RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 MAOBP27338 520 aa16.84■□□□□ 0.29
SNRPD3-204ENST00000439775 CLCN1P35523 988 aa16.84■□□□□ 0.29
SNRPD3-204ENST00000439775 SNX16P57768 344 aa16.84■□□□□ 0.29
SNRPD3-204ENST00000439775 ST8SIA6P61647 398 aa16.84■□□□□ 0.29
SNRPD3-204ENST00000439775 RPS14P62263 151 aaKnown RBP16.84■□□□□ 0.29
SNRPD3-204ENST00000439775 PITX1P78337 314 aaPredicted RBP16.84■□□□□ 0.29
SNRPD3-204ENST00000439775 CDK17Q00537 523 aa16.84■□□□□ 0.29
SNRPD3-204ENST00000439775 MTA1Q13330 715 aa16.84■□□□□ 0.29
SNRPD3-204ENST00000439775 CT47A1Q5JQC4 288 aaPredicted RBP16.84■□□□□ 0.29
SNRPD3-204ENST00000439775 TTC39BQ5VTQ0 682 aaPredicted RBP16.84■□□□□ 0.29
SNRPD3-204ENST00000439775 DCAF12L1Q5VU92 463 aa16.84■□□□□ 0.29
SNRPD3-204ENST00000439775 RAP1GAP2Q684P5 730 aa16.84■□□□□ 0.29
SNRPD3-204ENST00000439775 OLFML1Q6UWY5 402 aa16.84■□□□□ 0.29
SNRPD3-204ENST00000439775 C11orf57Q6ZUT1 292 aaPredicted RBP16.84■□□□□ 0.29
SNRPD3-204ENST00000439775 SLC47A2Q86VL8 602 aa16.84■□□□□ 0.29
SNRPD3-204ENST00000439775 PASD1Q8IV76 773 aa16.84■□□□□ 0.29
SNRPD3-204ENST00000439775 FAM71AQ8IYT1 594 aa16.84■□□□□ 0.29
SNRPD3-204ENST00000439775 LGI2Q8N0V4 545 aa16.84■□□□□ 0.29
SNRPD3-204ENST00000439775 CFAP52Q8N1V2 620 aa16.84■□□□□ 0.29
SNRPD3-204ENST00000439775 C1orf131Q8NDD1 294 aaKnown RBP16.84■□□□□ 0.29
SNRPD3-204ENST00000439775 MRGPRX3Q96LB0 322 aa16.84■□□□□ 0.29
SNRPD3-204ENST00000439775 PRMT1Q99873 361 aaKnown RBP16.84■□□□□ 0.29
SNRPD3-204ENST00000439775 FAM204AQ9H8W3 233 aa16.84■□□□□ 0.29
SNRPD3-204ENST00000439775 DDIT4Q9NX09 232 aa16.84■□□□□ 0.29
SNRPD3-204ENST00000439775 SLC12A6Q9UHW9 1150 aa16.84■□□□□ 0.29
SNRPD3-204ENST00000439775 CEP83Q9Y592 693 aa16.84■□□□□ 0.29
SNRPD3-204ENST00000439775 PI4KAP42356 2102 aa16.84■□□□□ 0.29
SNRPD3-204ENST00000439775 F5H5T6 163 aa16.83■□□□□ 0.28
SNRPD3-204ENST00000439775 FOXN3O00409 490 aaPredicted RBP16.83■□□□□ 0.28
SNRPD3-204ENST00000439775 GJB3O75712 270 aa16.83■□□□□ 0.28
SNRPD3-204ENST00000439775 MOCS3O95396 460 aa16.83■□□□□ 0.28
SNRPD3-204ENST00000439775 DNTTP04053 509 aa16.83■□□□□ 0.28
SNRPD3-204ENST00000439775 SRPRAP08240 638 aaKnown RBP16.83■□□□□ 0.28
SNRPD3-204ENST00000439775 CCR1P32246 355 aa16.83■□□□□ 0.28
SNRPD3-204ENST00000439775 KRT9P35527 623 aa16.83■□□□□ 0.28
SNRPD3-204ENST00000439775 BPIFB4P59827 614 aa16.83■□□□□ 0.28
SNRPD3-204ENST00000439775 GRIK2Q13002 908 aa16.83■□□□□ 0.28
SNRPD3-204ENST00000439775 SLC14A1Q13336 389 aa16.83■□□□□ 0.28
SNRPD3-204ENST00000439775 HNRNPA1L2Q32P51 320 aaKnown RBP16.83■□□□□ 0.28
SNRPD3-204ENST00000439775 TTC31Q49AM3 519 aaPredicted RBP16.83■□□□□ 0.28
SNRPD3-204ENST00000439775 FSCBQ5H9T9 825 aa16.83■□□□□ 0.28
SNRPD3-204ENST00000439775 PITRM1Q5JRX3 1037 aa16.83■□□□□ 0.28
SNRPD3-204ENST00000439775 ZNF776Q68DI1 518 aaPredicted RBP16.83■□□□□ 0.28
SNRPD3-204ENST00000439775 DPY19L2P1Q6NXN4 242 aa16.83■□□□□ 0.28
SNRPD3-204ENST00000439775 ITIH6Q6UXX5 1313 aa16.83■□□□□ 0.28
SNRPD3-204ENST00000439775 FAM183BPQ6ZVS7 135 aa16.83■□□□□ 0.28
SNRPD3-204ENST00000439775 SLC26A9Q7LBE3 791 aa16.83■□□□□ 0.28
SNRPD3-204ENST00000439775 FAM124AQ86V42 546 aa16.83■□□□□ 0.28
SNRPD3-204ENST00000439775 DEFB106AQ8N104 65 aa16.83■□□□□ 0.28
SNRPD3-204ENST00000439775 ZCCHC9Q8N567 271 aaKnown RBP16.83■□□□□ 0.28
SNRPD3-204ENST00000439775 RSPH9Q9H1X1 276 aaPredicted RBP16.83■□□□□ 0.28
SNRPD3-204ENST00000439775 KIAA1522Q9P206 1035 aaPredicted RBP16.83■□□□□ 0.28
SNRPD3-204ENST00000439775 SCML1Q9UN30 329 aa16.83■□□□□ 0.28
SNRPD3-204ENST00000439775 WASF3Q9UPY6 502 aa16.83■□□□□ 0.28
SNRPD3-204ENST00000439775 H0Y626 953 aa16.82■□□□□ 0.28
SNRPD3-204ENST00000439775 BCAT2O15382 392 aaPredicted RBP16.82■□□□□ 0.28
SNRPD3-204ENST00000439775 DAB1O75553 588 aa16.82■□□□□ 0.28
SNRPD3-204ENST00000439775 ERBB2P04626 1255 aa16.82■□□□□ 0.28
SNRPD3-204ENST00000439775 PNMA6AP0CW24 399 aaPredicted RBP16.82■□□□□ 0.28
SNRPD3-204ENST00000439775 ABCB4P21439 1286 aa16.82■□□□□ 0.28
SNRPD3-204ENST00000439775 ACSL1P33121 698 aa16.82■□□□□ 0.28
SNRPD3-204ENST00000439775 SLC12A1Q13621 1099 aa16.82■□□□□ 0.28
SNRPD3-204ENST00000439775 PTPN20Q4JDL3 420 aa16.82■□□□□ 0.28
SNRPD3-204ENST00000439775 MMS22LQ6ZRQ5 1243 aa16.82■□□□□ 0.28
SNRPD3-204ENST00000439775 USP30Q70CQ3 517 aa16.82■□□□□ 0.28
SNRPD3-204ENST00000439775 ZDHHC17Q8IUH5 632 aa16.82■□□□□ 0.28
SNRPD3-204ENST00000439775 ZNF397Q8NF99 534 aaPredicted RBP16.82■□□□□ 0.28
SNRPD3-204ENST00000439775 OR2I1PQ8NGU4 316 aa16.82■□□□□ 0.28
SNRPD3-204ENST00000439775 C1orf216Q8TAB5 229 aa16.82■□□□□ 0.28
SNRPD3-204ENST00000439775 BTBD1Q9H0C5 482 aa16.82■□□□□ 0.28
SNRPD3-204ENST00000439775 ERVW-1Q9UQF0 538 aa16.82■□□□□ 0.28
SNRPD3-204ENST00000439775 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.82■□□□□ 0.28
SNRPD3-204ENST00000439775 ASCC3Q8N3C0 2202 aaKnown RBP16.82■□□□□ 0.28
SNRPD3-204ENST00000439775 KMT2BQ9UMN6 2715 aaPredicted RBP16.82■□□□□ 0.28
SNRPD3-204ENST00000439775 CEP295Q9C0D2 2601 aa16.82■□□□□ 0.28
SNRPD3-204ENST00000439775 CACNA1EQ15878 2313 aa16.81■□□□□ 0.28
SNRPD3-204ENST00000439775 A0A1B0GVM2 712 aa16.81■□□□□ 0.28
SNRPD3-204ENST00000439775 TCAF2A6NFQ2 919 aa16.81■□□□□ 0.28
SNRPD3-204ENST00000439775 SEMA4FO95754 770 aa16.81■□□□□ 0.28
SNRPD3-204ENST00000439775 CD59P13987 128 aa16.81■□□□□ 0.28
SNRPD3-204ENST00000439775 EEF1GP26641 437 aaKnown RBP16.81■□□□□ 0.28
SNRPD3-204ENST00000439775 CDH5P33151 784 aaPredicted RBP16.81■□□□□ 0.28
SNRPD3-204ENST00000439775 SLC6A3Q01959 620 aa16.81■□□□□ 0.28
SNRPD3-204ENST00000439775 HNRNPDQ14103 355 aaKnown RBP16.81■□□□□ 0.28
SNRPD3-204ENST00000439775 KCNJ12Q14500 433 aa16.81■□□□□ 0.28
SNRPD3-204ENST00000439775 HSP90AA4PQ58FG1 418 aa16.81■□□□□ 0.28
SNRPD3-204ENST00000439775 RABGAP1LQ5R372 815 aa16.81■□□□□ 0.28
SNRPD3-204ENST00000439775 KLHDC7AQ5VTJ3 777 aa16.81■□□□□ 0.28
SNRPD3-204ENST00000439775 OR6B2Q6IFH4 312 aa16.81■□□□□ 0.28
SNRPD3-204ENST00000439775 MIR1-1HGQ9H1L0 117 aa16.81■□□□□ 0.28
SNRPD3-204ENST00000439775 C6orf106Q9H6K1 298 aaPredicted RBP16.81■□□□□ 0.28
SNRPD3-204ENST00000439775 SYNCQ9H7C4 482 aa16.81■□□□□ 0.28
SNRPD3-204ENST00000439775 SGK2Q9HBY8 427 aa16.81■□□□□ 0.28
SNRPD3-204ENST00000439775 RRN3Q9NYV6 651 aa16.81■□□□□ 0.28
SNRPD3-204ENST00000439775 EIF2B4Q9UI10 523 aaKnown RBP16.81■□□□□ 0.28
SNRPD3-204ENST00000439775 FHOD1Q9Y613 1164 aa16.81■□□□□ 0.28
SNRPD3-204ENST00000439775 TARSL2A2RTX5 802 aaKnown RBP16.8■□□□□ 0.28
SNRPD3-204ENST00000439775 RNASEH1O60930 286 aaKnown RBP16.8■□□□□ 0.28
SNRPD3-204ENST00000439775 SIN3BO75182 1162 aa16.8■□□□□ 0.28
SNRPD3-204ENST00000439775 GRAP2O75791 330 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms