RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 NUCKS1Q9H1E3 243 aaKnown RBP16.01■□□□□ 0.15
SEC13-213ENST00000445064 RSPH9Q9H1X1 276 aaPredicted RBP16.01■□□□□ 0.15
SEC13-213ENST00000445064 SGK2Q9HBY8 427 aa16.01■□□□□ 0.15
SEC13-213ENST00000445064 UBE2TQ9NPD8 197 aaPredicted RBP16.01■□□□□ 0.15
SEC13-213ENST00000445064 XPO7Q9UIA9 1087 aaKnown RBP16.01■□□□□ 0.15
SEC13-213ENST00000445064 NCKAP1Q9Y2A7 1128 aa16.01■□□□□ 0.15
SEC13-213ENST00000445064 ANKRD6Q9Y2G4 727 aa16.01■□□□□ 0.15
SEC13-213ENST00000445064 CEP295Q9C0D2 2601 aa16.01■□□□□ 0.15
SEC13-213ENST00000445064 BICDL2A1A5D9 508 aa16■□□□□ 0.15
SEC13-213ENST00000445064 TYW5A2RUC4 315 aaKnown RBP16■□□□□ 0.15
SEC13-213ENST00000445064 CAPN9O14815 690 aa16■□□□□ 0.15
SEC13-213ENST00000445064 SIN3BO75182 1162 aa16■□□□□ 0.15
SEC13-213ENST00000445064 LETM1O95202 739 aaPredicted RBP16■□□□□ 0.15
SEC13-213ENST00000445064 AFPP02771 609 aaKnown RBP16■□□□□ 0.15
SEC13-213ENST00000445064 CAPNS1P04632 268 aa16■□□□□ 0.15
SEC13-213ENST00000445064 CTSOP43234 321 aaPredicted RBP16■□□□□ 0.15
SEC13-213ENST00000445064 ACADSBP45954 432 aa16■□□□□ 0.15
SEC13-213ENST00000445064 SCAPQ12770 1279 aa16■□□□□ 0.15
SEC13-213ENST00000445064 BECN1Q14457 450 aa16■□□□□ 0.15
SEC13-213ENST00000445064 TEAD4Q15561 434 aa16■□□□□ 0.15
SEC13-213ENST00000445064 TTC31Q49AM3 519 aaPredicted RBP16■□□□□ 0.15
SEC13-213ENST00000445064 KCNT1Q5JUK3 1230 aa16■□□□□ 0.15
SEC13-213ENST00000445064 TAC4Q86UU9 113 aa16■□□□□ 0.15
SEC13-213ENST00000445064 CCDC117Q8IWD4 279 aaPredicted RBP16■□□□□ 0.15
SEC13-213ENST00000445064 ZNF557Q8N988 423 aaPredicted RBP16■□□□□ 0.15
SEC13-213ENST00000445064 INTS2Q9H0H0 1204 aaKnown RBP16■□□□□ 0.15
SEC13-213ENST00000445064 OSGEPQ9NPF4 335 aa16■□□□□ 0.15
SEC13-213ENST00000445064 ACP6Q9NPH0 428 aa16■□□□□ 0.15
SEC13-213ENST00000445064 FBXL12Q9NXK8 326 aa16■□□□□ 0.15
SEC13-213ENST00000445064 CYTH4Q9UIA0 394 aa16■□□□□ 0.15
SEC13-213ENST00000445064 CNTN6Q9UQ52 1028 aa16■□□□□ 0.15
SEC13-213ENST00000445064 ERVW-1Q9UQF0 538 aa16■□□□□ 0.15
SEC13-213ENST00000445064 BTBD3Q9Y2F9 522 aa16■□□□□ 0.15
SEC13-213ENST00000445064 PCDHGB2Q9Y5G2 931 aa16■□□□□ 0.15
SEC13-213ENST00000445064 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16■□□□□ 0.15
SEC13-213ENST00000445064 GTF3C3Q9Y5Q9 886 aa16■□□□□ 0.15
SEC13-213ENST00000445064 NUMA1Q14980 2115 aa16■□□□□ 0.15
SEC13-213ENST00000445064 GOLGA8CPA6NN73 597 aa15.99■□□□□ 0.15
SEC13-213ENST00000445064 TTC34A8MYJ7 566 aa15.99■□□□□ 0.15
SEC13-213ENST00000445064 GNA14O95837 355 aa15.99■□□□□ 0.15
SEC13-213ENST00000445064 ASLP04424 464 aa15.99■□□□□ 0.15
SEC13-213ENST00000445064 ATXN1LP0C7T5 689 aaKnown RBP15.99■□□□□ 0.15
SEC13-213ENST00000445064 CD27P26842 260 aa15.99■□□□□ 0.15
SEC13-213ENST00000445064 NNTQ13423 1086 aa15.99■□□□□ 0.15
SEC13-213ENST00000445064 CDH18Q13634 790 aa15.99■□□□□ 0.15
SEC13-213ENST00000445064 SUZ12Q15022 739 aaKnown RBP15.99■□□□□ 0.15
SEC13-213ENST00000445064 HNRNPA1L2Q32P51 320 aaKnown RBP15.99■□□□□ 0.15
SEC13-213ENST00000445064 ZC3H12AQ5D1E8 599 aaKnown RBP15.99■□□□□ 0.15
SEC13-213ENST00000445064 PITRM1Q5JRX3 1037 aa15.99■□□□□ 0.15
SEC13-213ENST00000445064 C9orf64Q5T6V5 341 aa15.99■□□□□ 0.15
SEC13-213ENST00000445064 RAP1GAP2Q684P5 730 aa15.99■□□□□ 0.15
SEC13-213ENST00000445064 KIAA0895LQ68EN5 471 aa15.99■□□□□ 0.15
SEC13-213ENST00000445064 FOXR2Q6PJQ5 311 aa15.99■□□□□ 0.15
SEC13-213ENST00000445064 CCNI2Q6ZMN8 369 aaPredicted RBP15.99■□□□□ 0.15
SEC13-213ENST00000445064 APCDD1Q8J025 514 aa15.99■□□□□ 0.15
SEC13-213ENST00000445064 LGI2Q8N0V4 545 aa15.99■□□□□ 0.15
SEC13-213ENST00000445064 BAHD1Q8TBE0 780 aaPredicted RBP15.99■□□□□ 0.15
SEC13-213ENST00000445064 ZNF606Q8WXB4 792 aa15.99■□□□□ 0.15
SEC13-213ENST00000445064 SLC4A5Q9BY07 1137 aa15.99■□□□□ 0.15
SEC13-213ENST00000445064 NEUROG2Q9H2A3 272 aa15.99■□□□□ 0.15
SEC13-213ENST00000445064 PABPC3Q9H361 631 aaKnown RBP15.99■□□□□ 0.15
SEC13-213ENST00000445064 KIAA1522Q9P206 1035 aaPredicted RBP15.99■□□□□ 0.15
SEC13-213ENST00000445064 SERGEFQ9UGK8 458 aa15.99■□□□□ 0.15
SEC13-213ENST00000445064 SLCO3A1Q9UIG8 710 aa15.99■□□□□ 0.15
SEC13-213ENST00000445064 E5RJQ4 531 aa15.98■□□□□ 0.15
SEC13-213ENST00000445064 H0Y8X5 98 aa15.98■□□□□ 0.15
SEC13-213ENST00000445064 MID1O15344 667 aa15.98■□□□□ 0.15
SEC13-213ENST00000445064 FLRT2O43155 660 aa15.98■□□□□ 0.15
SEC13-213ENST00000445064 PAPSS1O43252 624 aaPredicted RBP15.98■□□□□ 0.15
SEC13-213ENST00000445064 SART1O43290 800 aaKnown RBP15.98■□□□□ 0.15
SEC13-213ENST00000445064 RNASEH1O60930 286 aaKnown RBP15.98■□□□□ 0.15
SEC13-213ENST00000445064 GADD45BO75293 160 aaPredicted RBP15.98■□□□□ 0.15
SEC13-213ENST00000445064 LUC7L3O95232 432 aaKnown RBP15.98■□□□□ 0.15
SEC13-213ENST00000445064 IGHV4-34P06331 123 aa15.98■□□□□ 0.15
SEC13-213ENST00000445064 GRIA4P48058 902 aa15.98■□□□□ 0.15
SEC13-213ENST00000445064 NUMBP49757 651 aa15.98■□□□□ 0.15
SEC13-213ENST00000445064 GALCP54803 685 aa15.98■□□□□ 0.15
SEC13-213ENST00000445064 MARSP56192 900 aaKnown RBP15.98■□□□□ 0.15
SEC13-213ENST00000445064 PITX1P78337 314 aaPredicted RBP15.98■□□□□ 0.15
SEC13-213ENST00000445064 CST6Q15828 149 aa15.98■□□□□ 0.15
SEC13-213ENST00000445064 GJB7Q6PEY0 223 aa15.98■□□□□ 0.15
SEC13-213ENST00000445064 USP30Q70CQ3 517 aa15.98■□□□□ 0.15
SEC13-213ENST00000445064 ADAT2Q7Z6V5 191 aaKnown RBP15.98■□□□□ 0.15
SEC13-213ENST00000445064 MMAAQ8IVH4 418 aaKnown RBP15.98■□□□□ 0.15
SEC13-213ENST00000445064 STK32AQ8WU08 396 aa15.98■□□□□ 0.15
SEC13-213ENST00000445064 RPL10LQ96L21 214 aaKnown RBP15.98■□□□□ 0.15
SEC13-213ENST00000445064 CDC6Q99741 560 aa15.98■□□□□ 0.15
SEC13-213ENST00000445064 ORAI3Q9BRQ5 295 aa15.98■□□□□ 0.15
SEC13-213ENST00000445064 TOR4AQ9NXH8 423 aa15.98■□□□□ 0.15
SEC13-213ENST00000445064 SCML1Q9UN30 329 aa15.98■□□□□ 0.15
SEC13-213ENST00000445064 CEP83Q9Y592 693 aa15.98■□□□□ 0.15
SEC13-213ENST00000445064 A0A1W2PP55 124 aa15.97■□□□□ 0.15
SEC13-213ENST00000445064 TARSL2A2RTX5 802 aaKnown RBP15.97■□□□□ 0.15
SEC13-213ENST00000445064 THAP12O43422 761 aa15.97■□□□□ 0.15
SEC13-213ENST00000445064 MED7O43513 233 aa15.97■□□□□ 0.15
SEC13-213ENST00000445064 RNASEH2AO75792 299 aaKnown RBP15.97■□□□□ 0.15
SEC13-213ENST00000445064 MOCS3O95396 460 aa15.97■□□□□ 0.15
SEC13-213ENST00000445064 TRUB2O95900 331 aaKnown RBP15.97■□□□□ 0.15
SEC13-213ENST00000445064 APOEP02649 317 aa15.97■□□□□ 0.15
SEC13-213ENST00000445064 SRPRAP08240 638 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms