RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 CEP112Q8N8E3 955 aa21.34■■□□□ 1.01
CHD3-204ENST00000439235 BPIFB1Q8TDL5 484 aa21.34■■□□□ 1.01
CHD3-204ENST00000439235 HERPUD2Q9BSE4 406 aa21.34■■□□□ 1.01
CHD3-204ENST00000439235 ZFP14Q9HCL3 533 aa21.34■■□□□ 1.01
CHD3-204ENST00000439235 DENND4AQ7Z401 1863 aa21.34■■□□□ 1.01
CHD3-204ENST00000439235 GRXCR2A6NFK2 248 aa21.33■■□□□ 1.01
CHD3-204ENST00000439235 DRGXA6NNA5 263 aa21.33■■□□□ 1.01
CHD3-204ENST00000439235 WASH4PA8MWX3 477 aa21.33■■□□□ 1.01
CHD3-204ENST00000439235 KRIT1O00522 736 aa21.33■■□□□ 1.01
CHD3-204ENST00000439235 SCAMP3O14828 347 aaKnown RBP21.33■■□□□ 1.01
CHD3-204ENST00000439235 DCLK1O15075 740 aa21.33■■□□□ 1.01
CHD3-204ENST00000439235 MBTPS2O43462 519 aa21.33■■□□□ 1.01
CHD3-204ENST00000439235 LAMP2P13473 410 aa21.33■■□□□ 1.01
CHD3-204ENST00000439235 SERPINB6P35237 376 aa21.33■■□□□ 1.01
CHD3-204ENST00000439235 RFWD3Q6PCD5 774 aa21.33■■□□□ 1.01
CHD3-204ENST00000439235 ZNF572Q7Z3I7 529 aaPredicted RBP21.33■■□□□ 1.01
CHD3-204ENST00000439235 ADAT2Q7Z6V5 191 aaKnown RBP21.33■■□□□ 1.01
CHD3-204ENST00000439235 HJURPQ8NCD3 748 aaPredicted RBP21.33■■□□□ 1.01
CHD3-204ENST00000439235 RIN3Q8TB24 985 aa21.33■■□□□ 1.01
CHD3-204ENST00000439235 PRICKLE1Q96MT3 831 aaPredicted RBP21.33■■□□□ 1.01
CHD3-204ENST00000439235 HEPACAM2A8MVW5 462 aa21.32■■□□□ 1
CHD3-204ENST00000439235 APOC4-APOC2K7ER74 178 aa21.32■■□□□ 1
CHD3-204ENST00000439235 PDE2AO00408 941 aaPredicted RBP21.32■■□□□ 1
CHD3-204ENST00000439235 APOC2P02655 101 aa21.32■■□□□ 1
CHD3-204ENST00000439235 FCARP24071 287 aa21.32■■□□□ 1
CHD3-204ENST00000439235 VIPR2P41587 438 aa21.32■■□□□ 1
CHD3-204ENST00000439235 ADCY2Q08462 1091 aa21.32■■□□□ 1
CHD3-204ENST00000439235 NCBP2-AS2Q69YL0 99 aa21.32■■□□□ 1
CHD3-204ENST00000439235 MTSS1LQ765P7 747 aa21.32■■□□□ 1
CHD3-204ENST00000439235 PLD5Q8N7P1 536 aa21.32■■□□□ 1
CHD3-204ENST00000439235 RTL3Q8N8U3 475 aaKnown RBP21.32■■□□□ 1
CHD3-204ENST00000439235 TDRD5Q8NAT2 981 aaKnown RBP21.32■■□□□ 1
CHD3-204ENST00000439235 IGSF8Q969P0 613 aa21.32■■□□□ 1
CHD3-204ENST00000439235 RPGRIP1Q96KN7 1286 aa21.32■■□□□ 1
CHD3-204ENST00000439235 FRMD8P1Q9BZ68 369 aaPredicted RBP21.32■■□□□ 1
CHD3-204ENST00000439235 HOMER3Q9NSC5 361 aa21.32■■□□□ 1
CHD3-204ENST00000439235 THG1LQ9NWX6 298 aaKnown RBP21.32■■□□□ 1
CHD3-204ENST00000439235 EPS15L1Q9UBC2 864 aa21.32■■□□□ 1
CHD3-204ENST00000439235 DOCK6Q96HP0 2047 aa21.31■■□□□ 1
CHD3-204ENST00000439235 A0A1B0GVM2 712 aa21.31■■□□□ 1
CHD3-204ENST00000439235 TCRBV7S2A1N4TA0A589 114 aa21.31■■□□□ 1
CHD3-204ENST00000439235 TCAF2A6NFQ2 919 aa21.31■■□□□ 1
CHD3-204ENST00000439235 CCDC188H7C350 402 aa21.31■■□□□ 1
CHD3-204ENST00000439235 GFRA2O00451 464 aa21.31■■□□□ 1
CHD3-204ENST00000439235 TSPAN3O60637 253 aa21.31■■□□□ 1
CHD3-204ENST00000439235 CYBBP04839 570 aa21.31■■□□□ 1
CHD3-204ENST00000439235 IFNAR2P48551 515 aa21.31■■□□□ 1
CHD3-204ENST00000439235 NR2C2P49116 596 aa21.31■■□□□ 1
CHD3-204ENST00000439235 VCPP55072 806 aaKnown RBP21.31■■□□□ 1
CHD3-204ENST00000439235 CDH4P55283 916 aa21.31■■□□□ 1
CHD3-204ENST00000439235 PAFAH1B3Q15102 231 aaKnown RBP21.31■■□□□ 1
CHD3-204ENST00000439235 MPPE1Q53F39 396 aa21.31■■□□□ 1
CHD3-204ENST00000439235 ARTNQ5T4W7 220 aa21.31■■□□□ 1
CHD3-204ENST00000439235 BZW1Q7L1Q6 419 aaKnown RBP21.31■■□□□ 1
CHD3-204ENST00000439235 CHST9Q7L1S5 443 aa21.31■■□□□ 1
CHD3-204ENST00000439235 LZTR1Q8N653 840 aa21.31■■□□□ 1
CHD3-204ENST00000439235 P3H4Q92791 437 aa21.31■■□□□ 1
CHD3-204ENST00000439235 RSPRY1Q96DX4 576 aa21.31■■□□□ 1
CHD3-204ENST00000439235 AP1M1Q9BXS5 423 aa21.31■■□□□ 1
CHD3-204ENST00000439235 TMEM248Q9NWD8 314 aa21.31■■□□□ 1
CHD3-204ENST00000439235 MPP6Q9NZW5 540 aa21.31■■□□□ 1
CHD3-204ENST00000439235 CTAGE15A4D2H0 777 aa21.3■■□□□ 1
CHD3-204ENST00000439235 TRDMT1O14717 391 aaKnown RBP21.3■■□□□ 1
CHD3-204ENST00000439235 CLDN11O75508 207 aa21.3■■□□□ 1
CHD3-204ENST00000439235 CTAGE8P0CG41 777 aa21.3■■□□□ 1
CHD3-204ENST00000439235 MAPKAPK2P49137 400 aa21.3■■□□□ 1
CHD3-204ENST00000439235 SIX1Q15475 284 aaPredicted RBP21.3■■□□□ 1
CHD3-204ENST00000439235 LEXMQ3ZCV2 418 aa21.3■■□□□ 1
CHD3-204ENST00000439235 ALFQ53S48 1182 aa21.3■■□□□ 1
CHD3-204ENST00000439235 CTAGE6Q86UF2 777 aa21.3■■□□□ 1
CHD3-204ENST00000439235 NLRP14Q86W24 1093 aa21.3■■□□□ 1
CHD3-204ENST00000439235 CTAGE4Q8IX94 777 aa21.3■■□□□ 1
CHD3-204ENST00000439235 SPATA4Q8NEY3 305 aa21.3■■□□□ 1
CHD3-204ENST00000439235 DEPDC1BQ8WUY9 529 aa21.3■■□□□ 1
CHD3-204ENST00000439235 OSCP1Q8WVF1 389 aa21.3■■□□□ 1
CHD3-204ENST00000439235 ELSPBP1Q96BH3 223 aa21.3■■□□□ 1
CHD3-204ENST00000439235 HAUS1Q96CS2 278 aa21.3■■□□□ 1
CHD3-204ENST00000439235 TMA16Q96EY4 203 aaKnown RBP21.3■■□□□ 1
CHD3-204ENST00000439235 MYEOVQ96EZ4 313 aa21.3■■□□□ 1
CHD3-204ENST00000439235 CARD6Q9BX69 1037 aa21.3■■□□□ 1
CHD3-204ENST00000439235 ETNK2Q9NVF9 386 aa21.3■■□□□ 1
CHD3-204ENST00000439235 DUS2Q9NX74 493 aaKnown RBP21.3■■□□□ 1
CHD3-204ENST00000439235 RAD54BQ9Y620 910 aa21.3■■□□□ 1
CHD3-204ENST00000439235 WNT6Q9Y6F9 365 aa21.3■■□□□ 1
CHD3-204ENST00000439235 MFSD11O43934 449 aa21.29■■□□□ 1
CHD3-204ENST00000439235 ECI2O75521 394 aa21.29■■□□□ 1
CHD3-204ENST00000439235 IRAK1P51617 712 aa21.29■■□□□ 1
CHD3-204ENST00000439235 RPS24P62847 133 aaKnown RBP21.29■■□□□ 1
CHD3-204ENST00000439235 OTUD4Q01804 1114 aaKnown RBP21.29■■□□□ 1
CHD3-204ENST00000439235 PDGFRLQ15198 375 aa21.29■■□□□ 1
CHD3-204ENST00000439235 PUS10Q3MIT2 529 aaKnown RBP21.29■■□□□ 1
CHD3-204ENST00000439235 MPP7Q5T2T1 576 aa21.29■■□□□ 1
CHD3-204ENST00000439235 TANGO2Q6ICL3 276 aa21.29■■□□□ 1
CHD3-204ENST00000439235 C1orf228Q6PIY5 440 aa21.29■■□□□ 1
CHD3-204ENST00000439235 CIR1Q86X95 450 aaPredicted RBP21.29■■□□□ 1
CHD3-204ENST00000439235 CCDC117Q8IWD4 279 aaPredicted RBP21.29■■□□□ 1
CHD3-204ENST00000439235 YAF2Q8IY57 180 aa21.29■■□□□ 1
CHD3-204ENST00000439235 CFAP52Q8N1V2 620 aa21.29■■□□□ 1
CHD3-204ENST00000439235 PRELID2Q8N945 189 aa21.29■■□□□ 1
CHD3-204ENST00000439235 C12orf50Q8NA57 414 aaPredicted RBP21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms