RNA–Protein interactions for RNA: ENST00000440759.5

TRO-213, Transcript of trophinin, human

TSL 4

Gene TRO, Length 672 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRO-213	ENST00000440759	CLCN1	P35523	988 aa		11.73	□□□□□ -0.53
TRO-213	ENST00000440759	USP8	P40818	1118 aa		11.73	□□□□□ -0.53
TRO-213	ENST00000440759	MTIF2	P46199	727 aa	Known RBP	11.73	□□□□□ -0.53
TRO-213	ENST00000440759	IRAK1	P51617	712 aa		11.73	□□□□□ -0.53
TRO-213	ENST00000440759	YWHAZ	P63104	245 aa	Known RBP	11.73	□□□□□ -0.53
TRO-213	ENST00000440759	ARID5A	Q03989	594 aa		11.73	□□□□□ -0.53
TRO-213	ENST00000440759	FOXC1	Q12948	553 aa		11.73	□□□□□ -0.53
TRO-213	ENST00000440759	MAN2A1	Q16706	1144 aa		11.73	□□□□□ -0.53
TRO-213	ENST00000440759	PLEKHG6	Q3KR16	790 aa		11.73	□□□□□ -0.53
TRO-213	ENST00000440759	PTPN20	Q4JDL3	420 aa		11.73	□□□□□ -0.53
TRO-213	ENST00000440759	HSP90AA4P	Q58FG1	418 aa		11.73	□□□□□ -0.53
TRO-213	ENST00000440759	PITRM1	Q5JRX3	1037 aa		11.73	□□□□□ -0.53
TRO-213	ENST00000440759	WDR45B	Q5MNZ6	344 aa		11.73	□□□□□ -0.53
TRO-213	ENST00000440759	ANKRD11	Q6UB99	2663 aa	Predicted RBP	11.73	□□□□□ -0.53
TRO-213	ENST00000440759	OLFML1	Q6UWY5	402 aa		11.73	□□□□□ -0.53
TRO-213	ENST00000440759	FAM183BP	Q6ZVS7	135 aa		11.73	□□□□□ -0.53
TRO-213	ENST00000440759	SLC47A2	Q86VL8	602 aa		11.73	□□□□□ -0.53
TRO-213	ENST00000440759	CIR1	Q86X95	450 aa	Predicted RBP	11.73	□□□□□ -0.53
TRO-213	ENST00000440759	CREBRF	Q8IUR6	639 aa		11.73	□□□□□ -0.53
TRO-213	ENST00000440759	RGL4	Q8IZJ4	473 aa		11.73	□□□□□ -0.53
TRO-213	ENST00000440759	CARNMT1	Q8N4J0	409 aa		11.73	□□□□□ -0.53
TRO-213	ENST00000440759	CADM4	Q8NFZ8	388 aa		11.73	□□□□□ -0.53
TRO-213	ENST00000440759	ORAI3	Q9BRQ5	295 aa		11.73	□□□□□ -0.53
TRO-213	ENST00000440759	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	11.73	□□□□□ -0.53
TRO-213	ENST00000440759	DOCK9	Q9BZ29	2069 aa		11.73	□□□□□ -0.53
TRO-213	ENST00000440759	THAP9	Q9H5L6	903 aa		11.73	□□□□□ -0.53
TRO-213	ENST00000440759	SERGEF	Q9UGK8	458 aa		11.73	□□□□□ -0.53
TRO-213	ENST00000440759	LAMA5	O15230	3695 aa		11.72	□□□□□ -0.53
TRO-213	ENST00000440759	KCNU1	A8MYU2	1149 aa		11.72	□□□□□ -0.53
TRO-213	ENST00000440759	FOXN3	O00409	490 aa	Predicted RBP	11.72	□□□□□ -0.53
TRO-213	ENST00000440759	CAPN9	O14815	690 aa		11.72	□□□□□ -0.53
TRO-213	ENST00000440759	SIN3B	O75182	1162 aa		11.72	□□□□□ -0.53
TRO-213	ENST00000440759	GRAP2	O75791	330 aa		11.72	□□□□□ -0.53
TRO-213	ENST00000440759	APOE	P02649	317 aa		11.72	□□□□□ -0.53
TRO-213	ENST00000440759	POLR2E	P19388	210 aa	Known RBP	11.72	□□□□□ -0.53
TRO-213	ENST00000440759	OXTR	P30559	389 aa		11.72	□□□□□ -0.53
TRO-213	ENST00000440759	NUMB	P49757	651 aa		11.72	□□□□□ -0.53
TRO-213	ENST00000440759	KCNMA1	Q12791	1236 aa		11.72	□□□□□ -0.53
TRO-213	ENST00000440759	SYCP2L	Q5T4T6	812 aa		11.72	□□□□□ -0.53
TRO-213	ENST00000440759	CHSY1	Q86X52	802 aa		11.72	□□□□□ -0.53
TRO-213	ENST00000440759	APCDD1	Q8J025	514 aa		11.72	□□□□□ -0.53
TRO-213	ENST00000440759	LGI2	Q8N0V4	545 aa		11.72	□□□□□ -0.53
TRO-213	ENST00000440759	DEFB106A	Q8N104	65 aa		11.72	□□□□□ -0.53
TRO-213	ENST00000440759	PPP1R13B	Q96KQ4	1090 aa		11.72	□□□□□ -0.53
TRO-213	ENST00000440759	BTN2A3P	Q96KV6	586 aa		11.72	□□□□□ -0.53
TRO-213	ENST00000440759	FAM81B	Q96LP2	452 aa		11.72	□□□□□ -0.53
TRO-213	ENST00000440759	CAMK1G	Q96NX5	476 aa		11.72	□□□□□ -0.53
TRO-213	ENST00000440759	TRIM62	Q9BVG3	475 aa		11.72	□□□□□ -0.53
TRO-213	ENST00000440759	RSPH9	Q9H1X1	276 aa	Predicted RBP	11.72	□□□□□ -0.53
TRO-213	ENST00000440759	FAM204A	Q9H8W3	233 aa		11.72	□□□□□ -0.53
TRO-213	ENST00000440759	IL21R	Q9HBE5	538 aa		11.72	□□□□□ -0.53
TRO-213	ENST00000440759	PLCB1	Q9NQ66	1216 aa		11.72	□□□□□ -0.53
TRO-213	ENST00000440759	SUSD2	Q9UGT4	822 aa		11.72	□□□□□ -0.53
TRO-213	ENST00000440759	EIF2B4	Q9UI10	523 aa	Known RBP	11.72	□□□□□ -0.53
TRO-213	ENST00000440759	DNAJC12	Q9UKB3	198 aa		11.72	□□□□□ -0.53
TRO-213	ENST00000440759	PLA2G4C	Q9UP65	541 aa		11.72	□□□□□ -0.53
TRO-213	ENST00000440759	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	11.72	□□□□□ -0.53
TRO-213	ENST00000440759	FHOD1	Q9Y613	1164 aa		11.72	□□□□□ -0.53
TRO-213	ENST00000440759	PTPRB	P23467	1997 aa		11.72	□□□□□ -0.53
TRO-213	ENST00000440759	CELSR3	Q9NYQ7	3312 aa		11.71	□□□□□ -0.53
TRO-213	ENST00000440759	ITIH6	Q6UXX5	1313 aa		11.71	□□□□□ -0.53
TRO-213	ENST00000440759		A0A1B0GTW7	788 aa		11.71	□□□□□ -0.53
TRO-213	ENST00000440759	FAM170A	A1A519	330 aa		11.71	□□□□□ -0.53
TRO-213	ENST00000440759	TTC34	A8MYJ7	566 aa		11.71	□□□□□ -0.53
TRO-213	ENST00000440759	C10orf142	B7Z368	130 aa		11.71	□□□□□ -0.53
TRO-213	ENST00000440759		I6L893	689 aa	Predicted RBP	11.71	□□□□□ -0.53
TRO-213	ENST00000440759	OPHN1	O60890	802 aa		11.71	□□□□□ -0.53
TRO-213	ENST00000440759	DAB1	O75553	588 aa		11.71	□□□□□ -0.53
TRO-213	ENST00000440759	ATP5B	P06576	529 aa	Known RBP	11.71	□□□□□ -0.53
TRO-213	ENST00000440759	ACADM	P11310	421 aa		11.71	□□□□□ -0.53
TRO-213	ENST00000440759	TFE3	P19532	575 aa	Predicted RBP	11.71	□□□□□ -0.53
TRO-213	ENST00000440759	GGCX	P38435	758 aa		11.71	□□□□□ -0.53
TRO-213	ENST00000440759	STK19	P49842	368 aa	Predicted RBP	11.71	□□□□□ -0.53
TRO-213	ENST00000440759	CENPC	Q03188	943 aa		11.71	□□□□□ -0.53
TRO-213	ENST00000440759	CDH18	Q13634	790 aa		11.71	□□□□□ -0.53
TRO-213	ENST00000440759	E2F5	Q15329	346 aa		11.71	□□□□□ -0.53
TRO-213	ENST00000440759	ST3GAL2	Q16842	350 aa		11.71	□□□□□ -0.53
TRO-213	ENST00000440759	HNRNPA1L2	Q32P51	320 aa	Known RBP	11.71	□□□□□ -0.53
TRO-213	ENST00000440759	CXorf57	Q6NSI4	855 aa	Known RBP	11.71	□□□□□ -0.53
TRO-213	ENST00000440759	SLC26A9	Q7LBE3	791 aa		11.71	□□□□□ -0.53
TRO-213	ENST00000440759	DHX40	Q8IX18	779 aa	Known RBP	11.71	□□□□□ -0.53
TRO-213	ENST00000440759	FAM71A	Q8IYT1	594 aa		11.71	□□□□□ -0.53
TRO-213	ENST00000440759	ZNF557	Q8N988	423 aa	Predicted RBP	11.71	□□□□□ -0.53
TRO-213	ENST00000440759	OR52K2	Q8NGK3	314 aa		11.71	□□□□□ -0.53
TRO-213	ENST00000440759	DDX50	Q9BQ39	737 aa	Known RBP	11.71	□□□□□ -0.53
TRO-213	ENST00000440759	NUP58	Q9BVL2	599 aa		11.71	□□□□□ -0.53
TRO-213	ENST00000440759	NAA15	Q9BXJ9	866 aa	Known RBP	11.71	□□□□□ -0.53
TRO-213	ENST00000440759	MIR1-1HG	Q9H1L0	117 aa		11.71	□□□□□ -0.53
TRO-213	ENST00000440759	NUP62CL	Q9H1M0	184 aa		11.71	□□□□□ -0.53
TRO-213	ENST00000440759	NDST4	Q9H3R1	872 aa		11.71	□□□□□ -0.53
TRO-213	ENST00000440759	FBRS	Q9HAH7	460 aa		11.71	□□□□□ -0.53
TRO-213	ENST00000440759	ANLN	Q9NQW6	1124 aa		11.71	□□□□□ -0.53
TRO-213	ENST00000440759	SAMSN1	Q9NSI8	373 aa	Known RBP	11.71	□□□□□ -0.53
TRO-213	ENST00000440759	ASNSD1	Q9NWL6	643 aa		11.71	□□□□□ -0.53
TRO-213	ENST00000440759	DDIT4	Q9NX09	232 aa		11.71	□□□□□ -0.53
TRO-213	ENST00000440759	ERVW-1	Q9UQF0	538 aa		11.71	□□□□□ -0.53
TRO-213	ENST00000440759	FREM2	Q5SZK8	3169 aa		11.71	□□□□□ -0.53
TRO-213	ENST00000440759	FAM208B	Q5VWN6	2430 aa		11.71	□□□□□ -0.54
TRO-213	ENST00000440759	CHD5	Q8TDI0	1954 aa		11.7	□□□□□ -0.54
TRO-213	ENST00000440759	PLXNB3	Q9ULL4	1909 aa		11.7	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms