RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 CXorf38Q8TB03 319 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 SHKBP1Q8TBC3 707 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 ZNF398Q8TD17 642 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 CCT6BQ92526 530 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 LRRC3BQ96PB8 259 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 BCO2Q9BYV7 579 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 CDC42EP4Q9H3Q1 356 aaKnown RBP4.92□□□□□ -1.62
EDEM3-203ENST00000439962 HAUS2Q9NVX0 235 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 DPP7Q9UHL4 492 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 ANAPC5Q9UJX4 755 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 DERAQ9Y315 318 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 PCDHB4Q9Y5E5 795 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 TMEM189-UBE2V1I3L0A0 370 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 TP73O15350 636 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 LIASO43766 372 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 GRAP2O75791 330 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 IL1BP01584 269 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 P4HA1P13674 534 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 ALADP13716 330 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 RRM1P23921 792 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 BRD2P25440 801 aaKnown RBP4.92□□□□□ -1.62
EDEM3-203ENST00000439962 MARCKSL1P49006 195 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 KPNA1P52294 538 aaPredicted RBP4.92□□□□□ -1.62
EDEM3-203ENST00000439962 TDGQ13569 410 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 ZNF268Q14587 947 aaPredicted RBP4.92□□□□□ -1.62
EDEM3-203ENST00000439962 CNGA2Q16280 664 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 HADHQ16836 314 aaKnown RBP4.92□□□□□ -1.62
EDEM3-203ENST00000439962 TFDP3Q5H9I0 405 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 PPP1R26Q5T8A7 1209 aaPredicted RBP4.92□□□□□ -1.62
EDEM3-203ENST00000439962 TPGS1Q6ZTW0 290 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 DENND5BQ6ZUT9 1274 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 ARCQ7LC44 396 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 DNAAF5Q86Y56 855 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 ALLCQ8N6M5 410 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 ADAM32Q8TC27 787 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 EDEM1Q92611 657 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 FBXO32Q969P5 355 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 ALKBH8Q96BT7 664 aaKnown RBP4.92□□□□□ -1.62
EDEM3-203ENST00000439962 RSPRY1Q96DX4 576 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 MAGEB18Q96M61 343 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 ANKRD27Q96NW4 1050 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 GCNAQ96QF7 691 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 PHOX2BQ99453 314 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 SLC46A2Q9BY10 475 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 B3GNT5Q9BYG0 378 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 LINC00597Q9H2U6 94 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 CCSER2Q9H7U1 834 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 ZFP14Q9HCL3 533 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 CYLDQ9NQC7 956 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 CISHQ9NSE2 258 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.92□□□□□ -1.621e-6■■■□□ 16.5
EDEM3-203ENST00000439962 ASIC3Q9UHC3 531 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 CDH7Q9ULB5 785 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 RPL26L1Q9UNX3 145 aaKnown RBP4.92□□□□□ -1.62
EDEM3-203ENST00000439962 SORCS3Q9UPU3 1222 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 BACE2Q9Y5Z0 518 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 WNT6Q9Y6F9 365 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 CFAP69A5D8W1 941 aa4.91□□□□□ -1.62
EDEM3-203ENST00000439962 KRBA1A5PL33 1030 aa4.91□□□□□ -1.62
EDEM3-203ENST00000439962 TMEM221A6NGB7 291 aa4.91□□□□□ -1.62
EDEM3-203ENST00000439962 OR6C75A6NL08 312 aa4.91□□□□□ -1.62
EDEM3-203ENST00000439962 CCT8L1PA6NM43 557 aa4.91□□□□□ -1.62
EDEM3-203ENST00000439962 SIGLEC16A6NMB1 481 aa4.91□□□□□ -1.62
EDEM3-203ENST00000439962 HEPACAM2A8MVW5 462 aa4.91□□□□□ -1.62
EDEM3-203ENST00000439962 M0R296 226 aa4.91□□□□□ -1.62
EDEM3-203ENST00000439962 PPP1R12AO14974 1030 aaPredicted RBP4.91□□□□□ -1.62
EDEM3-203ENST00000439962 TBC1D4O60343 1298 aa4.91□□□□□ -1.62
EDEM3-203ENST00000439962 RASSF9O75901 435 aa4.91□□□□□ -1.62
EDEM3-203ENST00000439962 USP17L7P0C7H9 530 aa4.91□□□□□ -1.62
EDEM3-203ENST00000439962 SETSIPP0DME0 302 aa4.91□□□□□ -1.62
EDEM3-203ENST00000439962 CHN1P15882 459 aa4.91□□□□□ -1.62
EDEM3-203ENST00000439962 HDCP19113 662 aa4.91□□□□□ -1.62
EDEM3-203ENST00000439962 HPDP32754 393 aaPredicted RBP4.91□□□□□ -1.62
EDEM3-203ENST00000439962 PHBP35232 272 aa4.91□□□□□ -1.62
EDEM3-203ENST00000439962 PCK1P35558 622 aa4.91□□□□□ -1.62
EDEM3-203ENST00000439962 ASPAP45381 313 aa4.91□□□□□ -1.62
EDEM3-203ENST00000439962 LHX1P48742 406 aa4.91□□□□□ -1.62
EDEM3-203ENST00000439962 SEC13P55735 322 aa4.91□□□□□ -1.62
EDEM3-203ENST00000439962 MRPL58Q14197 206 aaKnown RBP4.91□□□□□ -1.62
EDEM3-203ENST00000439962 ANKRD20A8PQ5CZ79 823 aa4.91□□□□□ -1.62
EDEM3-203ENST00000439962 RNF43Q68DV7 783 aa4.91□□□□□ -1.62
EDEM3-203ENST00000439962 TRIM67Q6ZTA4 783 aa4.91□□□□□ -1.62
EDEM3-203ENST00000439962 TPRG1Q6ZUI0 275 aa4.91□□□□□ -1.62
EDEM3-203ENST00000439962 TCEAL8Q8IYN2 117 aa4.91□□□□□ -1.62
EDEM3-203ENST00000439962 LRRC52Q8N7C0 313 aa4.91□□□□□ -1.62
EDEM3-203ENST00000439962 CKAP2Q8WWK9 683 aa4.91□□□□□ -1.62
EDEM3-203ENST00000439962 ZNF606Q8WXB4 792 aa4.91□□□□□ -1.62
EDEM3-203ENST00000439962 NECTIN4Q96NY8 510 aa4.91□□□□□ -1.62
EDEM3-203ENST00000439962 SLITRK1Q96PX8 696 aa4.91□□□□□ -1.62
EDEM3-203ENST00000439962 HINFPQ9BQA5 517 aa4.91□□□□□ -1.62
EDEM3-203ENST00000439962 ZCWPW1Q9H0M4 648 aa4.91□□□□□ -1.62
EDEM3-203ENST00000439962 SEMA4AQ9H3S1 761 aa4.91□□□□□ -1.62
EDEM3-203ENST00000439962 ZDHHC7Q9NXF8 308 aa4.91□□□□□ -1.62
EDEM3-203ENST00000439962 DSEQ9UL01 958 aa4.91□□□□□ -1.62
EDEM3-203ENST00000439962 SLC12A4Q9UP95 1085 aa4.91□□□□□ -1.62
EDEM3-203ENST00000439962 ZNF318Q5VUA4 2279 aa4.91□□□□□ -1.62
EDEM3-203ENST00000439962 ABCA7Q8IZY2 2146 aa4.91□□□□□ -1.62
EDEM3-203ENST00000439962 ZNF292O60281 2723 aa4.91□□□□□ -1.62
EDEM3-203ENST00000439962 ZNF638Q14966 1978 aaKnown RBP4.91□□□□□ -1.62
EDEM3-203ENST00000439962 OTOL1A6NHN0 477 aaPredicted RBP4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms