RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 HSP90AA4PQ58FG1 418 aa21.02■□□□□ 0.96
NCKIPSD-206ENST00000439518 RAP1GAP2Q684P5 730 aa21.02■□□□□ 0.96
NCKIPSD-206ENST00000439518 MMS22LQ6ZRQ5 1243 aa21.02■□□□□ 0.96
NCKIPSD-206ENST00000439518 LGI2Q8N0V4 545 aa21.02■□□□□ 0.96
NCKIPSD-206ENST00000439518 DEFB106AQ8N104 65 aa21.02■□□□□ 0.96
NCKIPSD-206ENST00000439518 MINDY1Q8N5J2 469 aa21.02■□□□□ 0.96
NCKIPSD-206ENST00000439518 KDM1BQ8NB78 822 aa21.02■□□□□ 0.96
NCKIPSD-206ENST00000439518 C1orf131Q8NDD1 294 aaKnown RBP21.02■□□□□ 0.96
NCKIPSD-206ENST00000439518 DEFB124Q8NES8 71 aa21.02■□□□□ 0.96
NCKIPSD-206ENST00000439518 OR2I1PQ8NGU4 316 aa21.02■□□□□ 0.96
NCKIPSD-206ENST00000439518 MRGPRX3Q96LB0 322 aa21.02■□□□□ 0.96
NCKIPSD-206ENST00000439518 SUN2Q9UH99 717 aa21.02■□□□□ 0.96
NCKIPSD-206ENST00000439518 USP24Q9UPU5 2620 aa21.02■□□□□ 0.96
NCKIPSD-206ENST00000439518 NUMA1Q14980 2115 aa21.01■□□□□ 0.95
NCKIPSD-206ENST00000439518 MEI4A8MW99 385 aa21.01■□□□□ 0.95
NCKIPSD-206ENST00000439518 HSF2BPO75031 334 aa21.01■□□□□ 0.95
NCKIPSD-206ENST00000439518 ERBB2P04626 1255 aa21.01■□□□□ 0.95
NCKIPSD-206ENST00000439518 SYPP08247 313 aa21.01■□□□□ 0.95
NCKIPSD-206ENST00000439518 PRKCSHP14314 528 aaPredicted RBP21.01■□□□□ 0.95
NCKIPSD-206ENST00000439518 KRT9P35527 623 aa21.01■□□□□ 0.95
NCKIPSD-206ENST00000439518 ZNF252P-AS1Q0IIN9 211 aa21.01■□□□□ 0.95
NCKIPSD-206ENST00000439518 KCNMA1Q12791 1236 aa21.01■□□□□ 0.95
NCKIPSD-206ENST00000439518 CDH18Q13634 790 aa21.01■□□□□ 0.95
NCKIPSD-206ENST00000439518 ARID5BQ14865 1188 aa21.01■□□□□ 0.95
NCKIPSD-206ENST00000439518 CT47A1Q5JQC4 288 aaPredicted RBP21.01■□□□□ 0.95
NCKIPSD-206ENST00000439518 PITRM1Q5JRX3 1037 aa21.01■□□□□ 0.95
NCKIPSD-206ENST00000439518 DCAF12L1Q5VU92 463 aa21.01■□□□□ 0.95
NCKIPSD-206ENST00000439518 OLFML1Q6UWY5 402 aa21.01■□□□□ 0.95
NCKIPSD-206ENST00000439518 C11orf57Q6ZUT1 292 aaPredicted RBP21.01■□□□□ 0.95
NCKIPSD-206ENST00000439518 FAM183BPQ6ZVS7 135 aa21.01■□□□□ 0.95
NCKIPSD-206ENST00000439518 FAM124AQ86V42 546 aa21.01■□□□□ 0.95
NCKIPSD-206ENST00000439518 CHSY1Q86X52 802 aa21.01■□□□□ 0.95
NCKIPSD-206ENST00000439518 ATP6V0D2Q8N8Y2 350 aa21.01■□□□□ 0.95
NCKIPSD-206ENST00000439518 NOX5Q96PH1 765 aa21.01■□□□□ 0.95
NCKIPSD-206ENST00000439518 PRMT1Q99873 361 aaKnown RBP21.01■□□□□ 0.95
NCKIPSD-206ENST00000439518 MTG2Q9H4K7 406 aa21.01■□□□□ 0.95
NCKIPSD-206ENST00000439518 SAMSN1Q9NSI8 373 aaKnown RBP21.01■□□□□ 0.95
NCKIPSD-206ENST00000439518 DNAAF2Q9NVR5 837 aaKnown RBP21.01■□□□□ 0.95
NCKIPSD-206ENST00000439518 DDIT4Q9NX09 232 aa21.01■□□□□ 0.95
NCKIPSD-206ENST00000439518 A0A1B0GTW7 788 aa21■□□□□ 0.95
NCKIPSD-206ENST00000439518 OPHN1O60890 802 aa21■□□□□ 0.95
NCKIPSD-206ENST00000439518 GJB3O75712 270 aa21■□□□□ 0.95
NCKIPSD-206ENST00000439518 SLC2A3P11169 496 aa21■□□□□ 0.95
NCKIPSD-206ENST00000439518 ACSL1P33121 698 aa21■□□□□ 0.95
NCKIPSD-206ENST00000439518 BPIFB4P59827 614 aa21■□□□□ 0.95
NCKIPSD-206ENST00000439518 HNRNPA1L2Q32P51 320 aaKnown RBP21■□□□□ 0.95
NCKIPSD-206ENST00000439518 PTPN20Q4JDL3 420 aa21■□□□□ 0.95
NCKIPSD-206ENST00000439518 SLC26A9Q7LBE3 791 aa21■□□□□ 0.95
NCKIPSD-206ENST00000439518 CCDC117Q8IWD4 279 aaPredicted RBP21■□□□□ 0.95
NCKIPSD-206ENST00000439518 HDDC3Q8N4P3 179 aa21■□□□□ 0.95
NCKIPSD-206ENST00000439518 C1orf216Q8TAB5 229 aa21■□□□□ 0.95
NCKIPSD-206ENST00000439518 RSPH9Q9H1X1 276 aaPredicted RBP21■□□□□ 0.95
NCKIPSD-206ENST00000439518 FAM204AQ9H8W3 233 aa21■□□□□ 0.95
NCKIPSD-206ENST00000439518 LMBRD1Q9NUN5 540 aa21■□□□□ 0.95
NCKIPSD-206ENST00000439518 KIAA1522Q9P206 1035 aaPredicted RBP21■□□□□ 0.95
NCKIPSD-206ENST00000439518 SLC12A6Q9UHW9 1150 aa21■□□□□ 0.95
NCKIPSD-206ENST00000439518 WASF3Q9UPY6 502 aa21■□□□□ 0.95
NCKIPSD-206ENST00000439518 KNL1Q8NG31 2342 aa20.99■□□□□ 0.95
NCKIPSD-206ENST00000439518 H0Y626 953 aa20.99■□□□□ 0.95
NCKIPSD-206ENST00000439518 GRAP2O75791 330 aa20.99■□□□□ 0.95
NCKIPSD-206ENST00000439518 CD59P13987 128 aa20.99■□□□□ 0.95
NCKIPSD-206ENST00000439518 CCR1P32246 355 aa20.99■□□□□ 0.95
NCKIPSD-206ENST00000439518 SNX16P57768 344 aa20.99■□□□□ 0.95
NCKIPSD-206ENST00000439518 ST8SIA6P61647 398 aa20.99■□□□□ 0.95
NCKIPSD-206ENST00000439518 KCNJ12Q14500 433 aa20.99■□□□□ 0.95
NCKIPSD-206ENST00000439518 DRAP1Q14919 205 aaPredicted RBP20.99■□□□□ 0.95
NCKIPSD-206ENST00000439518 KLHDC7AQ5VTJ3 777 aa20.99■□□□□ 0.95
NCKIPSD-206ENST00000439518 ZNF776Q68DI1 518 aaPredicted RBP20.99■□□□□ 0.95
NCKIPSD-206ENST00000439518 OR6B2Q6IFH4 312 aa20.99■□□□□ 0.95
NCKIPSD-206ENST00000439518 ZCCHC9Q8N567 271 aaKnown RBP20.99■□□□□ 0.95
NCKIPSD-206ENST00000439518 ZNF397Q8NF99 534 aaPredicted RBP20.99■□□□□ 0.95
NCKIPSD-206ENST00000439518 NAA15Q9BXJ9 866 aaKnown RBP20.99■□□□□ 0.95
NCKIPSD-206ENST00000439518 ZDHHC5Q9C0B5 715 aa20.99■□□□□ 0.95
NCKIPSD-206ENST00000439518 SLC32A1Q9H598 525 aa20.99■□□□□ 0.95
NCKIPSD-206ENST00000439518 PLCB1Q9NQ66 1216 aa20.99■□□□□ 0.95
NCKIPSD-206ENST00000439518 ERVW-1Q9UQF0 538 aa20.99■□□□□ 0.95
NCKIPSD-206ENST00000439518 FHOD1Q9Y613 1164 aa20.99■□□□□ 0.95
NCKIPSD-206ENST00000439518 FRYQ5TBA9 3013 aa20.98■□□□□ 0.95
NCKIPSD-206ENST00000439518 F5H5T6 163 aa20.98■□□□□ 0.95
NCKIPSD-206ENST00000439518 SRPRAP08240 638 aaKnown RBP20.98■□□□□ 0.95
NCKIPSD-206ENST00000439518 ABCB4P21439 1286 aa20.98■□□□□ 0.95
NCKIPSD-206ENST00000439518 CTSOP43234 321 aaPredicted RBP20.98■□□□□ 0.95
NCKIPSD-206ENST00000439518 SLC6A3Q01959 620 aa20.98■□□□□ 0.95
NCKIPSD-206ENST00000439518 GRIK2Q13002 908 aa20.98■□□□□ 0.95
NCKIPSD-206ENST00000439518 TCP11X2Q5H9J9 407 aa20.98■□□□□ 0.95
NCKIPSD-206ENST00000439518 APCDD1Q8J025 514 aa20.98■□□□□ 0.95
NCKIPSD-206ENST00000439518 MIR1-1HGQ9H1L0 117 aa20.98■□□□□ 0.95
NCKIPSD-206ENST00000439518 C6orf106Q9H6K1 298 aaPredicted RBP20.98■□□□□ 0.95
NCKIPSD-206ENST00000439518 EIF2B4Q9UI10 523 aaKnown RBP20.98■□□□□ 0.95
NCKIPSD-206ENST00000439518 CEP83Q9Y592 693 aa20.98■□□□□ 0.95
NCKIPSD-206ENST00000439518 SYNJ2BP-COX16A0A087WUM0 186 aa20.97■□□□□ 0.95
NCKIPSD-206ENST00000439518 BCAT2O15382 392 aaPredicted RBP20.97■□□□□ 0.95
NCKIPSD-206ENST00000439518 SIN3BO75182 1162 aa20.97■□□□□ 0.95
NCKIPSD-206ENST00000439518 DAB1O75553 588 aa20.97■□□□□ 0.95
NCKIPSD-206ENST00000439518 MOCS3O95396 460 aa20.97■□□□□ 0.95
NCKIPSD-206ENST00000439518 DNTTP04053 509 aa20.97■□□□□ 0.95
NCKIPSD-206ENST00000439518 EEF1GP26641 437 aaKnown RBP20.97■□□□□ 0.95
NCKIPSD-206ENST00000439518 CDH5P33151 784 aaPredicted RBP20.97■□□□□ 0.95
NCKIPSD-206ENST00000439518 NOS2P35228 1153 aa20.97■□□□□ 0.95
NCKIPSD-206ENST00000439518 ECT2LQ008S8 904 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms