RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 ZNF234Q14588 700 aa9.09□□□□□ -0.95
USP6NL-203ENST00000443016 SYCP1Q15431 976 aa9.09□□□□□ -0.95
USP6NL-203ENST00000443016 FUT11Q495W5 492 aa9.09□□□□□ -0.95
USP6NL-203ENST00000443016 FAM217AQ8IXS0 508 aa9.09□□□□□ -0.95
USP6NL-203ENST00000443016 RGL4Q8IZJ4 473 aa9.09□□□□□ -0.95
USP6NL-203ENST00000443016 NEK11Q8NG66 645 aa9.09□□□□□ -0.95
USP6NL-203ENST00000443016 DQX1Q8TE96 717 aaKnown RBP9.09□□□□□ -0.95
USP6NL-203ENST00000443016 NOX5Q96PH1 765 aa9.09□□□□□ -0.95
USP6NL-203ENST00000443016 DDX50Q9BQ39 737 aaKnown RBP9.09□□□□□ -0.95
USP6NL-203ENST00000443016 PDCL3Q9H2J4 239 aa9.09□□□□□ -0.95
USP6NL-203ENST00000443016 SYNCQ9H7C4 482 aa9.09□□□□□ -0.95
USP6NL-203ENST00000443016 STIM2Q9P246 746 aa9.09□□□□□ -0.95
USP6NL-203ENST00000443016 ATXN2Q99700 1313 aaKnown RBP9.09□□□□□ -0.95
USP6NL-203ENST00000443016 IRAK2O43187 625 aa9.08□□□□□ -0.96
USP6NL-203ENST00000443016 TEX33O43247 280 aa9.08□□□□□ -0.96
USP6NL-203ENST00000443016 ACSL4O60488 711 aa9.08□□□□□ -0.96
USP6NL-203ENST00000443016 TBL1XO60907 577 aa9.08□□□□□ -0.96
USP6NL-203ENST00000443016 PTMAP06454 111 aaKnown RBP9.08□□□□□ -0.96
USP6NL-203ENST00000443016 PON1P27169 355 aa9.08□□□□□ -0.96
USP6NL-203ENST00000443016 HLA-FP30511 346 aa9.08□□□□□ -0.96
USP6NL-203ENST00000443016 YWHAZP63104 245 aaKnown RBP9.08□□□□□ -0.96
USP6NL-203ENST00000443016 IRX4P78413 519 aa9.08□□□□□ -0.96
USP6NL-203ENST00000443016 LMAN2Q12907 356 aa9.08□□□□□ -0.96
USP6NL-203ENST00000443016 MEA1Q16626 185 aa9.08□□□□□ -0.96
USP6NL-203ENST00000443016 FNDC3BQ53EP0 1204 aaKnown RBP9.08□□□□□ -0.96
USP6NL-203ENST00000443016 TMPRSS6Q8IU80 811 aa9.08□□□□□ -0.96
USP6NL-203ENST00000443016 PASD1Q8IV76 773 aa9.08□□□□□ -0.96
USP6NL-203ENST00000443016 MFN1Q8IWA4 741 aa9.08□□□□□ -0.96
USP6NL-203ENST00000443016 AHI1Q8N157 1196 aa9.08□□□□□ -0.96
USP6NL-203ENST00000443016 ZNF557Q8N988 423 aaPredicted RBP9.08□□□□□ -0.96
USP6NL-203ENST00000443016 PRCCQ92733 491 aaPredicted RBP9.08□□□□□ -0.96
USP6NL-203ENST00000443016 SIPA1Q96FS4 1042 aa9.08□□□□□ -0.96
USP6NL-203ENST00000443016 MKRN2Q9H000 416 aaKnown RBP9.08□□□□□ -0.96
USP6NL-203ENST00000443016 POPDC2Q9HBU9 364 aa9.08□□□□□ -0.96
USP6NL-203ENST00000443016 TMEM9BQ9NQ34 198 aa9.08□□□□□ -0.96
USP6NL-203ENST00000443016 TMEM74BQ9NUR3 256 aa9.08□□□□□ -0.96
USP6NL-203ENST00000443016 IMPACTQ9P2X3 320 aa9.08□□□□□ -0.96
USP6NL-203ENST00000443016 STOML2Q9UJZ1 356 aa9.08□□□□□ -0.96
USP6NL-203ENST00000443016 TLR6Q9Y2C9 796 aa9.08□□□□□ -0.96
USP6NL-203ENST00000443016 CEP83Q9Y592 693 aa9.08□□□□□ -0.96
USP6NL-203ENST00000443016 IGHV1OR15-9A0A0B4J2B8 117 aa9.08□□□□□ -0.96
USP6NL-203ENST00000443016 GOLGA6L7A0A1B0GV03 622 aa9.08□□□□□ -0.96
USP6NL-203ENST00000443016 PAPSS1O43252 624 aaPredicted RBP9.08□□□□□ -0.96
USP6NL-203ENST00000443016 APOEP02649 317 aa9.08□□□□□ -0.96
USP6NL-203ENST00000443016 ATP5BP06576 529 aaKnown RBP9.08□□□□□ -0.96
USP6NL-203ENST00000443016 MAPK8P45983 427 aa9.08□□□□□ -0.96
USP6NL-203ENST00000443016 PDCLQ13371 301 aa9.08□□□□□ -0.96
USP6NL-203ENST00000443016 BIRC2Q13490 618 aa9.08□□□□□ -0.96
USP6NL-203ENST00000443016 CDH18Q13634 790 aa9.08□□□□□ -0.96
USP6NL-203ENST00000443016 RAPGEF1Q13905 1077 aa9.08□□□□□ -0.96
USP6NL-203ENST00000443016 UAP1L1Q3KQV9 507 aa9.08□□□□□ -0.96
USP6NL-203ENST00000443016 DCAF6Q58WW2 860 aa9.08□□□□□ -0.96
USP6NL-203ENST00000443016 MPP7Q5T2T1 576 aa9.08□□□□□ -0.96
USP6NL-203ENST00000443016 SYCP2LQ5T4T6 812 aa9.08□□□□□ -0.96
USP6NL-203ENST00000443016 PIK3R6Q5UE93 754 aa9.08□□□□□ -0.96
USP6NL-203ENST00000443016 CHST9Q7L1S5 443 aa9.08□□□□□ -0.96
USP6NL-203ENST00000443016 TMEM110Q86TL2 294 aa9.08□□□□□ -0.96
USP6NL-203ENST00000443016 WFIKKN2Q8TEU8 576 aa9.08□□□□□ -0.96
USP6NL-203ENST00000443016 SHC3Q92529 594 aa9.08□□□□□ -0.96
USP6NL-203ENST00000443016 RNF34Q969K3 372 aa9.08□□□□□ -0.96
USP6NL-203ENST00000443016 HSPA12BQ96MM6 686 aa9.08□□□□□ -0.96
USP6NL-203ENST00000443016 LSM14BQ9BX40 385 aaKnown RBP9.08□□□□□ -0.96
USP6NL-203ENST00000443016 SLC4A5Q9BY07 1137 aa9.08□□□□□ -0.96
USP6NL-203ENST00000443016 TJP2Q9UDY2 1190 aa9.08□□□□□ -0.96
USP6NL-203ENST00000443016 GGA2Q9UJY4 613 aa9.08□□□□□ -0.96
USP6NL-203ENST00000443016 DNAJC12Q9UKB3 198 aa9.08□□□□□ -0.96
USP6NL-203ENST00000443016 NOVA2Q9UNW9 492 aaKnown RBP9.08□□□□□ -0.96
USP6NL-203ENST00000443016 ASPMQ8IZT6 3477 aa9.07□□□□□ -0.96
USP6NL-203ENST00000443016 NUP205Q92621 2012 aa9.07□□□□□ -0.96
USP6NL-203ENST00000443016 SYNJ2BP-COX16A0A087WUM0 186 aa9.07□□□□□ -0.96
USP6NL-203ENST00000443016 NRDCO43847 1150 aa9.07□□□□□ -0.96
USP6NL-203ENST00000443016 IGLV3-27P01718 113 aa9.07□□□□□ -0.96
USP6NL-203ENST00000443016 FYNP06241 537 aa9.07□□□□□ -0.96
USP6NL-203ENST00000443016 PABPC1P11940 636 aaKnown RBP9.07□□□□□ -0.96
USP6NL-203ENST00000443016 HLA-EP13747 358 aa9.07□□□□□ -0.96
USP6NL-203ENST00000443016 POLR2EP19388 210 aaKnown RBP9.07□□□□□ -0.96
USP6NL-203ENST00000443016 GSDMDP57764 484 aa9.07□□□□□ -0.96
USP6NL-203ENST00000443016 SNX16P57768 344 aa9.07□□□□□ -0.96
USP6NL-203ENST00000443016 ZNF211Q13398 564 aaPredicted RBP9.07□□□□□ -0.96
USP6NL-203ENST00000443016 SYPL2Q5VXT5 272 aa9.07□□□□□ -0.96
USP6NL-203ENST00000443016 TMEM215Q68D42 235 aa9.07□□□□□ -0.96
USP6NL-203ENST00000443016 TAC4Q86UU9 113 aa9.07□□□□□ -0.96
USP6NL-203ENST00000443016 HJURPQ8NCD3 748 aaPredicted RBP9.07□□□□□ -0.96
USP6NL-203ENST00000443016 ZNF397Q8NF99 534 aaPredicted RBP9.07□□□□□ -0.96
USP6NL-203ENST00000443016 CYB5D2Q8WUJ1 264 aa9.07□□□□□ -0.96
USP6NL-203ENST00000443016 PPP1R13BQ96KQ4 1090 aa9.07□□□□□ -0.96
USP6NL-203ENST00000443016 PLCB1Q9NQ66 1216 aa9.07□□□□□ -0.96
USP6NL-203ENST00000443016 DDX56Q9NY93 547 aaKnown RBP9.07□□□□□ -0.96
USP6NL-203ENST00000443016 COX16Q9P0S2 106 aa9.07□□□□□ -0.96
USP6NL-203ENST00000443016 SLC12A6Q9UHW9 1150 aa9.07□□□□□ -0.96
USP6NL-203ENST00000443016 CYTH4Q9UIA0 394 aa9.07□□□□□ -0.96
USP6NL-203ENST00000443016 SPEGQ15772 3267 aa9.07□□□□□ -0.96
USP6NL-203ENST00000443016 KNL1Q8NG31 2342 aa9.07□□□□□ -0.96
USP6NL-203ENST00000443016 TRUB2O95900 331 aaKnown RBP9.07□□□□□ -0.96
USP6NL-203ENST00000443016 PRKCHP24723 683 aa9.07□□□□□ -0.96
USP6NL-203ENST00000443016 CD6P30203 668 aa9.07□□□□□ -0.96
USP6NL-203ENST00000443016 SLC6A4P31645 630 aa9.07□□□□□ -0.96
USP6NL-203ENST00000443016 HOXD12P35452 270 aa9.07□□□□□ -0.96
USP6NL-203ENST00000443016 PBX1P40424 430 aa9.07□□□□□ -0.96
USP6NL-203ENST00000443016 RPL34P49207 117 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms