RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 MGAT5BQ3V5L5 792 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 ZBTB49Q6ZSB9 765 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 BTLAQ7Z6A9 289 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 NT5DC4Q86YG4 428 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 ZC3H7AQ8IWR0 971 aaKnown RBP7.72□□□□□ -1.17
HDAC9-214ENST00000441542 PLPP6Q8IY26 295 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 KYQ8NBH2 561 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 SLC4A11Q8NBS3 891 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 BPIFB6Q8NFQ5 453 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 BORCS5Q969J3 196 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 TRIM11Q96F44 468 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 HNRNPABQ99729 332 aaKnown RBP7.72□□□□□ -1.17
HDAC9-214ENST00000441542 DHRS4Q9BTZ2 278 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 CEP44Q9C0F1 390 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 WDR41Q9HAD4 459 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 AVENQ9NQS1 362 aaPredicted RBP7.72□□□□□ -1.17
HDAC9-214ENST00000441542 TBCCD1Q9NVR7 557 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 TXNDC16Q9P2K2 825 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 SEL1LQ9UBV2 794 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 ITGA11Q9UKX5 1188 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 DAGLAQ9Y4D2 1042 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 TTLL3Q9Y4R7 772 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 CROCCQ5TZA2 2017 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 GLI3P10071 1580 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 BTBD19C9JJ37 291 aa7.71□□□□□ -1.17
HDAC9-214ENST00000441542 KCNQ2O43526 872 aa7.71□□□□□ -1.17
HDAC9-214ENST00000441542 MAN1A2O60476 641 aa7.71□□□□□ -1.17
HDAC9-214ENST00000441542 CNOT3O75175 753 aaKnown RBP7.71□□□□□ -1.17
HDAC9-214ENST00000441542 APOEP02649 317 aa7.71□□□□□ -1.17
HDAC9-214ENST00000441542 CHRNGP07510 517 aa7.71□□□□□ -1.17
HDAC9-214ENST00000441542 NCAM1P13591 858 aa7.71□□□□□ -1.17
HDAC9-214ENST00000441542 MPSTP25325 297 aa7.71□□□□□ -1.17
HDAC9-214ENST00000441542 TYK2P29597 1187 aa7.71□□□□□ -1.17
HDAC9-214ENST00000441542 EEF1DP29692 281 aaKnown RBP7.71□□□□□ -1.17
HDAC9-214ENST00000441542 TCF7P36402 384 aaPredicted RBP7.71□□□□□ -1.17
HDAC9-214ENST00000441542 SREBF1P36956 1147 aa7.71□□□□□ -1.17
HDAC9-214ENST00000441542 CDH6P55285 790 aa7.71□□□□□ -1.17
HDAC9-214ENST00000441542 TPTEP56180 551 aa7.71□□□□□ -1.17
HDAC9-214ENST00000441542 AP3B2Q13367 1082 aa7.71□□□□□ -1.17
HDAC9-214ENST00000441542 TUBB3Q13509 450 aa7.71□□□□□ -1.17
HDAC9-214ENST00000441542 TBCCQ15814 346 aa7.71□□□□□ -1.17
HDAC9-214ENST00000441542 ZNF423Q2M1K9 1284 aa7.71□□□□□ -1.17
HDAC9-214ENST00000441542 LRRC8EQ6NSJ5 796 aa7.71□□□□□ -1.17
HDAC9-214ENST00000441542 KIAA2013Q8IYS2 634 aa7.71□□□□□ -1.17
HDAC9-214ENST00000441542 DCLK2Q8N568 766 aa7.71□□□□□ -1.17
HDAC9-214ENST00000441542 LZTR1Q8N653 840 aa7.71□□□□□ -1.17
HDAC9-214ENST00000441542 ATP6V0A1Q93050 837 aa7.71□□□□□ -1.17
HDAC9-214ENST00000441542 VMP1Q96GC9 406 aa7.71□□□□□ -1.17
HDAC9-214ENST00000441542 RPL10LQ96L21 214 aaKnown RBP7.71□□□□□ -1.17
HDAC9-214ENST00000441542 APBA2Q99767 749 aa7.71□□□□□ -1.17
HDAC9-214ENST00000441542 TEKT3Q9BXF9 490 aa7.71□□□□□ -1.17
HDAC9-214ENST00000441542 NOL6Q9H6R4 1146 aaKnown RBP7.71□□□□□ -1.17
HDAC9-214ENST00000441542 CD209Q9NNX6 404 aa7.71□□□□□ -1.17
HDAC9-214ENST00000441542 PALMDQ9NP74 551 aa7.71□□□□□ -1.17
HDAC9-214ENST00000441542 TMEM216Q9P0N5 145 aa7.71□□□□□ -1.17
HDAC9-214ENST00000441542 RIMS3Q9UJD0 308 aa7.71□□□□□ -1.17
HDAC9-214ENST00000441542 PLCH1Q4KWH8 1693 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 G3V3G9 751 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 AP3B1O00203 1094 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 ITGAVP06756 1048 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 TMEM191BP0C7N4 346 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 MYCLP12524 364 aaPredicted RBP7.71□□□□□ -1.18
HDAC9-214ENST00000441542 RPL17P18621 184 aaKnown RBP7.71□□□□□ -1.18
HDAC9-214ENST00000441542 CYP3A7P24462 503 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 SHMT1P34896 483 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 EPHX2P34913 555 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 LSM3P62310 102 aaKnown RBP7.71□□□□□ -1.18
HDAC9-214ENST00000441542 DOK7Q18PE1 504 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 ZNF618Q5T7W0 954 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 DCAF8Q5TAQ9 597 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 UNC5AQ6ZN44 842 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 ABRAQ8N0Z2 381 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 FIBCD1Q8N539 461 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 SLC35B2Q8TB61 432 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 FAM117AQ9C073 453 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 C1orf21Q9H246 121 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 TPK1Q9H3S4 243 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 EHD1Q9H4M9 534 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 TUFT1Q9NNX1 390 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 TCF7L2Q9NQB0 619 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 TMED5Q9Y3A6 229 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 TNS2Q63HR2 1409 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 UBE4BO95155 1302 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 C9JVG2 144 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 GOLGA8TH3BQL2 631 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 HLA-DOAP06340 250 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 FGF3P11487 239 aaPredicted RBP7.71□□□□□ -1.18
HDAC9-214ENST00000441542 ME2P23368 584 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 RBL1P28749 1068 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 TKTP29401 623 aaKnown RBP7.71□□□□□ -1.18
HDAC9-214ENST00000441542 ALDH4A1P30038 563 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 ADAM17P78536 824 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 TCEAL1Q15170 157 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 SKIV2LQ15477 1246 aaKnown RBP7.71□□□□□ -1.18
HDAC9-214ENST00000441542 DLG2Q15700 870 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 SMUG1Q53HV7 270 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 FSCBQ5H9T9 825 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 SH3PXD2AQ5TCZ1 1133 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 GPAT2Q6NUI2 795 aa7.71□□□□□ -1.18
HDAC9-214ENST00000441542 TPTE2Q6XPS3 522 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms