RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 MID1O15344 667 aa14.97□□□□□ -0.01
HMGN1-208ENST00000443046 LATO43561 262 aa14.97□□□□□ -0.01
HMGN1-208ENST00000443046 IGLV3-27P01718 113 aa14.97□□□□□ -0.01
HMGN1-208ENST00000443046 TRIM49P0CI25 452 aa14.97□□□□□ -0.01
HMGN1-208ENST00000443046 TRIM49CP0CI26 452 aa14.97□□□□□ -0.01
HMGN1-208ENST00000443046 PDIA4P13667 645 aaKnown RBP14.97□□□□□ -0.01
HMGN1-208ENST00000443046 CKMT2P17540 419 aa14.97□□□□□ -0.01
HMGN1-208ENST00000443046 ACP1P24666 158 aa14.97□□□□□ -0.01
HMGN1-208ENST00000443046 ARRB1P49407 418 aaPredicted RBP14.97□□□□□ -0.01
HMGN1-208ENST00000443046 SFSWAPQ12872 951 aaKnown RBP14.97□□□□□ -0.01
HMGN1-208ENST00000443046 CST6Q15828 149 aa14.97□□□□□ -0.01
HMGN1-208ENST00000443046 NFIL3Q16649 462 aa14.97□□□□□ -0.01
HMGN1-208ENST00000443046 TBC1D25Q3MII6 688 aa14.97□□□□□ -0.01
HMGN1-208ENST00000443046 FAM133BQ5BKY9 247 aaKnown RBP14.97□□□□□ -0.01
HMGN1-208ENST00000443046 BSPRYQ5W0U4 402 aa14.97□□□□□ -0.01
HMGN1-208ENST00000443046 CEP135Q66GS9 1140 aa14.97□□□□□ -0.01
HMGN1-208ENST00000443046 SPACA3Q8IXA5 215 aa14.97□□□□□ -0.01
HMGN1-208ENST00000443046 SCML4Q8N228 414 aa14.97□□□□□ -0.01
HMGN1-208ENST00000443046 FIBINQ8TAL6 211 aa14.97□□□□□ -0.01
HMGN1-208ENST00000443046 SEMA4DQ92854 862 aa14.97□□□□□ -0.01
HMGN1-208ENST00000443046 CISHQ9NSE2 258 aa14.97□□□□□ -0.01
HMGN1-208ENST00000443046 TPX2Q9ULW0 747 aaKnown RBP14.97□□□□□ -0.01
HMGN1-208ENST00000443046 YJEFN3A6XGL0 299 aa14.96□□□□□ -0.01
HMGN1-208ENST00000443046 E7ENQ6 273 aa14.96□□□□□ -0.01
HMGN1-208ENST00000443046 J3QKU1 62 aa14.96□□□□□ -0.01
HMGN1-208ENST00000443046 XPO1O14980 1071 aaKnown RBP14.96□□□□□ -0.01
HMGN1-208ENST00000443046 IRAK2O43187 625 aa14.96□□□□□ -0.01
HMGN1-208ENST00000443046 RNASEH1O60930 286 aaKnown RBP14.96□□□□□ -0.01
HMGN1-208ENST00000443046 SLC6A4P31645 630 aa14.96□□□□□ -0.01
HMGN1-208ENST00000443046 ACTN2P35609 894 aa14.96□□□□□ -0.01
HMGN1-208ENST00000443046 INSM1Q01101 510 aaPredicted RBP14.96□□□□□ -0.01
HMGN1-208ENST00000443046 PROX2Q3B8N5 592 aa14.96□□□□□ -0.01
HMGN1-208ENST00000443046 KMT5BQ4FZB7 885 aa14.96□□□□□ -0.01
HMGN1-208ENST00000443046 RESP18Q5W5W9 173 aa14.96□□□□□ -0.01
HMGN1-208ENST00000443046 RFWD3Q6PCD5 774 aa14.96□□□□□ -0.01
HMGN1-208ENST00000443046 INTS8Q75QN2 995 aaKnown RBP14.96□□□□□ -0.01
HMGN1-208ENST00000443046 SPATS2Q86XZ4 545 aaKnown RBP14.96□□□□□ -0.01
HMGN1-208ENST00000443046 ZNF557Q8N988 423 aaPredicted RBP14.96□□□□□ -0.01
HMGN1-208ENST00000443046 GANCQ8TET4 914 aa14.96□□□□□ -0.01
HMGN1-208ENST00000443046 EDEM1Q92611 657 aa14.96□□□□□ -0.01
HMGN1-208ENST00000443046 AZIN2Q96A70 460 aa14.96□□□□□ -0.01
HMGN1-208ENST00000443046 FAM131CQ96AQ9 280 aa14.96□□□□□ -0.01
HMGN1-208ENST00000443046 ZNF396Q96N95 335 aaPredicted RBP14.96□□□□□ -0.01
HMGN1-208ENST00000443046 FAM129BQ96TA1 746 aa14.96□□□□□ -0.01
HMGN1-208ENST00000443046 TMEM8AQ9HCN3 771 aa14.96□□□□□ -0.01
HMGN1-208ENST00000443046 AASDHPPTQ9NRN7 309 aa14.96□□□□□ -0.01
HMGN1-208ENST00000443046 CLCA2Q9UQC9 943 aa14.96□□□□□ -0.01
HMGN1-208ENST00000443046 DOCK9Q9BZ29 2069 aa14.96□□□□□ -0.02
HMGN1-208ENST00000443046 BSNQ9UPA5 3926 aa14.96□□□□□ -0.02
HMGN1-208ENST00000443046 ITIH6Q6UXX5 1313 aa14.95□□□□□ -0.02
HMGN1-208ENST00000443046 NYNRINQ9P2P1 1898 aaKnown RBP14.95□□□□□ -0.02
HMGN1-208ENST00000443046 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.95□□□□□ -0.02
HMGN1-208ENST00000443046 GOLGA6L7A0A1B0GV03 622 aa14.95□□□□□ -0.02
HMGN1-208ENST00000443046 TARSL2A2RTX5 802 aaKnown RBP14.95□□□□□ -0.02
HMGN1-208ENST00000443046 MSI1O43347 362 aaKnown RBP14.95□□□□□ -0.02
HMGN1-208ENST00000443046 TBL1XO60907 577 aa14.95□□□□□ -0.02
HMGN1-208ENST00000443046 RNASEH2AO75792 299 aaKnown RBP14.95□□□□□ -0.02
HMGN1-208ENST00000443046 ASLP04424 464 aa14.95□□□□□ -0.02
HMGN1-208ENST00000443046 GLDCP23378 1020 aa14.95□□□□□ -0.02
HMGN1-208ENST00000443046 SLC8A1P32418 973 aa14.95□□□□□ -0.02
HMGN1-208ENST00000443046 CSKP41240 450 aa14.95□□□□□ -0.02
HMGN1-208ENST00000443046 ADPRHP54922 357 aa14.95□□□□□ -0.02
HMGN1-208ENST00000443046 SLC8A3P57103 927 aa14.95□□□□□ -0.02
HMGN1-208ENST00000443046 CXADRP78310 365 aa14.95□□□□□ -0.02
HMGN1-208ENST00000443046 CCDC173Q0VFZ6 552 aa14.95□□□□□ -0.02
HMGN1-208ENST00000443046 MSANTD2Q6P1R3 559 aa14.95□□□□□ -0.02
HMGN1-208ENST00000443046 MMAAQ8IVH4 418 aaKnown RBP14.95□□□□□ -0.02
HMGN1-208ENST00000443046 OXR1Q8N573 874 aa14.95□□□□□ -0.02
HMGN1-208ENST00000443046 AADATQ8N5Z0 425 aa14.95□□□□□ -0.02
HMGN1-208ENST00000443046 MFSD2AQ8NA29 543 aa14.95□□□□□ -0.02
HMGN1-208ENST00000443046 RNF139Q8WU17 664 aa14.95□□□□□ -0.02
HMGN1-208ENST00000443046 PAGE5Q96GU1 130 aa14.95□□□□□ -0.02
HMGN1-208ENST00000443046 HIC2Q96JB3 615 aa14.95□□□□□ -0.02
HMGN1-208ENST00000443046 SERAC1Q96JX3 654 aa14.95□□□□□ -0.02
HMGN1-208ENST00000443046 UPF2Q9HAU5 1272 aaKnown RBP14.95□□□□□ -0.02
HMGN1-208ENST00000443046 ABCC13Q9NSE7 274 aa14.95□□□□□ -0.02
HMGN1-208ENST00000443046 EXOC1Q9NV70 894 aa14.95□□□□□ -0.02
HMGN1-208ENST00000443046 ARHGAP20Q9P2F6 1191 aa14.95□□□□□ -0.02
HMGN1-208ENST00000443046 PCDHA7Q9UN72 937 aa14.95□□□□□ -0.02
HMGN1-208ENST00000443046 ACTN4O43707 911 aaKnown RBP14.94□□□□□ -0.02
HMGN1-208ENST00000443046 CALUO43852 315 aaPredicted RBP14.94□□□□□ -0.02
HMGN1-208ENST00000443046 SRPRAP08240 638 aaKnown RBP14.94□□□□□ -0.02
HMGN1-208ENST00000443046 GOT1P17174 413 aa14.94□□□□□ -0.02
HMGN1-208ENST00000443046 GTF2H1P32780 548 aa14.94□□□□□ -0.02
HMGN1-208ENST00000443046 ST8SIA6P61647 398 aa14.94□□□□□ -0.02
HMGN1-208ENST00000443046 KCNH2Q12809 1159 aa14.94□□□□□ -0.02
HMGN1-208ENST00000443046 PKDCCQ504Y2 493 aa14.94□□□□□ -0.02
HMGN1-208ENST00000443046 KRT39Q6A163 491 aa14.94□□□□□ -0.02
HMGN1-208ENST00000443046 NADSYN1Q6IA69 706 aa14.94□□□□□ -0.02
HMGN1-208ENST00000443046 SND1Q7KZF4 910 aaKnown RBP eCLIP14.94□□□□□ -0.02
HMGN1-208ENST00000443046 IQCHQ86VS3 1027 aa14.94□□□□□ -0.02
HMGN1-208ENST00000443046 MFN1Q8IWA4 741 aa14.94□□□□□ -0.02
HMGN1-208ENST00000443046 DHX40Q8IX18 779 aaKnown RBP14.94□□□□□ -0.02
HMGN1-208ENST00000443046 CCDC150Q8NCX0 1101 aa14.94□□□□□ -0.02
HMGN1-208ENST00000443046 KCTD13Q8WZ19 329 aa14.94□□□□□ -0.02
HMGN1-208ENST00000443046 TATDN2Q93075 761 aa14.94□□□□□ -0.02
HMGN1-208ENST00000443046 MYEOVQ96EZ4 313 aa14.94□□□□□ -0.02
HMGN1-208ENST00000443046 PRICKLE1Q96MT3 831 aaPredicted RBP14.94□□□□□ -0.02
HMGN1-208ENST00000443046 OMDQ99983 421 aa14.94□□□□□ -0.02
HMGN1-208ENST00000443046 FAM13BQ9NYF5 915 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms