RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 TMEM237Q96Q45 408 aa17.27■□□□□ 0.35
LAPTM4B-201ENST00000445593 PEX19P40855 299 aa17.26■□□□□ 0.35
LAPTM4B-201ENST00000445593 TM4SF4P48230 202 aa17.26■□□□□ 0.35
LAPTM4B-201ENST00000445593 MBTPS1Q14703 1052 aa17.26■□□□□ 0.35
LAPTM4B-201ENST00000445593 TTC39BQ5VTQ0 682 aaPredicted RBP17.26■□□□□ 0.35
LAPTM4B-201ENST00000445593 ARCQ7LC44 396 aa17.26■□□□□ 0.35
LAPTM4B-201ENST00000445593 VSIG1Q86XK7 387 aa17.26■□□□□ 0.35
LAPTM4B-201ENST00000445593 RFWD2Q8NHY2 731 aa17.26■□□□□ 0.35
LAPTM4B-201ENST00000445593 RAET1EQ8TD07 263 aa17.26■□□□□ 0.35
LAPTM4B-201ENST00000445593 AZIN2Q96A70 460 aa17.26■□□□□ 0.35
LAPTM4B-201ENST00000445593 GLT1D1Q96MS3 346 aa17.26■□□□□ 0.35
LAPTM4B-201ENST00000445593 EDF1O60869 148 aaKnown RBP17.26■□□□□ 0.35
LAPTM4B-201ENST00000445593 SNRPAP09012 282 aaKnown RBP17.26■□□□□ 0.35
LAPTM4B-201ENST00000445593 PTPN3P26045 913 aa17.26■□□□□ 0.35
LAPTM4B-201ENST00000445593 TARSP26639 723 aaKnown RBP17.26■□□□□ 0.35
LAPTM4B-201ENST00000445593 RPL9P32969 192 aaKnown RBP17.26■□□□□ 0.35
LAPTM4B-201ENST00000445593 UPF3AQ9H1J1 476 aaKnown RBP17.26■□□□□ 0.35
LAPTM4B-201ENST00000445593 MYLK2Q9H1R3 596 aa17.26■□□□□ 0.35
LAPTM4B-201ENST00000445593 MANSC1Q9H8J5 431 aa17.26■□□□□ 0.35
LAPTM4B-201ENST00000445593 RPS6KL1Q9Y6S9 549 aa17.26■□□□□ 0.35
LAPTM4B-201ENST00000445593 C1QAP02745 245 aa17.26■□□□□ 0.35
LAPTM4B-201ENST00000445593 CKBP12277 381 aa17.26■□□□□ 0.35
LAPTM4B-201ENST00000445593 GRIK3Q13003 919 aa17.26■□□□□ 0.35
LAPTM4B-201ENST00000445593 BTBD8Q5XKL5 378 aa17.26■□□□□ 0.35
LAPTM4B-201ENST00000445593 GLB1LQ6UWU2 654 aa17.26■□□□□ 0.35
LAPTM4B-201ENST00000445593 RNF180Q86T96 592 aa17.26■□□□□ 0.35
LAPTM4B-201ENST00000445593 ANKLE1Q8NAG6 615 aa17.26■□□□□ 0.35
LAPTM4B-201ENST00000445593 APOPT1Q96IL0 206 aa17.26■□□□□ 0.35
LAPTM4B-201ENST00000445593 FERMT1Q9BQL6 677 aa17.26■□□□□ 0.35
LAPTM4B-201ENST00000445593 MPP6Q9NZW5 540 aa17.26■□□□□ 0.35
LAPTM4B-201ENST00000445593 PTCH2Q9Y6C5 1203 aa17.26■□□□□ 0.35
LAPTM4B-201ENST00000445593 NFKB1P19838 968 aa17.25■□□□□ 0.35
LAPTM4B-201ENST00000445593 SAT1P21673 171 aa17.25■□□□□ 0.35
LAPTM4B-201ENST00000445593 PRKD1Q15139 912 aaPredicted RBP17.25■□□□□ 0.35
LAPTM4B-201ENST00000445593 CERCAMQ5T4B2 595 aa17.25■□□□□ 0.35
LAPTM4B-201ENST00000445593 BZW1Q7L1Q6 419 aaKnown RBP17.25■□□□□ 0.35
LAPTM4B-201ENST00000445593 OTOP3Q7RTS5 596 aa17.25■□□□□ 0.35
LAPTM4B-201ENST00000445593 THEM5Q8N1Q8 247 aa17.25■□□□□ 0.35
LAPTM4B-201ENST00000445593 ACBD6Q9BR61 282 aa17.25■□□□□ 0.35
LAPTM4B-201ENST00000445593 HMBSP08397 361 aa17.25■□□□□ 0.35
LAPTM4B-201ENST00000445593 MRPL10Q7Z7H8 261 aaKnown RBP17.25■□□□□ 0.35
LAPTM4B-201ENST00000445593 ZNF669Q96BR6 464 aaPredicted RBP17.25■□□□□ 0.35
LAPTM4B-201ENST00000445593 KLHL29Q96CT2 875 aa17.25■□□□□ 0.35
LAPTM4B-201ENST00000445593 EPAS1Q99814 870 aa17.25■□□□□ 0.35
LAPTM4B-201ENST00000445593 ATXN3LQ9H3M9 355 aa17.25■□□□□ 0.35
LAPTM4B-201ENST00000445593 XAB2Q9HCS7 855 aaKnown RBP17.25■□□□□ 0.35
LAPTM4B-201ENST00000445593 NDFIP2Q9NV92 336 aa17.25■□□□□ 0.35
LAPTM4B-201ENST00000445593 BAIAP2L1Q9UHR4 511 aa17.25■□□□□ 0.35
LAPTM4B-201ENST00000445593 SDR42E2A6NKP2 422 aa17.24■□□□□ 0.35
LAPTM4B-201ENST00000445593 KIF1CO43896 1103 aaKnown RBP17.24■□□□□ 0.35
LAPTM4B-201ENST00000445593 TPSB2P20231 275 aa17.24■□□□□ 0.35
LAPTM4B-201ENST00000445593 TPSAB1Q15661 275 aa17.24■□□□□ 0.35
LAPTM4B-201ENST00000445593 PLEKHG4Q58EX7 1191 aa17.24■□□□□ 0.35
LAPTM4B-201ENST00000445593 RAB41Q5JT25 222 aa17.24■□□□□ 0.35
LAPTM4B-201ENST00000445593 CLLU1OSQ5K130 101 aa17.24■□□□□ 0.35
LAPTM4B-201ENST00000445593 ATAD1Q8NBU5 361 aa17.24■□□□□ 0.35
LAPTM4B-201ENST00000445593 MCUQ8NE86 351 aa17.24■□□□□ 0.35
LAPTM4B-201ENST00000445593 KLHDC9Q8NEP7 349 aa17.24■□□□□ 0.35
LAPTM4B-201ENST00000445593 SPATA22Q8NHS9 363 aa17.24■□□□□ 0.35
LAPTM4B-201ENST00000445593 CASP10Q92851 521 aa17.24■□□□□ 0.35
LAPTM4B-201ENST00000445593 TSPAN18Q96SJ8 248 aa17.24■□□□□ 0.35
LAPTM4B-201ENST00000445593 NMUR1Q9HB89 426 aa17.24■□□□□ 0.35
LAPTM4B-201ENST00000445593 PCDHA11Q9Y5I1 949 aa17.24■□□□□ 0.35
LAPTM4B-201ENST00000445593 HMX2A2RU54 273 aa17.24■□□□□ 0.35
LAPTM4B-201ENST00000445593 OPHN1O60890 802 aa17.24■□□□□ 0.35
LAPTM4B-201ENST00000445593 NCALDP61601 193 aa17.24■□□□□ 0.35
LAPTM4B-201ENST00000445593 DSC3Q14574 896 aa17.24■□□□□ 0.35
LAPTM4B-201ENST00000445593 CYB5D1Q6P9G0 228 aa17.24■□□□□ 0.35
LAPTM4B-201ENST00000445593 ZNF354CQ86Y25 554 aa17.24■□□□□ 0.35
LAPTM4B-201ENST00000445593 PCSK9Q8NBP7 692 aaKnown RBP17.24■□□□□ 0.35
LAPTM4B-201ENST00000445593 PHACTR1Q9C0D0 580 aa17.24■□□□□ 0.35
LAPTM4B-201ENST00000445593 PPCSQ9HAB8 311 aa17.24■□□□□ 0.35
LAPTM4B-201ENST00000445593 GPBP1L1Q9HC44 474 aaPredicted RBP17.24■□□□□ 0.35
LAPTM4B-201ENST00000445593 CD248Q9HCU0 757 aa17.24■□□□□ 0.35
LAPTM4B-201ENST00000445593 KLC4Q9NSK0 619 aa17.24■□□□□ 0.35
LAPTM4B-201ENST00000445593 PRKAG3Q9UGI9 489 aa17.24■□□□□ 0.35
LAPTM4B-201ENST00000445593 CHKBQ9Y259 395 aa17.24■□□□□ 0.35
LAPTM4B-201ENST00000445593 A8MUI8 341 aa17.24■□□□□ 0.35
LAPTM4B-201ENST00000445593 SPAG6O75602 509 aa17.24■□□□□ 0.35
LAPTM4B-201ENST00000445593 CBX6O95503 412 aa17.24■□□□□ 0.35
LAPTM4B-201ENST00000445593 TBX18O95935 607 aa17.24■□□□□ 0.35
LAPTM4B-201ENST00000445593 SERPINB4P48594 390 aa17.24■□□□□ 0.35
LAPTM4B-201ENST00000445593 CRYMQ14894 314 aa17.24■□□□□ 0.35
LAPTM4B-201ENST00000445593 LACTB2Q53H82 288 aaPredicted RBP17.24■□□□□ 0.35
LAPTM4B-201ENST00000445593 PPM1JQ5JR12 505 aa17.24■□□□□ 0.35
LAPTM4B-201ENST00000445593 CCSAPQ6IQ19 270 aaPredicted RBP17.24■□□□□ 0.35
LAPTM4B-201ENST00000445593 TFAP2DQ7Z6R9 452 aa17.24■□□□□ 0.35
LAPTM4B-201ENST00000445593 RASSF3Q86WH2 238 aa17.24■□□□□ 0.35
LAPTM4B-201ENST00000445593 SPNS2Q8IVW8 549 aa17.24■□□□□ 0.35
LAPTM4B-201ENST00000445593 OXNAD1Q96HP4 312 aaPredicted RBP17.24■□□□□ 0.35
LAPTM4B-201ENST00000445593 TSSK1BQ9BXA7 367 aa17.24■□□□□ 0.35
LAPTM4B-201ENST00000445593 SLC12A4Q9UP95 1085 aa17.24■□□□□ 0.35
LAPTM4B-201ENST00000445593 SLC27A5Q9Y2P5 690 aa17.24■□□□□ 0.35
LAPTM4B-201ENST00000445593 A0A1W2PQH9 124 aa17.23■□□□□ 0.35
LAPTM4B-201ENST00000445593 ZNF623O75123 536 aa17.23■□□□□ 0.35
LAPTM4B-201ENST00000445593 FDFT1P37268 417 aa17.23■□□□□ 0.35
LAPTM4B-201ENST00000445593 RAB27AP51159 221 aa17.23■□□□□ 0.35
LAPTM4B-201ENST00000445593 MIB1Q86YT6 1006 aa17.23■□□□□ 0.35
LAPTM4B-201ENST00000445593 LINC01599Q8WXQ3 324 aa17.23■□□□□ 0.35
LAPTM4B-201ENST00000445593 MFSD3Q96ES6 412 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms