RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 ABCE1P61221 599 aaKnown RBP14.59□□□□□ -0.07
ERCC3-203ENST00000445889 TMEM132DQ14C87 1099 aa14.59□□□□□ -0.07
ERCC3-203ENST00000445889 TLR1Q15399 786 aa14.59□□□□□ -0.07
ERCC3-203ENST00000445889 SLC5A9Q2M3M2 681 aa14.59□□□□□ -0.07
ERCC3-203ENST00000445889 AAGABQ6PD74 315 aa14.59□□□□□ -0.07
ERCC3-203ENST00000445889 LCLAT1Q6UWP7 414 aa14.59□□□□□ -0.07
ERCC3-203ENST00000445889 ARCQ7LC44 396 aa14.59□□□□□ -0.07
ERCC3-203ENST00000445889 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.59□□□□□ -0.072e-6■□□□□ 9.5
ERCC3-203ENST00000445889 NAT14Q8WUY8 206 aa14.59□□□□□ -0.07
ERCC3-203ENST00000445889 UBP1Q9NZI7 540 aa14.59□□□□□ -0.07
ERCC3-203ENST00000445889 ATP9BO43861 1147 aa14.59□□□□□ -0.07
ERCC3-203ENST00000445889 HSPA4LO95757 839 aa14.59□□□□□ -0.07
ERCC3-203ENST00000445889 CPA3P15088 417 aa14.59□□□□□ -0.07
ERCC3-203ENST00000445889 TPH1P17752 444 aa14.59□□□□□ -0.07
ERCC3-203ENST00000445889 OAZ1P54368 228 aa14.59□□□□□ -0.07
ERCC3-203ENST00000445889 LRRC23Q53EV4 343 aaPredicted RBP14.59□□□□□ -0.07
ERCC3-203ENST00000445889 CDKL3Q8IVW4 592 aaPredicted RBP14.59□□□□□ -0.07
ERCC3-203ENST00000445889 SULF1Q8IWU6 871 aa14.59□□□□□ -0.07
ERCC3-203ENST00000445889 DCLK2Q8N568 766 aa14.59□□□□□ -0.07
ERCC3-203ENST00000445889 MCUQ8NE86 351 aa14.59□□□□□ -0.07
ERCC3-203ENST00000445889 OR52K1Q8NGK4 314 aa14.59□□□□□ -0.07
ERCC3-203ENST00000445889 PIP4K2CQ8TBX8 421 aa14.59□□□□□ -0.07
ERCC3-203ENST00000445889 ATP2A3Q93084 1043 aa14.59□□□□□ -0.07
ERCC3-203ENST00000445889 FAM149B1Q96BN6 582 aa14.59□□□□□ -0.07
ERCC3-203ENST00000445889 DDX18Q9NVP1 670 aaKnown RBP14.59□□□□□ -0.07
ERCC3-203ENST00000445889 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.59□□□□□ -0.07
ERCC3-203ENST00000445889 H3BNX3 289 aa14.59□□□□□ -0.07
ERCC3-203ENST00000445889 MFSD11O43934 449 aa14.59□□□□□ -0.07
ERCC3-203ENST00000445889 COX4I1P13073 169 aa14.59□□□□□ -0.07
ERCC3-203ENST00000445889 ARSAP15289 507 aa14.59□□□□□ -0.07
ERCC3-203ENST00000445889 HNRNPDQ14103 355 aaKnown RBP14.59□□□□□ -0.07
ERCC3-203ENST00000445889 NCBP2-AS2Q69YL0 99 aa14.59□□□□□ -0.07
ERCC3-203ENST00000445889 ICA1LQ8NDH6 482 aa14.59□□□□□ -0.07
ERCC3-203ENST00000445889 OPTNQ96CV9 577 aa14.59□□□□□ -0.07
ERCC3-203ENST00000445889 MPP4Q96JB8 637 aa14.59□□□□□ -0.07
ERCC3-203ENST00000445889 CNBD2Q96M20 576 aa14.59□□□□□ -0.07
ERCC3-203ENST00000445889 SNX15Q9NRS6 342 aa14.59□□□□□ -0.07
ERCC3-203ENST00000445889 GGA3Q9NZ52 723 aa14.59□□□□□ -0.07
ERCC3-203ENST00000445889 TRIP11Q15643 1979 aa14.59□□□□□ -0.07
ERCC3-203ENST00000445889 COL11A1P12107 1806 aaPredicted RBP14.58□□□□□ -0.07
ERCC3-203ENST00000445889 BRCA2P51587 3418 aa14.58□□□□□ -0.07
ERCC3-203ENST00000445889 A0A1B0GTW7 788 aa14.58□□□□□ -0.08
ERCC3-203ENST00000445889 RNF103O00237 685 aa14.58□□□□□ -0.08
ERCC3-203ENST00000445889 CCNT2O60583 730 aaKnown RBP14.58□□□□□ -0.08
ERCC3-203ENST00000445889 GLRA3O75311 464 aa14.58□□□□□ -0.08
ERCC3-203ENST00000445889 GCATO75600 419 aa14.58□□□□□ -0.08
ERCC3-203ENST00000445889 NELFEP18615 380 aaKnown RBP14.58□□□□□ -0.08
ERCC3-203ENST00000445889 SERPINB9P50453 376 aa14.58□□□□□ -0.08
ERCC3-203ENST00000445889 ITGA7Q13683 1181 aa14.58□□□□□ -0.08
ERCC3-203ENST00000445889 PDCD2Q16342 344 aaPredicted RBP14.58□□□□□ -0.08
ERCC3-203ENST00000445889 ZNF618Q5T7W0 954 aa14.58□□□□□ -0.08
ERCC3-203ENST00000445889 PGM2L1Q6PCE3 622 aa14.58□□□□□ -0.08
ERCC3-203ENST00000445889 SESTD1Q86VW0 696 aa14.58□□□□□ -0.08
ERCC3-203ENST00000445889 FBXW8Q8N3Y1 598 aa14.58□□□□□ -0.08
ERCC3-203ENST00000445889 P2RY11Q96G91 374 aa14.58□□□□□ -0.08
ERCC3-203ENST00000445889 OLFM3Q96PB7 478 aa14.58□□□□□ -0.08
ERCC3-203ENST00000445889 TBCBQ99426 244 aa14.58□□□□□ -0.08
ERCC3-203ENST00000445889 UBAP1Q9NZ09 502 aa14.58□□□□□ -0.08
ERCC3-203ENST00000445889 LMO2P25791 158 aa14.58□□□□□ -0.08
ERCC3-203ENST00000445889 AVPR1AP37288 418 aa14.58□□□□□ -0.08
ERCC3-203ENST00000445889 HSP90AA5PQ58FG0 334 aa14.58□□□□□ -0.08
ERCC3-203ENST00000445889 NXNQ6DKJ4 435 aa14.58□□□□□ -0.08
ERCC3-203ENST00000445889 PID1Q7Z2X4 250 aa14.58□□□□□ -0.08
ERCC3-203ENST00000445889 DNERQ8NFT8 737 aa14.58□□□□□ -0.08
ERCC3-203ENST00000445889 ACTRT2Q8TDY3 377 aa14.58□□□□□ -0.08
ERCC3-203ENST00000445889 CDKL2Q92772 493 aa14.58□□□□□ -0.08
ERCC3-203ENST00000445889 C18orf25Q96B23 403 aaPredicted RBP14.58□□□□□ -0.08
ERCC3-203ENST00000445889 MFSD3Q96ES6 412 aa14.58□□□□□ -0.08
ERCC3-203ENST00000445889 PHF12Q96QT6 1004 aa14.58□□□□□ -0.08
ERCC3-203ENST00000445889 CDRT15Q96T59 188 aa14.58□□□□□ -0.08
ERCC3-203ENST00000445889 PDZD7Q9H5P4 517 aa14.58□□□□□ -0.08
ERCC3-203ENST00000445889 COPS7BQ9H9Q2 264 aaPredicted RBP14.58□□□□□ -0.08
ERCC3-203ENST00000445889 TNFSF13BQ9Y275 285 aa14.58□□□□□ -0.08
ERCC3-203ENST00000445889 SSX2IPQ9Y2D8 614 aa14.58□□□□□ -0.08
ERCC3-203ENST00000445889 C15orf38-AP3S2A0A0A6YYH1 394 aa14.57□□□□□ -0.08
ERCC3-203ENST00000445889 TRPA1O75762 1119 aa14.57□□□□□ -0.08
ERCC3-203ENST00000445889 MPSTP25325 297 aa14.57□□□□□ -0.08
ERCC3-203ENST00000445889 PMLP29590 882 aa14.57□□□□□ -0.08
ERCC3-203ENST00000445889 NIPAL4Q0D2K0 466 aa14.57□□□□□ -0.08
ERCC3-203ENST00000445889 KLF10Q13118 480 aa14.57□□□□□ -0.08
ERCC3-203ENST00000445889 ARPINQ7Z6K5 226 aa14.57□□□□□ -0.08
ERCC3-203ENST00000445889 STRA8Q7Z7C7 330 aa14.57□□□□□ -0.08
ERCC3-203ENST00000445889 SDCCAG8Q86SQ7 713 aaPredicted RBP14.57□□□□□ -0.08
ERCC3-203ENST00000445889 SNX32Q86XE0 403 aa14.57□□□□□ -0.08
ERCC3-203ENST00000445889 SNX31Q8N9S9 440 aa14.57□□□□□ -0.08
ERCC3-203ENST00000445889 LRRC39Q96DD0 335 aa14.57□□□□□ -0.08
ERCC3-203ENST00000445889 CMTM5Q96DZ9 223 aa14.57□□□□□ -0.08
ERCC3-203ENST00000445889 ZNF670Q9BS34 389 aa14.57□□□□□ -0.08
ERCC3-203ENST00000445889 NUF2Q9BZD4 464 aa14.57□□□□□ -0.08
ERCC3-203ENST00000445889 C2orf40Q9H1Z8 148 aa14.57□□□□□ -0.08
ERCC3-203ENST00000445889 MKS1Q9NXB0 559 aa14.57□□□□□ -0.08
ERCC3-203ENST00000445889 FIS1Q9Y3D6 152 aa14.57□□□□□ -0.08
ERCC3-203ENST00000445889 PEX1O43933 1283 aa14.57□□□□□ -0.08
ERCC3-203ENST00000445889 JUNP05412 331 aaKnown RBP14.57□□□□□ -0.08
ERCC3-203ENST00000445889 PABPC4LP0CB38 370 aaKnown RBP14.57□□□□□ -0.08
ERCC3-203ENST00000445889 ENO3P13929 434 aaPredicted RBP14.57□□□□□ -0.08
ERCC3-203ENST00000445889 ALDH1A3P47895 512 aa14.57□□□□□ -0.08
ERCC3-203ENST00000445889 CHN2P52757 468 aa14.57□□□□□ -0.08
ERCC3-203ENST00000445889 NME3Q13232 169 aa14.57□□□□□ -0.08
ERCC3-203ENST00000445889 LSAMPQ13449 338 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms