RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 CDCP2Q5VXM1 449 aa10.4□□□□□ -0.74
SYN3-204ENST00000441821 PM20D1Q6GTS8 502 aa10.4□□□□□ -0.74
SYN3-204ENST00000441821 UNC13DQ70J99 1090 aa10.4□□□□□ -0.74
SYN3-204ENST00000441821 SV2AQ7L0J3 742 aa10.4□□□□□ -0.74
SYN3-204ENST00000441821 SPATS2Q86XZ4 545 aaKnown RBP10.4□□□□□ -0.74
SYN3-204ENST00000441821 LURAP1LQ8IV03 231 aa10.4□□□□□ -0.74
SYN3-204ENST00000441821 ZNF557Q8N988 423 aaPredicted RBP10.4□□□□□ -0.74
SYN3-204ENST00000441821 KDM1BQ8NB78 822 aa10.4□□□□□ -0.74
SYN3-204ENST00000441821 KCNE4Q8WWG9 221 aa10.4□□□□□ -0.74
SYN3-204ENST00000441821 TTC17Q96AE7 1141 aa10.4□□□□□ -0.74
SYN3-204ENST00000441821 IRX2Q9BZI1 471 aaPredicted RBP10.4□□□□□ -0.74
SYN3-204ENST00000441821 OLA1Q9NTK5 396 aaKnown RBP10.4□□□□□ -0.74
SYN3-204ENST00000441821 TARSL2A2RTX5 802 aaKnown RBP10.39□□□□□ -0.75
SYN3-204ENST00000441821 TRIM38O00635 465 aa10.39□□□□□ -0.75
SYN3-204ENST00000441821 KLK10O43240 276 aa10.39□□□□□ -0.75
SYN3-204ENST00000441821 LATO43561 262 aa10.39□□□□□ -0.75
SYN3-204ENST00000441821 SIGLEC6O43699 453 aa10.39□□□□□ -0.75
SYN3-204ENST00000441821 MAGEC1O60732 1142 aa10.39□□□□□ -0.75
SYN3-204ENST00000441821 HLA-DRAP01903 254 aa10.39□□□□□ -0.75
SYN3-204ENST00000441821 MPOP05164 745 aa10.39□□□□□ -0.75
SYN3-204ENST00000441821 GOT1P17174 413 aa10.39□□□□□ -0.75
SYN3-204ENST00000441821 SLC8A1P32418 973 aa10.39□□□□□ -0.75
SYN3-204ENST00000441821 SGSHP51688 502 aa10.39□□□□□ -0.75
SYN3-204ENST00000441821 ADPRHP54922 357 aa10.39□□□□□ -0.75
SYN3-204ENST00000441821 GABREP78334 506 aa10.39□□□□□ -0.75
SYN3-204ENST00000441821 SRSF1Q07955 248 aaKnown RBP eCLIP10.39□□□□□ -0.75
SYN3-204ENST00000441821 OVGP1Q12889 678 aa10.39□□□□□ -0.75
SYN3-204ENST00000441821 NAPEPLDQ6IQ20 393 aa10.39□□□□□ -0.75
SYN3-204ENST00000441821 FAM173BQ6P4H8 233 aa10.39□□□□□ -0.75
SYN3-204ENST00000441821 SND1Q7KZF4 910 aaKnown RBP eCLIP10.39□□□□□ -0.75
SYN3-204ENST00000441821 BHLHA9Q7RTU4 235 aa10.39□□□□□ -0.75
SYN3-204ENST00000441821 IQCHQ86VS3 1027 aa10.39□□□□□ -0.75
SYN3-204ENST00000441821 SLC9A9Q8IVB4 645 aa10.39□□□□□ -0.75
SYN3-204ENST00000441821 MMAAQ8IVH4 418 aaKnown RBP10.39□□□□□ -0.75
SYN3-204ENST00000441821 OR14C36Q8NHC7 312 aa10.39□□□□□ -0.75
SYN3-204ENST00000441821 WFDC5Q8TCV5 224 aa10.39□□□□□ -0.75
SYN3-204ENST00000441821 TMC2Q8TDI7 906 aa10.39□□□□□ -0.75
SYN3-204ENST00000441821 LMLNQ96KR4 655 aa10.39□□□□□ -0.75
SYN3-204ENST00000441821 POLR1BQ9H9Y6 1135 aa10.39□□□□□ -0.75
SYN3-204ENST00000441821 APOBEC3GQ9HC16 384 aaKnown RBP10.39□□□□□ -0.75
SYN3-204ENST00000441821 SLC39A2Q9NP94 309 aa10.39□□□□□ -0.75
SYN3-204ENST00000441821 K7ENP7 123 aa10.38□□□□□ -0.75
SYN3-204ENST00000441821 IRAK2O43187 625 aa10.38□□□□□ -0.75
SYN3-204ENST00000441821 TBL1XO60907 577 aa10.38□□□□□ -0.75
SYN3-204ENST00000441821 USP12O75317 370 aa10.38□□□□□ -0.75
SYN3-204ENST00000441821 ZBED1O96006 694 aa10.38□□□□□ -0.75
SYN3-204ENST00000441821 ASLP04424 464 aa10.38□□□□□ -0.75
SYN3-204ENST00000441821 CD58P19256 250 aa10.38□□□□□ -0.75
SYN3-204ENST00000441821 PDCP20941 246 aa10.38□□□□□ -0.75
SYN3-204ENST00000441821 C5AR1P21730 350 aa10.38□□□□□ -0.75
SYN3-204ENST00000441821 NUDT1P36639 197 aa10.38□□□□□ -0.75
SYN3-204ENST00000441821 CSKP41240 450 aa10.38□□□□□ -0.75
SYN3-204ENST00000441821 PIK3CAP42336 1068 aa10.38□□□□□ -0.75
SYN3-204ENST00000441821 TKTL1P51854 596 aa10.38□□□□□ -0.75
SYN3-204ENST00000441821 SLC8A3P57103 927 aa10.38□□□□□ -0.75
SYN3-204ENST00000441821 PIK3R6Q5UE93 754 aa10.38□□□□□ -0.75
SYN3-204ENST00000441821 INO80CQ6PI98 192 aaPredicted RBP10.38□□□□□ -0.75
SYN3-204ENST00000441821 PRPF39Q86UA1 669 aaKnown RBP10.38□□□□□ -0.75
SYN3-204ENST00000441821 PIGZQ86VD9 579 aa10.38□□□□□ -0.75
SYN3-204ENST00000441821 SLC25A45Q8N413 288 aa10.38□□□□□ -0.75
SYN3-204ENST00000441821 AADATQ8N5Z0 425 aa10.38□□□□□ -0.75
SYN3-204ENST00000441821 IQUBQ8NA54 791 aa10.38□□□□□ -0.75
SYN3-204ENST00000441821 FIBINQ8TAL6 211 aa10.38□□□□□ -0.75
SYN3-204ENST00000441821 DHX58Q96C10 678 aa10.38□□□□□ -0.75
SYN3-204ENST00000441821 INTS4Q96HW7 963 aaKnown RBP10.38□□□□□ -0.75
SYN3-204ENST00000441821 MRGPRX3Q96LB0 322 aa10.38□□□□□ -0.75
SYN3-204ENST00000441821 HEXIM2Q96MH2 286 aaKnown RBP10.38□□□□□ -0.75
SYN3-204ENST00000441821 DEPDC7Q96QD5 511 aa10.38□□□□□ -0.75
SYN3-204ENST00000441821 FAM129BQ96TA1 746 aa10.38□□□□□ -0.75
SYN3-204ENST00000441821 IMPG2Q9BZV3 1241 aa10.38□□□□□ -0.75
SYN3-204ENST00000441821 ASCL3Q9NQ33 180 aa10.38□□□□□ -0.75
SYN3-204ENST00000441821 THSD1Q9NS62 852 aa10.38□□□□□ -0.75
SYN3-204ENST00000441821 ARHGAP20Q9P2F6 1191 aa10.38□□□□□ -0.75
SYN3-204ENST00000441821 SFMBT1Q9UHJ3 866 aa10.38□□□□□ -0.75
SYN3-204ENST00000441821 TBC1D3DA0A087WVF3 549 aa10.37□□□□□ -0.75
SYN3-204ENST00000441821 TBC1D3IA0A087WXS9 549 aa10.37□□□□□ -0.75
SYN3-204ENST00000441821 TBC1D3EA0A087X179 549 aa10.37□□□□□ -0.75
SYN3-204ENST00000441821 TBC1D3KA0A087X1G2 549 aa10.37□□□□□ -0.75
SYN3-204ENST00000441821 EDDM13A0A1B0GTR0 161 aa10.37□□□□□ -0.75
SYN3-204ENST00000441821 PVALEFA0A1B0GWK0 134 aa10.37□□□□□ -0.75
SYN3-204ENST00000441821 TBC1D3FA6NER0 549 aaPredicted RBP10.37□□□□□ -0.75
SYN3-204ENST00000441821 TBC1D3LB9A6J9 549 aa10.37□□□□□ -0.75
SYN3-204ENST00000441821 OPA1O60313 960 aa10.37□□□□□ -0.75
SYN3-204ENST00000441821 SDC3O75056 442 aa10.37□□□□□ -0.75
SYN3-204ENST00000441821 ADH1BP00325 375 aa10.37□□□□□ -0.75
SYN3-204ENST00000441821 SRPRAP08240 638 aaKnown RBP10.37□□□□□ -0.75
SYN3-204ENST00000441821 TBC1D3HP0C7X1 549 aa10.37□□□□□ -0.75
SYN3-204ENST00000441821 CKMT1AP12532 417 aa10.37□□□□□ -0.75
SYN3-204ENST00000441821 PPP2CBP62714 309 aa10.37□□□□□ -0.75
SYN3-204ENST00000441821 PPP2CAP67775 309 aa10.37□□□□□ -0.75
SYN3-204ENST00000441821 DAB2P98082 770 aa10.37□□□□□ -0.75
SYN3-204ENST00000441821 ZNF394Q53GI3 561 aa10.37□□□□□ -0.75
SYN3-204ENST00000441821 HS1BP3Q53T59 392 aa10.37□□□□□ -0.75
SYN3-204ENST00000441821 C1orf220Q5T0J3 134 aa10.37□□□□□ -0.75
SYN3-204ENST00000441821 TBC1D3GQ6DHY5 549 aa10.37□□□□□ -0.75
SYN3-204ENST00000441821 TBC1D3CQ6IPX1 549 aa10.37□□□□□ -0.75
SYN3-204ENST00000441821 IGF2-ASQ6U949 168 aa10.37□□□□□ -0.75
SYN3-204ENST00000441821 TBC1D3Q8IZP1 549 aaPredicted RBP10.37□□□□□ -0.75
SYN3-204ENST00000441821 ANKRD52Q8NB46 1076 aa10.37□□□□□ -0.75
SYN3-204ENST00000441821 OR4C6Q8NH72 309 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms