RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 TRIM11Q96F44 468 aa18.63■□□□□ 0.57
CPSF4-205ENST00000440514 TRIM7Q9C029 511 aa18.63■□□□□ 0.57
CPSF4-205ENST00000440514 PARVAQ9NVD7 372 aa18.63■□□□□ 0.57
CPSF4-205ENST00000440514 CACNA2D2Q9NY47 1150 aa18.63■□□□□ 0.57
CPSF4-205ENST00000440514 NENFQ9UMX5 172 aa18.63■□□□□ 0.57
CPSF4-205ENST00000440514 A0A1B0GVM2 712 aa18.62■□□□□ 0.57
CPSF4-205ENST00000440514 TCAF2A6NFQ2 919 aa18.62■□□□□ 0.57
CPSF4-205ENST00000440514 H0Y626 953 aa18.62■□□□□ 0.57
CPSF4-205ENST00000440514 GFPT1Q06210 699 aaPredicted RBP18.62■□□□□ 0.57
CPSF4-205ENST00000440514 ZNF252P-AS1Q0IIN9 211 aa18.62■□□□□ 0.57
CPSF4-205ENST00000440514 HSF5Q4G112 596 aaPredicted RBP18.62■□□□□ 0.57
CPSF4-205ENST00000440514 EOGTQ5NDL2 527 aa18.62■□□□□ 0.57
CPSF4-205ENST00000440514 TTC39BQ5VTQ0 682 aaPredicted RBP18.62■□□□□ 0.57
CPSF4-205ENST00000440514 TRMT11Q7Z4G4 463 aaKnown RBP18.62■□□□□ 0.57
CPSF4-205ENST00000440514 KIAA0907Q7Z7F0 614 aaPredicted RBP18.62■□□□□ 0.57
CPSF4-205ENST00000440514 CNGA4Q8IV77 575 aa18.62■□□□□ 0.57
CPSF4-205ENST00000440514 DRC7Q8IY82 874 aa18.62■□□□□ 0.57
CPSF4-205ENST00000440514 ZNF683Q8IZ20 524 aa18.62■□□□□ 0.57
CPSF4-205ENST00000440514 CHPFQ8IZ52 775 aa18.62■□□□□ 0.57
CPSF4-205ENST00000440514 CCAR2Q8N163 923 aaKnown RBP18.62■□□□□ 0.57
CPSF4-205ENST00000440514 CCDC185Q8N715 623 aa18.62■□□□□ 0.57
CPSF4-205ENST00000440514 TSTD1Q8NFU3 115 aa18.62■□□□□ 0.57
CPSF4-205ENST00000440514 FIBINQ8TAL6 211 aa18.62■□□□□ 0.57
CPSF4-205ENST00000440514 ERLEC1Q96DZ1 483 aa18.62■□□□□ 0.57
CPSF4-205ENST00000440514 LMLNQ96KR4 655 aa18.62■□□□□ 0.57
CPSF4-205ENST00000440514 CNPY3Q9BT09 278 aa18.62■□□□□ 0.57
CPSF4-205ENST00000440514 THAP2Q9H0W7 228 aa18.62■□□□□ 0.57
CPSF4-205ENST00000440514 ZNHIT6Q9NWK9 470 aaKnown RBP18.62■□□□□ 0.57
CPSF4-205ENST00000440514 ZSCAN32Q9NX65 697 aa18.62■□□□□ 0.57
CPSF4-205ENST00000440514 AKR1B15C9JRZ8 316 aaPredicted RBP18.61■□□□□ 0.57
CPSF4-205ENST00000440514 MYBL1P10243 752 aa18.61■□□□□ 0.57
CPSF4-205ENST00000440514 HOXB2P14652 356 aa18.61■□□□□ 0.57
CPSF4-205ENST00000440514 NTSR1P30989 418 aa18.61■□□□□ 0.57
CPSF4-205ENST00000440514 NBL1P41271 181 aa18.61■□□□□ 0.57
CPSF4-205ENST00000440514 NUMBP49757 651 aa18.61■□□□□ 0.57
CPSF4-205ENST00000440514 EIF4HQ15056 248 aaKnown RBP18.61■□□□□ 0.57
CPSF4-205ENST00000440514 CRY1Q16526 586 aa18.61■□□□□ 0.57
CPSF4-205ENST00000440514 TSR1Q2NL82 804 aaKnown RBP18.61■□□□□ 0.57
CPSF4-205ENST00000440514 CCDC122Q5T0U0 273 aa18.61■□□□□ 0.57
CPSF4-205ENST00000440514 MBLAC2Q68D91 279 aa18.61■□□□□ 0.57
CPSF4-205ENST00000440514 ALKBH5Q6P6C2 394 aaKnown RBP18.61■□□□□ 0.57
CPSF4-205ENST00000440514 ADIPOR2Q86V24 386 aa18.61■□□□□ 0.57
CPSF4-205ENST00000440514 CCDC117Q8IWD4 279 aaPredicted RBP18.61■□□□□ 0.57
CPSF4-205ENST00000440514 AHI1Q8N157 1196 aa18.61■□□□□ 0.57
CPSF4-205ENST00000440514 ZBTB44Q8NCP5 570 aa18.61■□□□□ 0.57
CPSF4-205ENST00000440514 KCNV2Q8TDN2 545 aa18.61■□□□□ 0.57
CPSF4-205ENST00000440514 MRFAP1L1Q96HT8 127 aa18.61■□□□□ 0.57
CPSF4-205ENST00000440514 CHP1Q99653 195 aa18.61■□□□□ 0.57
CPSF4-205ENST00000440514 ELOVL2Q9NXB9 296 aa18.61■□□□□ 0.57
CPSF4-205ENST00000440514 PCDHGA2Q9Y5H1 932 aa18.61■□□□□ 0.57
CPSF4-205ENST00000440514 RAD54BQ9Y620 910 aa18.61■□□□□ 0.57
CPSF4-205ENST00000440514 SCINQ9Y6U3 715 aa18.61■□□□□ 0.57
CPSF4-205ENST00000440514 TMEM191CA6NGB0 347 aa18.6■□□□□ 0.57
CPSF4-205ENST00000440514 WASH3PC4AMC7 463 aa18.6■□□□□ 0.57
CPSF4-205ENST00000440514 CNTN5O94779 1100 aa18.6■□□□□ 0.57
CPSF4-205ENST00000440514 APBB3O95704 486 aa18.6■□□□□ 0.57
CPSF4-205ENST00000440514 PSMA2P25787 234 aa18.6■□□□□ 0.57
CPSF4-205ENST00000440514 ADRA1BP35368 520 aa18.6■□□□□ 0.57
CPSF4-205ENST00000440514 PLA2G5P39877 138 aa18.6■□□□□ 0.57
CPSF4-205ENST00000440514 MAPK8IP2Q13387 824 aaPredicted RBP18.6■□□□□ 0.57
CPSF4-205ENST00000440514 ZNF234Q14588 700 aa18.6■□□□□ 0.57
CPSF4-205ENST00000440514 ASTE1Q2TB18 679 aaPredicted RBP18.6■□□□□ 0.57
CPSF4-205ENST00000440514 ALFQ53S48 1182 aa18.6■□□□□ 0.57
CPSF4-205ENST00000440514 ARTNQ5T4W7 220 aa18.6■□□□□ 0.57
CPSF4-205ENST00000440514 CXorf57Q6NSI4 855 aaKnown RBP18.6■□□□□ 0.57
CPSF4-205ENST00000440514 SCYL2Q6P3W7 929 aa18.6■□□□□ 0.57
CPSF4-205ENST00000440514 ZC3H14Q6PJT7 736 aaKnown RBP18.6■□□□□ 0.57
CPSF4-205ENST00000440514 ZNF557Q8N988 423 aaPredicted RBP18.6■□□□□ 0.57
CPSF4-205ENST00000440514 TC2NQ8N9U0 490 aa18.6■□□□□ 0.57
CPSF4-205ENST00000440514 CYB5D2Q8WUJ1 264 aa18.6■□□□□ 0.57
CPSF4-205ENST00000440514 UCMAQ8WVF2 138 aa18.6■□□□□ 0.57
CPSF4-205ENST00000440514 ARHGEF26Q96DR7 871 aa18.6■□□□□ 0.57
CPSF4-205ENST00000440514 HAPLN3Q96S86 360 aa18.6■□□□□ 0.57
CPSF4-205ENST00000440514 FAM126AQ9BYI3 521 aaPredicted RBP18.6■□□□□ 0.57
CPSF4-205ENST00000440514 MAGEB5Q9BZ81 275 aa18.6■□□□□ 0.57
CPSF4-205ENST00000440514 DEF6Q9H4E7 631 aa18.6■□□□□ 0.57
CPSF4-205ENST00000440514 THAP10Q9P2Z0 257 aaPredicted RBP18.6■□□□□ 0.57
CPSF4-205ENST00000440514 INTS6Q9UL03 887 aaKnown RBP18.6■□□□□ 0.57
CPSF4-205ENST00000440514 STON1Q9Y6Q2 735 aa18.6■□□□□ 0.57
CPSF4-205ENST00000440514 MYO18AQ92614 2054 aaKnown RBP18.6■□□□□ 0.57
CPSF4-205ENST00000440514 EML5Q05BV3 1969 aa18.59■□□□□ 0.57
CPSF4-205ENST00000440514 SSU72P8A0A1W2PR75 194 aa18.59■□□□□ 0.57
CPSF4-205ENST00000440514 TCRBV21S2A2A0A5A6 115 aa18.59■□□□□ 0.57
CPSF4-205ENST00000440514 E9PAM4 449 aa18.59■□□□□ 0.57
CPSF4-205ENST00000440514 LILRB5O75023 590 aa18.59■□□□□ 0.57
CPSF4-205ENST00000440514 HOXA6P31267 233 aa18.59■□□□□ 0.57
CPSF4-205ENST00000440514 CSKP41240 450 aa18.59■□□□□ 0.57
CPSF4-205ENST00000440514 IL12RB1P42701 662 aa18.59■□□□□ 0.57
CPSF4-205ENST00000440514 NRLP54845 237 aa18.59■□□□□ 0.57
CPSF4-205ENST00000440514 SRSF5Q13243 272 aaKnown RBP18.59■□□□□ 0.57
CPSF4-205ENST00000440514 SLC18A3Q16572 532 aa18.59■□□□□ 0.57
CPSF4-205ENST00000440514 ARL13BQ3SXY8 428 aa18.59■□□□□ 0.57
CPSF4-205ENST00000440514 C5orf22Q49AR2 442 aa18.59■□□□□ 0.57
CPSF4-205ENST00000440514 PITRM1Q5JRX3 1037 aa18.59■□□□□ 0.57
CPSF4-205ENST00000440514 ANO7Q6IWH7 933 aa18.59■□□□□ 0.57
CPSF4-205ENST00000440514 LONP2Q86WA8 852 aa18.59■□□□□ 0.57
CPSF4-205ENST00000440514 CAMKK1Q8N5S9 505 aa18.59■□□□□ 0.57
CPSF4-205ENST00000440514 OR52K2Q8NGK3 314 aa18.59■□□□□ 0.57
CPSF4-205ENST00000440514 ATRIPQ8WXE1 791 aa18.59■□□□□ 0.57
CPSF4-205ENST00000440514 FAM122AQ96E09 287 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms