RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 RAB44Q7Z6P3 723 aaPredicted RBP10.86□□□□□ -0.67
CALD1-210ENST00000443197 LGI2Q8N0V4 545 aa10.86□□□□□ -0.67
CALD1-210ENST00000443197 CRYBG2Q8N1P7 616 aa10.86□□□□□ -0.67
CALD1-210ENST00000443197 CFAP52Q8N1V2 620 aa10.86□□□□□ -0.67
CALD1-210ENST00000443197 CARNMT1Q8N4J0 409 aa10.86□□□□□ -0.67
CALD1-210ENST00000443197 SMG8Q8ND04 991 aaKnown RBP10.86□□□□□ -0.67
CALD1-210ENST00000443197 KCNV2Q8TDN2 545 aa10.86□□□□□ -0.67
CALD1-210ENST00000443197 SCG3Q8WXD2 468 aaKnown RBP10.86□□□□□ -0.67
CALD1-210ENST00000443197 CCDC124Q96CT7 223 aaKnown RBP10.86□□□□□ -0.67
CALD1-210ENST00000443197 ASIC4Q96FT7 647 aa10.86□□□□□ -0.67
CALD1-210ENST00000443197 HIPK3Q9H422 1215 aa10.86□□□□□ -0.67
CALD1-210ENST00000443197 SUDS3Q9H7L9 328 aaPredicted RBP10.86□□□□□ -0.67
CALD1-210ENST00000443197 RRN3Q9NYV6 651 aa10.86□□□□□ -0.67
CALD1-210ENST00000443197 HEY2Q9UBP5 337 aa10.86□□□□□ -0.67
CALD1-210ENST00000443197 SRRDQ9UH36 339 aa10.86□□□□□ -0.67
CALD1-210ENST00000443197 MFHAS1Q9Y4C4 1052 aa10.86□□□□□ -0.67
CALD1-210ENST00000443197 CDY1Q9Y6F8 540 aa10.86□□□□□ -0.67
CALD1-210ENST00000443197 CITO14578 2027 aa10.86□□□□□ -0.67
CALD1-210ENST00000443197 HOXA2O43364 376 aa10.85□□□□□ -0.67
CALD1-210ENST00000443197 PAGE1O75459 146 aa10.85□□□□□ -0.67
CALD1-210ENST00000443197 URODP06132 367 aa10.85□□□□□ -0.67
CALD1-210ENST00000443197 KPNA2P52292 529 aaKnown RBP10.85□□□□□ -0.67
CALD1-210ENST00000443197 DAOAP59103 153 aa10.85□□□□□ -0.67
CALD1-210ENST00000443197 INCA1Q0VD86 236 aa10.85□□□□□ -0.67
CALD1-210ENST00000443197 LRRC8DQ7L1W4 858 aa10.85□□□□□ -0.67
CALD1-210ENST00000443197 NUP93Q8N1F7 819 aa10.85□□□□□ -0.67
CALD1-210ENST00000443197 SLC35B2Q8TB61 432 aa10.85□□□□□ -0.67
CALD1-210ENST00000443197 RAB3IL1Q8TBN0 382 aa10.85□□□□□ -0.67
CALD1-210ENST00000443197 DQX1Q8TE96 717 aaKnown RBP10.85□□□□□ -0.67
CALD1-210ENST00000443197 SPOCK2Q92563 424 aa10.85□□□□□ -0.67
CALD1-210ENST00000443197 RSRC1Q96IZ7 334 aaKnown RBP10.85□□□□□ -0.67
CALD1-210ENST00000443197 KLHL5Q96PQ7 755 aa10.85□□□□□ -0.67
CALD1-210ENST00000443197 PIGVQ9NUD9 493 aa10.85□□□□□ -0.67
CALD1-210ENST00000443197 EFR3BQ9Y2G0 817 aa10.85□□□□□ -0.67
CALD1-210ENST00000443197 E5RI56 91 aa10.85□□□□□ -0.67
CALD1-210ENST00000443197 LRIG2O94898 1065 aa10.85□□□□□ -0.67
CALD1-210ENST00000443197 PIRTP0C851 137 aa10.85□□□□□ -0.67
CALD1-210ENST00000443197 CYP3A5P20815 502 aa10.85□□□□□ -0.67
CALD1-210ENST00000443197 MGAT5Q09328 741 aa10.85□□□□□ -0.67
CALD1-210ENST00000443197 TAF10Q12962 218 aa10.85□□□□□ -0.67
CALD1-210ENST00000443197 PLD1Q13393 1074 aa10.85□□□□□ -0.67
CALD1-210ENST00000443197 CDH18Q13634 790 aa10.85□□□□□ -0.67
CALD1-210ENST00000443197 UBAP2Q5T6F2 1119 aaKnown RBP10.85□□□□□ -0.67
CALD1-210ENST00000443197 RNF219Q5W0B1 726 aaPredicted RBP10.85□□□□□ -0.67
CALD1-210ENST00000443197 LINC00523Q86TU6 105 aa10.85□□□□□ -0.67
CALD1-210ENST00000443197 EVPLQ92817 2033 aa10.85□□□□□ -0.67
CALD1-210ENST00000443197 EXOC2Q96KP1 924 aa10.85□□□□□ -0.67
CALD1-210ENST00000443197 TRIM56Q9BRZ2 755 aaKnown RBP10.85□□□□□ -0.67
CALD1-210ENST00000443197 DTLQ9NZJ0 730 aa10.85□□□□□ -0.67
CALD1-210ENST00000443197 HAO1Q9UJM8 370 aa10.85□□□□□ -0.67
CALD1-210ENST00000443197 MID2Q9UJV3 735 aa10.85□□□□□ -0.67
CALD1-210ENST00000443197 ANGPTL3Q9Y5C1 460 aa10.85□□□□□ -0.67
CALD1-210ENST00000443197 CLGNO14967 610 aa10.85□□□□□ -0.67
CALD1-210ENST00000443197 TBX18O95935 607 aa10.85□□□□□ -0.67
CALD1-210ENST00000443197 SLC10A3P09131 477 aa10.85□□□□□ -0.67
CALD1-210ENST00000443197 WEE1P30291 646 aa10.85□□□□□ -0.67
CALD1-210ENST00000443197 RECQLP46063 649 aaPredicted RBP10.85□□□□□ -0.67
CALD1-210ENST00000443197 GEMP55040 296 aa10.85□□□□□ -0.67
CALD1-210ENST00000443197 ELAVL2Q12926 359 aaKnown RBP10.85□□□□□ -0.67
CALD1-210ENST00000443197 PARP6Q2NL67 630 aa10.85□□□□□ -0.67
CALD1-210ENST00000443197 SPDYCQ5MJ68 293 aa10.85□□□□□ -0.67
CALD1-210ENST00000443197 MORN1Q5T089 497 aa10.85□□□□□ -0.67
CALD1-210ENST00000443197 NLRP9Q7RTR0 991 aa10.85□□□□□ -0.67
CALD1-210ENST00000443197 TAC4Q86UU9 113 aa10.85□□□□□ -0.67
CALD1-210ENST00000443197 STK32AQ8WU08 396 aa10.85□□□□□ -0.67
CALD1-210ENST00000443197 TEKT4Q8WW24 435 aa10.85□□□□□ -0.67
CALD1-210ENST00000443197 RSPH1Q8WYR4 309 aa10.85□□□□□ -0.67
CALD1-210ENST00000443197 CYP4F12Q9HCS2 524 aa10.85□□□□□ -0.67
CALD1-210ENST00000443197 SH3BP1Q9Y3L3 701 aa10.85□□□□□ -0.67
CALD1-210ENST00000443197 UTRNP46939 3433 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 PIRO00625 290 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 METTL18O95568 372 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 CCNB1P14635 433 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 TAC1P20366 129 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 L1CAMP32004 1257 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 PTPN9P43378 593 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 OCRLQ01968 901 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 POLD3Q15054 466 aaPredicted RBP10.84□□□□□ -0.67
CALD1-210ENST00000443197 MUM1Q2TAK8 710 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 EML3Q32P44 896 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 AGMOQ6ZNB7 445 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 MTDHQ86UE4 582 aaKnown RBP10.84□□□□□ -0.67
CALD1-210ENST00000443197 NIPA2Q8N8Q9 360 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 DDI1Q8WTU0 396 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.84□□□□□ -0.671e-7■■■■■ 35.3
CALD1-210ENST00000443197 NAT9Q9BTE0 207 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 ACSS3Q9H6R3 686 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 SF3B1O75533 1304 aaKnown RBP eCLIP10.84□□□□□ -0.67
CALD1-210ENST00000443197 A0A0U1RQF3 1178 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 CHRNA1P02708 482 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 MYL2P10916 166 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 WARSP23381 471 aaKnown RBP10.84□□□□□ -0.67
CALD1-210ENST00000443197 MMP13P45452 471 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 SERPINB4P48594 390 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 CDH17Q12864 832 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 N4BP2L1Q5TBK1 243 aaPredicted RBP10.84□□□□□ -0.67
CALD1-210ENST00000443197 OTOP3Q7RTS5 596 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 ECHDC2Q86YB7 292 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 FAM161BQ96MY7 647 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 CINPQ9BW66 212 aaPredicted RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms