RNA–Protein interactions for RNA: ENST00000439706.5

SLC38A1-202, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 3,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-202ENST00000439706 SLC5A3P53794 718 aa12.72□□□□□ -0.37
SLC38A1-202ENST00000439706 PLOD1Q02809 727 aaPredicted RBP12.72□□□□□ -0.37
SLC38A1-202ENST00000439706 STILQ15468 1287 aa12.72□□□□□ -0.37
SLC38A1-202ENST00000439706 SNRNP48Q6IEG0 339 aaKnown RBP12.72□□□□□ -0.37
SLC38A1-202ENST00000439706 PACS1Q6VY07 963 aa12.72□□□□□ -0.37
SLC38A1-202ENST00000439706 ACVR1CQ8NER5 493 aa12.72□□□□□ -0.37
SLC38A1-202ENST00000439706 CDKL2Q92772 493 aa12.72□□□□□ -0.37
SLC38A1-202ENST00000439706 C1orf21Q9H246 121 aa12.72□□□□□ -0.37
SLC38A1-202ENST00000439706 FETUBQ9UGM5 382 aa12.72□□□□□ -0.37
SLC38A1-202ENST00000439706 SLC39A10Q9ULF5 831 aa12.72□□□□□ -0.37
SLC38A1-202ENST00000439706 TCRBV5S1A1TA0A578 114 aa12.72□□□□□ -0.37
SLC38A1-202ENST00000439706 PLOD2O00469 737 aa12.72□□□□□ -0.37
SLC38A1-202ENST00000439706 THRAP10827 490 aa12.72□□□□□ -0.37
SLC38A1-202ENST00000439706 UGT1A6P19224 532 aa12.72□□□□□ -0.37
SLC38A1-202ENST00000439706 MX2P20592 715 aa12.72□□□□□ -0.37
SLC38A1-202ENST00000439706 EIF4BP23588 611 aaKnown RBP12.72□□□□□ -0.37
SLC38A1-202ENST00000439706 GABRB2P47870 512 aa12.72□□□□□ -0.37
SLC38A1-202ENST00000439706 MTTPP55157 894 aa12.72□□□□□ -0.37
SLC38A1-202ENST00000439706 SP2Q02086 613 aa12.72□□□□□ -0.37
SLC38A1-202ENST00000439706 TP53INP2Q8IXH6 220 aa12.72□□□□□ -0.37
SLC38A1-202ENST00000439706 JADE3Q92613 823 aa12.72□□□□□ -0.37
SLC38A1-202ENST00000439706 KLHL32Q96NJ5 620 aa12.72□□□□□ -0.37
SLC38A1-202ENST00000439706 TRIM8Q9BZR9 551 aa12.72□□□□□ -0.37
SLC38A1-202ENST00000439706 EBF1Q9UH73 591 aa12.72□□□□□ -0.37
SLC38A1-202ENST00000439706 SFMBT1Q9UHJ3 866 aa12.72□□□□□ -0.37
SLC38A1-202ENST00000439706 RBMX2Q9Y388 322 aaKnown RBP12.72□□□□□ -0.37
SLC38A1-202ENST00000439706 GSRP00390 522 aa12.72□□□□□ -0.37
SLC38A1-202ENST00000439706 TNNC2P02585 160 aa12.72□□□□□ -0.37
SLC38A1-202ENST00000439706 CDH2P19022 906 aaPredicted RBP12.72□□□□□ -0.37
SLC38A1-202ENST00000439706 TSPAN8P19075 237 aa12.72□□□□□ -0.37
SLC38A1-202ENST00000439706 GPD1P21695 349 aa12.72□□□□□ -0.37
SLC38A1-202ENST00000439706 NR4A1P22736 598 aa12.72□□□□□ -0.37
SLC38A1-202ENST00000439706 EPHX2P34913 555 aa12.72□□□□□ -0.37
SLC38A1-202ENST00000439706 CSE1LP55060 971 aaKnown RBP12.72□□□□□ -0.37
SLC38A1-202ENST00000439706 ZNF460Q14592 562 aa12.72□□□□□ -0.37
SLC38A1-202ENST00000439706 FSCBQ5H9T9 825 aa12.72□□□□□ -0.37
SLC38A1-202ENST00000439706 PGM2L1Q6PCE3 622 aa12.72□□□□□ -0.37
SLC38A1-202ENST00000439706 STRA8Q7Z7C7 330 aa12.72□□□□□ -0.37
SLC38A1-202ENST00000439706 CMASQ8NFW8 434 aaPredicted RBP12.72□□□□□ -0.37
SLC38A1-202ENST00000439706 FAM110BQ8TC76 370 aa12.72□□□□□ -0.37
SLC38A1-202ENST00000439706 ZNF669Q96BR6 464 aaPredicted RBP12.72□□□□□ -0.37
SLC38A1-202ENST00000439706 APBA2Q99767 749 aa12.72□□□□□ -0.37
SLC38A1-202ENST00000439706 TASP1Q9H6P5 420 aa12.72□□□□□ -0.37
SLC38A1-202ENST00000439706 WDR41Q9HAD4 459 aa12.72□□□□□ -0.37
SLC38A1-202ENST00000439706 ITGA11Q9UKX5 1188 aa12.72□□□□□ -0.37
SLC38A1-202ENST00000439706 J3QRK9 145 aa12.71□□□□□ -0.37
SLC38A1-202ENST00000439706 SPAG6O75602 509 aa12.71□□□□□ -0.37
SLC38A1-202ENST00000439706 IMPDH2P12268 514 aa12.71□□□□□ -0.37
SLC38A1-202ENST00000439706 GRM2Q14416 872 aa12.71□□□□□ -0.37
SLC38A1-202ENST00000439706 TBCCQ15814 346 aa12.71□□□□□ -0.37
SLC38A1-202ENST00000439706 LSM12Q3MHD2 195 aaKnown RBP12.71□□□□□ -0.37
SLC38A1-202ENST00000439706 SLFN12LQ6IEE8 588 aa12.71□□□□□ -0.37
SLC38A1-202ENST00000439706 OGFOD2Q6N063 350 aa12.71□□□□□ -0.37
SLC38A1-202ENST00000439706 PPP1R2P3Q6NXS1 205 aa12.71□□□□□ -0.37
SLC38A1-202ENST00000439706 FAM183BPQ6ZVS7 135 aa12.71□□□□□ -0.37
SLC38A1-202ENST00000439706 ZNF410Q86VK4 478 aa12.71□□□□□ -0.37
SLC38A1-202ENST00000439706 SULF1Q8IWU6 871 aa12.71□□□□□ -0.37
SLC38A1-202ENST00000439706 FBXL8Q96CD0 374 aa12.71□□□□□ -0.37
SLC38A1-202ENST00000439706 SNRNP25Q9BV90 132 aaKnown RBP12.71□□□□□ -0.37
SLC38A1-202ENST00000439706 DNAJB4Q9UDY4 337 aa12.71□□□□□ -0.37
SLC38A1-202ENST00000439706 STRCQ7RTU9 1775 aa12.71□□□□□ -0.37
SLC38A1-202ENST00000439706 PDLIM1O00151 329 aa12.71□□□□□ -0.37
SLC38A1-202ENST00000439706 PENKP01210 267 aaPredicted RBP12.71□□□□□ -0.37
SLC38A1-202ENST00000439706 MT-ND1P03886 318 aa12.71□□□□□ -0.37
SLC38A1-202ENST00000439706 CYP2F1P24903 491 aa12.71□□□□□ -0.37
SLC38A1-202ENST00000439706 FAM47BQ8NA70 645 aa12.71□□□□□ -0.37
SLC38A1-202ENST00000439706 CLEC4CQ8WTT0 213 aa12.71□□□□□ -0.37
SLC38A1-202ENST00000439706 THAP11Q96EK4 314 aa12.71□□□□□ -0.37
SLC38A1-202ENST00000439706 SERPINI1Q99574 410 aa12.71□□□□□ -0.37
SLC38A1-202ENST00000439706 SDCBP2Q9H190 292 aa12.71□□□□□ -0.37
SLC38A1-202ENST00000439706 RPAP3Q9H6T3 665 aaPredicted RBP12.71□□□□□ -0.37
SLC38A1-202ENST00000439706 ZNF302Q9NR11 478 aa12.71□□□□□ -0.37
SLC38A1-202ENST00000439706 SYBUQ9NX95 663 aa12.71□□□□□ -0.37
SLC38A1-202ENST00000439706 CCDC167Q9P0B6 97 aa12.71□□□□□ -0.37
SLC38A1-202ENST00000439706 ZNF70Q9UC06 446 aaPredicted RBP12.71□□□□□ -0.37
SLC38A1-202ENST00000439706 RSL24D1Q9UHA3 163 aaKnown RBP12.71□□□□□ -0.37
SLC38A1-202ENST00000439706 CDC14AQ9UNH5 594 aa12.71□□□□□ -0.37
SLC38A1-202ENST00000439706 DMTF1Q9Y222 760 aa12.71□□□□□ -0.37
SLC38A1-202ENST00000439706 ATP6AP2A0A1C7CYW4 349 aa12.71□□□□□ -0.38
SLC38A1-202ENST00000439706 C7orf72A4D263 438 aa12.71□□□□□ -0.38
SLC38A1-202ENST00000439706 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.71□□□□□ -0.38
SLC38A1-202ENST00000439706 GIPC1O14908 333 aa12.71□□□□□ -0.38
SLC38A1-202ENST00000439706 AKAP10O43572 662 aa12.71□□□□□ -0.38
SLC38A1-202ENST00000439706 HCRTO43612 131 aa12.71□□□□□ -0.38
SLC38A1-202ENST00000439706 GLRA3O75311 464 aa12.71□□□□□ -0.38
SLC38A1-202ENST00000439706 ATP6AP2O75787 350 aa12.71□□□□□ -0.38
SLC38A1-202ENST00000439706 FBXO21O94952 628 aa12.71□□□□□ -0.38
SLC38A1-202ENST00000439706 LYPLA2O95372 231 aa12.71□□□□□ -0.38
SLC38A1-202ENST00000439706 C1QAP02745 245 aa12.71□□□□□ -0.38
SLC38A1-202ENST00000439706 DPP6P42658 865 aa12.71□□□□□ -0.38
SLC38A1-202ENST00000439706 YAP1P46937 504 aaKnown RBP12.71□□□□□ -0.38
SLC38A1-202ENST00000439706 PLK1P53350 603 aa12.71□□□□□ -0.38
SLC38A1-202ENST00000439706 MPP3Q13368 585 aa12.71□□□□□ -0.38
SLC38A1-202ENST00000439706 CAPSQ13938 189 aa12.71□□□□□ -0.38
SLC38A1-202ENST00000439706 OGFRL1Q5TC84 451 aaPredicted RBP12.71□□□□□ -0.38
SLC38A1-202ENST00000439706 GK5Q6ZS86 529 aa12.71□□□□□ -0.38
SLC38A1-202ENST00000439706 FAM131BQ86XD5 332 aa12.71□□□□□ -0.38
SLC38A1-202ENST00000439706 PDCD6IPQ8WUM4 868 aaKnown RBP12.71□□□□□ -0.38
SLC38A1-202ENST00000439706 FAM149B1Q96BN6 582 aa12.71□□□□□ -0.38
SLC38A1-202ENST00000439706 SLC29A1Q99808 456 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms