RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 TRIM67Q6ZTA4 783 aa11.93□□□□□ -0.5
HCFC1-203ENST00000444191 NUP93Q8N1F7 819 aa11.93□□□□□ -0.5
HCFC1-203ENST00000444191 ARHGAP18Q8N392 663 aa11.93□□□□□ -0.5
HCFC1-203ENST00000444191 GALNT15Q8N3T1 639 aa11.93□□□□□ -0.5
HCFC1-203ENST00000444191 C18orf25Q96B23 403 aaPredicted RBP11.93□□□□□ -0.5
HCFC1-203ENST00000444191 DPEP3Q9H4B8 488 aa11.93□□□□□ -0.5
HCFC1-203ENST00000444191 CHCHD3Q9NX63 227 aaKnown RBP11.93□□□□□ -0.5
HCFC1-203ENST00000444191 NUDT5Q9UKK9 219 aa11.93□□□□□ -0.5
HCFC1-203ENST00000444191 PIN4Q9Y237 131 aaKnown RBP11.93□□□□□ -0.5
HCFC1-203ENST00000444191 SPDYE16A6NNV3 312 aaPredicted RBP11.93□□□□□ -0.5
HCFC1-203ENST00000444191 TK2O00142 265 aa11.93□□□□□ -0.5
HCFC1-203ENST00000444191 PPEF2O14830 753 aa11.93□□□□□ -0.5
HCFC1-203ENST00000444191 CASQ2O14958 399 aaPredicted RBP11.93□□□□□ -0.5
HCFC1-203ENST00000444191 MAFO75444 373 aaPredicted RBP11.93□□□□□ -0.5
HCFC1-203ENST00000444191 NCAM1P13591 858 aa11.93□□□□□ -0.5
HCFC1-203ENST00000444191 HNRNPLP14866 589 aaKnown RBP eCLIP11.93□□□□□ -0.5
HCFC1-203ENST00000444191 GPD2P43304 727 aa11.93□□□□□ -0.5
HCFC1-203ENST00000444191 IRF9Q00978 393 aa11.93□□□□□ -0.5
HCFC1-203ENST00000444191 SLC6A3Q01959 620 aa11.93□□□□□ -0.5
HCFC1-203ENST00000444191 KRT72Q14CN4 511 aa11.93□□□□□ -0.5
HCFC1-203ENST00000444191 CCDC142Q17RM4 750 aa11.93□□□□□ -0.5
HCFC1-203ENST00000444191 SLC5A9Q2M3M2 681 aa11.93□□□□□ -0.5
HCFC1-203ENST00000444191 CTC1Q2NKJ3 1217 aa11.93□□□□□ -0.5
HCFC1-203ENST00000444191 BNC2Q6ZN30 1099 aaPredicted RBP11.93□□□□□ -0.5
HCFC1-203ENST00000444191 CTU1Q7Z7A3 348 aaKnown RBP11.93□□□□□ -0.5
HCFC1-203ENST00000444191 AMIGO2Q86SJ2 522 aa11.93□□□□□ -0.5
HCFC1-203ENST00000444191 CHSY1Q86X52 802 aa11.93□□□□□ -0.5
HCFC1-203ENST00000444191 RELL1Q8IUW5 271 aa11.93□□□□□ -0.5
HCFC1-203ENST00000444191 SPNS2Q8IVW8 549 aa11.93□□□□□ -0.5
HCFC1-203ENST00000444191 DRAXINQ8NBI3 349 aaPredicted RBP11.93□□□□□ -0.5
HCFC1-203ENST00000444191 CMASQ8NFW8 434 aaPredicted RBP11.93□□□□□ -0.5
HCFC1-203ENST00000444191 TBCBQ99426 244 aa11.93□□□□□ -0.5
HCFC1-203ENST00000444191 NPAS2Q99743 824 aa11.93□□□□□ -0.5
HCFC1-203ENST00000444191 GCOM2Q9BZD3 368 aaPredicted RBP11.93□□□□□ -0.5
HCFC1-203ENST00000444191 SNX15Q9NRS6 342 aa11.93□□□□□ -0.5
HCFC1-203ENST00000444191 EURLQ9NYK6 297 aa11.93□□□□□ -0.5
HCFC1-203ENST00000444191 CACNG4Q9UBN1 327 aa11.93□□□□□ -0.5
HCFC1-203ENST00000444191 POMPQ9Y244 141 aa11.93□□□□□ -0.5
HCFC1-203ENST00000444191 FKBP1AP62942 108 aaKnown RBP11.92□□□□□ -0.5
HCFC1-203ENST00000444191 MPP3Q13368 585 aa11.92□□□□□ -0.5
HCFC1-203ENST00000444191 PDAP1Q13442 181 aaKnown RBP11.92□□□□□ -0.5
HCFC1-203ENST00000444191 LBRQ14739 615 aaKnown RBP11.92□□□□□ -0.5
HCFC1-203ENST00000444191 SEL1L3Q68CR1 1132 aa11.92□□□□□ -0.5
HCFC1-203ENST00000444191 MOB2Q70IA6 237 aa11.92□□□□□ -0.5
HCFC1-203ENST00000444191 DEFB132Q7Z7B7 95 aa11.92□□□□□ -0.5
HCFC1-203ENST00000444191 DPP9Q86TI2 863 aa11.92□□□□□ -0.5
HCFC1-203ENST00000444191 OPTNQ96CV9 577 aa11.92□□□□□ -0.5
HCFC1-203ENST00000444191 ELMO2Q96JJ3 720 aa11.92□□□□□ -0.5
HCFC1-203ENST00000444191 DNAI2Q9GZS0 605 aa11.92□□□□□ -0.5
HCFC1-203ENST00000444191 DDIT4Q9NX09 232 aa11.92□□□□□ -0.5
HCFC1-203ENST00000444191 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.92□□□□□ -0.5
HCFC1-203ENST00000444191 LMCD1Q9NZU5 365 aa11.92□□□□□ -0.5
HCFC1-203ENST00000444191 BCAP29Q9UHQ4 241 aa11.92□□□□□ -0.5
HCFC1-203ENST00000444191 IL18RAPO95256 599 aa11.92□□□□□ -0.5
HCFC1-203ENST00000444191 PLOD1Q02809 727 aaPredicted RBP11.92□□□□□ -0.5
HCFC1-203ENST00000444191 TNFAIP2Q03169 654 aa11.92□□□□□ -0.5
HCFC1-203ENST00000444191 CTBP1Q13363 440 aa11.92□□□□□ -0.5
HCFC1-203ENST00000444191 CYLC2Q14093 348 aaPredicted RBP11.92□□□□□ -0.5
HCFC1-203ENST00000444191 KCNJ11Q14654 390 aa11.92□□□□□ -0.5
HCFC1-203ENST00000444191 R3HDM1Q15032 1099 aaKnown RBP11.92□□□□□ -0.5
HCFC1-203ENST00000444191 PDZD4Q76G19 769 aaPredicted RBP11.92□□□□□ -0.5
HCFC1-203ENST00000444191 TP53INP2Q8IXH6 220 aa11.92□□□□□ -0.5
HCFC1-203ENST00000444191 PNPLA1Q8N8W4 532 aa11.92□□□□□ -0.5
HCFC1-203ENST00000444191 P2RY11Q96G91 374 aa11.92□□□□□ -0.5
HCFC1-203ENST00000444191 OSMRQ99650 979 aa11.92□□□□□ -0.5
HCFC1-203ENST00000444191 SMARCAD1Q9H4L7 1026 aa11.92□□□□□ -0.5
HCFC1-203ENST00000444191 PRMT7Q9NVM4 692 aaPredicted RBP11.92□□□□□ -0.5
HCFC1-203ENST00000444191 MAP3K20Q9NYL2 800 aaKnown RBP11.92□□□□□ -0.5
HCFC1-203ENST00000444191 VANGL2Q9ULK5 521 aa11.92□□□□□ -0.5
HCFC1-203ENST00000444191 C15orf38-AP3S2A0A0A6YYH1 394 aa11.92□□□□□ -0.5
HCFC1-203ENST00000444191 C2CD4BA6NLJ0 364 aa11.92□□□□□ -0.5
HCFC1-203ENST00000444191 ARF4P18085 180 aaPredicted RBP11.92□□□□□ -0.5
HCFC1-203ENST00000444191 HMGB2P26583 209 aaKnown RBP11.92□□□□□ -0.5
HCFC1-203ENST00000444191 GP5P40197 560 aa11.92□□□□□ -0.5
HCFC1-203ENST00000444191 SLC9B1Q4ZJI4 515 aa11.92□□□□□ -0.5
HCFC1-203ENST00000444191 TWF2Q6IBS0 349 aaKnown RBP11.92□□□□□ -0.5
HCFC1-203ENST00000444191 PAOXQ6QHF9 649 aa11.92□□□□□ -0.5
HCFC1-203ENST00000444191 ARPINQ7Z6K5 226 aa11.92□□□□□ -0.5
HCFC1-203ENST00000444191 ADGRF2Q8IZF7 708 aa11.92□□□□□ -0.5
HCFC1-203ENST00000444191 KYQ8NBH2 561 aa11.92□□□□□ -0.5
HCFC1-203ENST00000444191 PDZD8Q8NEN9 1154 aa11.92□□□□□ -0.5
HCFC1-203ENST00000444191 AFG1LQ8WV93 481 aa11.92□□□□□ -0.5
HCFC1-203ENST00000444191 OR52B2Q96RD2 323 aa11.92□□□□□ -0.5
HCFC1-203ENST00000444191 FSD1LQ9BXM9 530 aa11.92□□□□□ -0.5
HCFC1-203ENST00000444191 TMEM134Q9H6X4 195 aa11.92□□□□□ -0.5
HCFC1-203ENST00000444191 SIX4Q9UIU6 781 aa11.92□□□□□ -0.5
HCFC1-203ENST00000444191 SAC3D1A6NKF1 404 aa11.91□□□□□ -0.5
HCFC1-203ENST00000444191 TRDMT1O14717 391 aaKnown RBP11.91□□□□□ -0.5
HCFC1-203ENST00000444191 PLIN3O60664 434 aa11.91□□□□□ -0.5
HCFC1-203ENST00000444191 PLA2G6O60733 806 aa11.91□□□□□ -0.5
HCFC1-203ENST00000444191 TRIM13O60858 407 aa11.91□□□□□ -0.5
HCFC1-203ENST00000444191 VAPBO95292 243 aa11.91□□□□□ -0.5
HCFC1-203ENST00000444191 TGDSO95455 350 aa11.91□□□□□ -0.5
HCFC1-203ENST00000444191 ZFXP17010 805 aaPredicted RBP11.91□□□□□ -0.5
HCFC1-203ENST00000444191 ETV4P43268 484 aa11.91□□□□□ -0.5
HCFC1-203ENST00000444191 IDH3AP50213 366 aa11.91□□□□□ -0.5
HCFC1-203ENST00000444191 MAP3K7CLP57077 242 aa11.91□□□□□ -0.5
HCFC1-203ENST00000444191 TTLL4Q14679 1199 aa11.91□□□□□ -0.5
HCFC1-203ENST00000444191 BEST2Q8NFU1 509 aa11.91□□□□□ -0.5
HCFC1-203ENST00000444191 FAM81AQ8TBF8 368 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms