Q9HAW8 530 aa17.92■□□□□ 0.46
SMC6-206ENST00000446852 UGT1A8Q9HAW9 530 aa17.92■□□□□ 0.46
SMC6-206ENST00000446852 SCML2Q9UQR0 700 aa17.92■□□□□ 0.46
SMC6-206ENST00000446852 PCDHB5Q9Y5E4 795 aa17.92■□□□□ 0.46
SMC6-206ENST00000446852 DOCK4Q8N1I0 1966 aa17.92■□□□□ 0.46
SMC6-206ENST00000446852 IQANK1A0A1B0GTG1 560 aa17.92■□□□□ 0.46
SMC6-206ENST00000446852 WDR27A2RRH5 827 aa17.92■□□□□ 0.46
SMC6-206ENST00000446852 TRIM66O15016 1216 aa17.92■□□□□ 0.46
SMC6-206ENST00000446852 GSTA2P09210 222 aa17.92■□□□□ 0.46
SMC6-206ENST00000446852 CSH1P0DML2 217 aa17.92■□□□□ 0.46
SMC6-206ENST00000446852 CSH2P0DML3 217 aa17.92■□□□□ 0.46
SMC6-206ENST00000446852 CCR1P32246 355 aa17.92■□□□□ 0.46
SMC6-206ENST00000446852 CYP2C18P33260 490 aa17.92■□□□□ 0.46
SMC6-206ENST00000446852 SPARCL1Q14515 664 aa17.92■□□□□ 0.46
SMC6-206ENST00000446852 MTFR1Q15390 333 aa17.92■□□□□ 0.46
SMC6-206ENST00000446852 RWDD4Q6NW29 188 aaKnown RBP17.92■□□□□ 0.46
SMC6-206ENST00000446852 BANPQ8N9N5 519 aa17.92■□□□□ 0.46
SMC6-206ENST00000446852 STAMBPL1Q96FJ0 436 aa17.92■□□□□ 0.46
SMC6-206ENST00000446852 DEFB118Q96PH6 123 aa17.92■□□□□ 0.46
SMC6-206ENST00000446852 HAPLN3Q96S86 360 aa17.92■□□□□ 0.46
SMC6-206ENST00000446852 PAK6Q9NQU5 681 aaPredicted RBP17.92■□□□□ 0.46
SMC6-206ENST00000446852 SAMD15Q9P1V8 674 aa17.92■□□□□ 0.46
SMC6-206ENST00000446852 PCDHA11Q9Y5I1 949 aa17.92■□□□□ 0.46
SMC6-206ENST00000446852 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.91■□□□□ 0.46
SMC6-206ENST00000446852 SOAT2O75908 522 aa17.91■□□□□ 0.46
SMC6-206ENST00000446852 KIAA0754O94854 1291 aa17.91■□□□□ 0.46
SMC6-206ENST00000446852 OAS1P00973 400 aaKnown RBP17.91■□□□□ 0.46
SMC6-206ENST00000446852 MX2P20592 715 aa17.91■□□□□ 0.46
SMC6-206ENST00000446852 FGFR3P22607 806 aa17.91■□□□□ 0.46
SMC6-206ENST00000446852 CD68P34810 354 aaPredicted RBP17.91■□□□□ 0.46
SMC6-206ENST00000446852 SESN2P58004 480 aaPredicted RBP17.91■□□□□ 0.46
SMC6-206ENST00000446852 MANEALQ5VSG8 457 aa17.91■□□□□ 0.46
SMC6-206ENST00000446852 TMEM173Q86WV6 379 aaPredicted RBP17.91■□□□□ 0.46
SMC6-206ENST00000446852 ARNTL2Q8WYA1 636 aa17.91■□□□□ 0.46
SMC6-206ENST00000446852 SEZ6LQ9BYH1 1024 aa17.91■□□□□ 0.46
SMC6-206ENST00000446852 BRD8Q9H0E9 1235 aa17.91■□□□□ 0.46
SMC6-206ENST00000446852 C12orf65Q9H3J6 166 aaKnown RBP17.91■□□□□ 0.46
SMC6-206ENST00000446852 LRFN2Q9ULH4 789 aa17.91■□□□□ 0.46
SMC6-206ENST00000446852 MKI67P46013 3256 aaKnown RBP17.91■□□□□ 0.46
SMC6-206ENST00000446852 FAM159BA6NKW6 160 aa17.91■□□□□ 0.46
SMC6-206ENST00000446852 NT5C1B-RDH14C9J2C7 533 aa17.91■□□□□ 0.46
SMC6-206ENST00000446852 ZBTB24O43167 697 aaPredicted RBP17.91■□□□□ 0.46
SMC6-206ENST00000446852 SNX3O60493 162 aa17.91■□□□□ 0.46
SMC6-206ENST00000446852 MGAT1P26572 445 aa17.91■□□□□ 0.46
SMC6-206ENST00000446852 ZNF280DQ6N043 979 aa17.91■□□□□ 0.46
SMC6-206ENST00000446852 RSPO2Q6UXX9 243 aaPredicted RBP17.91■□□□□ 0.46
SMC6-206ENST00000446852 SH2D5Q6ZV89 423 aa17.91■□□□□ 0.46
SMC6-206ENST00000446852 UNC5BQ8IZJ1 945 aa17.91■□□□□ 0.46
SMC6-206ENST00000446852 ZSCAN18Q8TBC5 510 aaPredicted RBP17.91■□□□□ 0.46
SMC6-206ENST00000446852 SPOCK2Q92563 424 aa17.91■□□□□ 0.46
SMC6-206ENST00000446852 AGAP3Q96P47 875 aa17.91■□□□□ 0.46
SMC6-206ENST00000446852 MRPL42Q9Y6G3 142 aaKnown RBP17.91■□□□□ 0.46
SMC6-206ENST00000446852 MT-ND3P03897 115 aa17.9■□□□□ 0.46
SMC6-206ENST00000446852 ALDH2P05091 517 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms