RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 ZBTB24O43167 697 aaPredicted RBP9.78□□□□□ -0.84
COL6A4P1-201ENST00000446690 SPAG6O75602 509 aa9.78□□□□□ -0.84
COL6A4P1-201ENST00000446690 COL6A1P12109 1028 aa9.78□□□□□ -0.84
COL6A4P1-201ENST00000446690 PTPN3P26045 913 aa9.78□□□□□ -0.84
COL6A4P1-201ENST00000446690 SERPINB6P35237 376 aa9.78□□□□□ -0.84
COL6A4P1-201ENST00000446690 WDR4P57081 412 aaKnown RBP9.78□□□□□ -0.84
COL6A4P1-201ENST00000446690 IL9RQ01113 521 aa9.78□□□□□ -0.84
COL6A4P1-201ENST00000446690 FAAP100Q0VG06 881 aa9.78□□□□□ -0.84
COL6A4P1-201ENST00000446690 OLIG2Q13516 323 aa9.78□□□□□ -0.84
COL6A4P1-201ENST00000446690 SMAD1Q15797 465 aaKnown RBP9.78□□□□□ -0.84
COL6A4P1-201ENST00000446690 ZNF280DQ6N043 979 aa9.78□□□□□ -0.84
COL6A4P1-201ENST00000446690 OTUD6BQ8N6M0 293 aa9.78□□□□□ -0.84
COL6A4P1-201ENST00000446690 SGSM3Q96HU1 749 aa9.78□□□□□ -0.84
COL6A4P1-201ENST00000446690 FCRL2Q96LA5 508 aaPredicted RBP9.78□□□□□ -0.84
COL6A4P1-201ENST00000446690 DHRS4Q9BTZ2 278 aa9.78□□□□□ -0.84
COL6A4P1-201ENST00000446690 NSRP1Q9H0G5 558 aaKnown RBP9.78□□□□□ -0.84
COL6A4P1-201ENST00000446690 HIPK3Q9H422 1215 aa9.78□□□□□ -0.84
COL6A4P1-201ENST00000446690 CCDC134Q9H6E4 229 aa9.78□□□□□ -0.84
COL6A4P1-201ENST00000446690 FGFR1OP2Q9NVK5 253 aa9.78□□□□□ -0.84
COL6A4P1-201ENST00000446690 FETUBQ9UGM5 382 aa9.78□□□□□ -0.84
COL6A4P1-201ENST00000446690 SMG5Q9UPR3 1016 aaKnown RBP9.78□□□□□ -0.84
COL6A4P1-201ENST00000446690 TTLL3Q9Y4R7 772 aa9.78□□□□□ -0.84
COL6A4P1-201ENST00000446690 SDR42E2A6NKP2 422 aa9.78□□□□□ -0.84
COL6A4P1-201ENST00000446690 USP12O75317 370 aa9.78□□□□□ -0.84
COL6A4P1-201ENST00000446690 IGLV3-25P01717 112 aa9.78□□□□□ -0.84
COL6A4P1-201ENST00000446690 APOEP02649 317 aa9.78□□□□□ -0.84
COL6A4P1-201ENST00000446690 MX2P20592 715 aa9.78□□□□□ -0.84
COL6A4P1-201ENST00000446690 MGAT1P26572 445 aa9.78□□□□□ -0.84
COL6A4P1-201ENST00000446690 GARSP41250 739 aaKnown RBP9.78□□□□□ -0.84
COL6A4P1-201ENST00000446690 RASA2Q15283 850 aa9.78□□□□□ -0.84
COL6A4P1-201ENST00000446690 FUT10Q6P4F1 479 aa9.78□□□□□ -0.84
COL6A4P1-201ENST00000446690 TRMT10BQ6PF06 316 aaKnown RBP9.78□□□□□ -0.84
COL6A4P1-201ENST00000446690 TAS1R1Q7RTX1 841 aa9.78□□□□□ -0.84
COL6A4P1-201ENST00000446690 MON1AQ86VX9 555 aa9.78□□□□□ -0.84
COL6A4P1-201ENST00000446690 TMEM173Q86WV6 379 aaPredicted RBP9.78□□□□□ -0.84
COL6A4P1-201ENST00000446690 LRRC6Q86X45 466 aa9.78□□□□□ -0.84
COL6A4P1-201ENST00000446690 SPATS2Q86XZ4 545 aaKnown RBP9.78□□□□□ -0.84
COL6A4P1-201ENST00000446690 USP33Q8TEY7 942 aa9.78□□□□□ -0.84
COL6A4P1-201ENST00000446690 SLC44A1Q8WWI5 657 aa9.78□□□□□ -0.84
COL6A4P1-201ENST00000446690 LRRC39Q96DD0 335 aa9.78□□□□□ -0.84
COL6A4P1-201ENST00000446690 STAMBPL1Q96FJ0 436 aa9.78□□□□□ -0.84
COL6A4P1-201ENST00000446690 FUBP3Q96I24 572 aaKnown RBP eCLIP9.78□□□□□ -0.84
COL6A4P1-201ENST00000446690 OSBPL2Q9H1P3 480 aa9.78□□□□□ -0.84
COL6A4P1-201ENST00000446690 C12orf65Q9H3J6 166 aaKnown RBP9.78□□□□□ -0.84
COL6A4P1-201ENST00000446690 SMOC2Q9H3U7 446 aa9.78□□□□□ -0.84
COL6A4P1-201ENST00000446690 FBXO44Q9H4M3 255 aa9.78□□□□□ -0.84
COL6A4P1-201ENST00000446690 MARCH5Q9NX47 278 aa9.78□□□□□ -0.84
COL6A4P1-201ENST00000446690 ARHGEF38Q9NXL2 777 aa9.78□□□□□ -0.84
COL6A4P1-201ENST00000446690 GMIPQ9P107 970 aa9.78□□□□□ -0.84
COL6A4P1-201ENST00000446690 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 WDR91A4D1P6 747 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 PITPNM1O00562 1244 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 TRDMT1O14717 391 aaKnown RBP9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 PRPF4O43172 522 aaKnown RBP eCLIP9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 UGT1A9O60656 530 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 TBX18O95935 607 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 JCHAINP01591 159 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 CCL5P13501 91 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 CYP2C18P33260 490 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 MAGEA3P43357 314 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 TUBP50607 506 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 PPIDQ08752 370 aaKnown RBP9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 EFEMP1Q12805 493 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 SLC1A5Q15758 541 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 BRMS1LQ5PSV4 323 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 RTP2Q5QGT7 225 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 HHATQ5VTY9 493 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 LRRC8BQ6P9F7 803 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 RSPO2Q6UXX9 243 aaPredicted RBP9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 RNF19BQ6ZMZ0 732 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 ARHGAP36Q6ZRI8 547 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 BEND5Q7L4P6 421 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 SLC26A11Q86WA9 606 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 NPAS4Q8IUM7 802 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 SUGP1Q8IWZ8 645 aaKnown RBP9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 ANKS4BQ8N8V4 417 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 CCDC197Q8NCU1 140 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 GSDMBQ8TAX9 411 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 C8orf48Q96LL4 319 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 MAGEB18Q96M61 343 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 HAPLN3Q96S86 360 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 UGT1A7Q9HAW7 530 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 UGT1A10Q9HAW8 530 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 UGT1A8Q9HAW9 530 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 PLAC1Q9HBJ0 212 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 UBP1Q9NZI7 540 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 SCML2Q9UQR0 700 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 PCDHA11Q9Y5I1 949 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 RAD54BQ9Y620 910 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 GOLGA6L7A0A1B0GV03 622 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 OR6C75A6NL08 312 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 TYROBPO43914 113 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 GALTP07902 379 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 HMBSP08397 361 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 PYGBP11216 843 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 YWHAQP27348 245 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 FOXN2P32314 431 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 ZNF135P52742 658 aaPredicted RBP9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 CDK16Q00536 496 aa9.77□□□□□ -0.85
COL6A4P1-201ENST00000446690 GALNT2Q10471 571 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms