RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 GPATCH2LQ9NWQ4 482 aa16.19■□□□□ 0.18
DHFR-201ENST00000439211 KCNK4Q9NYG8 393 aa16.19■□□□□ 0.18
DHFR-201ENST00000439211 WARS2Q9UGM6 360 aaKnown RBP16.19■□□□□ 0.18
DHFR-201ENST00000439211 ZNF541Q9H0D2 1346 aa16.19■□□□□ 0.18
DHFR-201ENST00000439211 A8MU76 341 aa16.19■□□□□ 0.18
DHFR-201ENST00000439211 ALOX15BO15296 676 aa16.19■□□□□ 0.18
DHFR-201ENST00000439211 BACE1P56817 501 aa16.19■□□□□ 0.18
DHFR-201ENST00000439211 BCAR1P56945 870 aa16.19■□□□□ 0.18
DHFR-201ENST00000439211 GNA12Q03113 381 aa16.19■□□□□ 0.18
DHFR-201ENST00000439211 TAP1Q03518 808 aa16.19■□□□□ 0.18
DHFR-201ENST00000439211 KLF1Q13351 362 aaPredicted RBP16.19■□□□□ 0.18
DHFR-201ENST00000439211 DENND1BQ6P3S1 775 aa16.19■□□□□ 0.18
DHFR-201ENST00000439211 POTEAQ6S8J7 498 aa16.19■□□□□ 0.18
DHFR-201ENST00000439211 JOSD2Q8TAC2 188 aa16.19■□□□□ 0.18
DHFR-201ENST00000439211 SENP6Q9GZR1 1112 aaPredicted RBP16.19■□□□□ 0.18
DHFR-201ENST00000439211 RNF38Q9H0F5 515 aa16.19■□□□□ 0.18
DHFR-201ENST00000439211 EP400Q96L91 3159 aa16.19■□□□□ 0.18
DHFR-201ENST00000439211 KLHL2O95198 593 aa16.18■□□□□ 0.18
DHFR-201ENST00000439211 ABHD2P08910 425 aa16.18■□□□□ 0.18
DHFR-201ENST00000439211 MZF1P28698 734 aaPredicted RBP16.18■□□□□ 0.18
DHFR-201ENST00000439211 STIP1P31948 543 aaKnown RBP16.18■□□□□ 0.18
DHFR-201ENST00000439211 GDF10P55107 478 aa16.18■□□□□ 0.18
DHFR-201ENST00000439211 MAPK11Q15759 364 aa16.18■□□□□ 0.18
DHFR-201ENST00000439211 UNC45BQ8IWX7 931 aa16.18■□□□□ 0.18
DHFR-201ENST00000439211 SIX6OS1Q8N1H7 587 aa16.18■□□□□ 0.18
DHFR-201ENST00000439211 GCOM2Q9BZD3 368 aaPredicted RBP16.18■□□□□ 0.18
DHFR-201ENST00000439211 ZC3H7BQ9UGR2 993 aaKnown RBP16.18■□□□□ 0.18
DHFR-201ENST00000439211 RAB26Q9ULW5 256 aa16.18■□□□□ 0.18
DHFR-201ENST00000439211 NUMBLQ9Y6R0 609 aa16.18■□□□□ 0.18
DHFR-201ENST00000439211 ZBBXA8MT70 800 aa16.18■□□□□ 0.18
DHFR-201ENST00000439211 AVILO75366 819 aa16.18■□□□□ 0.18
DHFR-201ENST00000439211 CD48P09326 243 aa16.18■□□□□ 0.18
DHFR-201ENST00000439211 FAAP100Q0VG06 881 aa16.18■□□□□ 0.18
DHFR-201ENST00000439211 BMPR2Q13873 1038 aa16.18■□□□□ 0.18
DHFR-201ENST00000439211 TBCCQ15814 346 aa16.18■□□□□ 0.18
DHFR-201ENST00000439211 NPNTQ6UXI9 565 aa16.18■□□□□ 0.18
DHFR-201ENST00000439211 MARVELD2Q8N4S9 558 aa16.18■□□□□ 0.18
DHFR-201ENST00000439211 CMTM5Q96DZ9 223 aa16.18■□□□□ 0.18
DHFR-201ENST00000439211 TRPV5Q9NQA5 729 aa16.18■□□□□ 0.18
DHFR-201ENST00000439211 AASDHPPTQ9NRN7 309 aa16.18■□□□□ 0.18
DHFR-201ENST00000439211 ASNSD1Q9NWL6 643 aa16.18■□□□□ 0.18
DHFR-201ENST00000439211 MAP3K20Q9NYL2 800 aaKnown RBP16.18■□□□□ 0.18
DHFR-201ENST00000439211 SEPT10Q9P0V9 454 aa16.18■□□□□ 0.18
DHFR-201ENST00000439211 POMPQ9Y244 141 aa16.18■□□□□ 0.18
DHFR-201ENST00000439211 CEPT1Q9Y6K0 416 aa16.18■□□□□ 0.18
DHFR-201ENST00000439211 KBTBD13C9JR72 458 aa16.18■□□□□ 0.18
DHFR-201ENST00000439211 KLRC2P26717 231 aa16.18■□□□□ 0.18
DHFR-201ENST00000439211 FNBP1LQ5T0N5 605 aa16.18■□□□□ 0.18
DHFR-201ENST00000439211 PLK2Q9NYY3 685 aa16.18■□□□□ 0.18
DHFR-201ENST00000439211 TJP2Q9UDY2 1190 aa16.18■□□□□ 0.18
DHFR-201ENST00000439211 AP3B1O00203 1094 aa16.17■□□□□ 0.18
DHFR-201ENST00000439211 STX3Q13277 289 aa16.17■□□□□ 0.18
DHFR-201ENST00000439211 LRP8Q14114 963 aa16.17■□□□□ 0.18
DHFR-201ENST00000439211 MROH9Q5TGP6 573 aa16.17■□□□□ 0.18
DHFR-201ENST00000439211 MICALL2Q8IY33 904 aa16.17■□□□□ 0.18
DHFR-201ENST00000439211 MECRQ9BV79 373 aa16.17■□□□□ 0.18
DHFR-201ENST00000439211 PDGFDQ9GZP0 370 aaPredicted RBP16.17■□□□□ 0.18
DHFR-201ENST00000439211 PORCNQ9H237 461 aa16.17■□□□□ 0.18
DHFR-201ENST00000439211 SEMA6AQ9H2E6 1030 aa16.17■□□□□ 0.18
DHFR-201ENST00000439211 PSMD13Q9UNM6 376 aa16.17■□□□□ 0.18
DHFR-201ENST00000439211 SERPINB1P30740 379 aa16.17■□□□□ 0.18
DHFR-201ENST00000439211 ATICP31939 592 aa16.17■□□□□ 0.18
DHFR-201ENST00000439211 MMRN1Q13201 1228 aa16.17■□□□□ 0.18
DHFR-201ENST00000439211 PEX6Q13608 980 aa16.17■□□□□ 0.18
DHFR-201ENST00000439211 TFDP2Q14188 446 aa16.17■□□□□ 0.18
DHFR-201ENST00000439211 KCNJ8Q15842 424 aa16.17■□□□□ 0.18
DHFR-201ENST00000439211 LDLRAP1Q5SW96 308 aa16.17■□□□□ 0.18
DHFR-201ENST00000439211 XRRA1Q6P2D8 792 aa16.17■□□□□ 0.18
DHFR-201ENST00000439211 GADL1Q6ZQY3 521 aa16.17■□□□□ 0.18
DHFR-201ENST00000439211 TAS1R3Q7RTX0 852 aa16.17■□□□□ 0.18
DHFR-201ENST00000439211 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.17■□□□□ 0.18
DHFR-201ENST00000439211 SEPT3Q9UH03 358 aa16.17■□□□□ 0.18
DHFR-201ENST00000439211 TCF7P36402 384 aaPredicted RBP16.17■□□□□ 0.18
DHFR-201ENST00000439211 OGDHQ02218 1023 aa16.17■□□□□ 0.18
DHFR-201ENST00000439211 BST1Q10588 318 aa16.17■□□□□ 0.18
DHFR-201ENST00000439211 ARL13BQ3SXY8 428 aa16.17■□□□□ 0.18
DHFR-201ENST00000439211 KANSL3Q9P2N6 904 aa16.17■□□□□ 0.18
DHFR-201ENST00000439211 BCL10O95999 233 aa16.16■□□□□ 0.18
DHFR-201ENST00000439211 FGFR1P11362 822 aa16.16■□□□□ 0.18
DHFR-201ENST00000439211 P4HA1P13674 534 aa16.16■□□□□ 0.18
DHFR-201ENST00000439211 ENO3P13929 434 aaPredicted RBP16.16■□□□□ 0.18
DHFR-201ENST00000439211 RNASEH2BQ5TBB1 312 aaKnown RBP16.16■□□□□ 0.18
DHFR-201ENST00000439211 ZCCHC23Q6ZST2 131 aa16.16■□□□□ 0.18
DHFR-201ENST00000439211 AGBL3Q8NEM8 1001 aa16.16■□□□□ 0.18
DHFR-201ENST00000439211 TRAPPC12Q8WVT3 735 aa16.16■□□□□ 0.18
DHFR-201ENST00000439211 TFAP2BQ92481 460 aa16.16■□□□□ 0.18
DHFR-201ENST00000439211 KCNN1Q92952 543 aa16.16■□□□□ 0.18
DHFR-201ENST00000439211 C12orf43Q96C57 262 aaKnown RBP16.16■□□□□ 0.18
DHFR-201ENST00000439211 KLC2Q9H0B6 622 aa16.16■□□□□ 0.18
DHFR-201ENST00000439211 HOXC10Q9NYD6 342 aa16.16■□□□□ 0.18
DHFR-201ENST00000439211 PIM2Q9P1W9 311 aa16.16■□□□□ 0.18
DHFR-201ENST00000439211 CDH22Q9UJ99 828 aa16.16■□□□□ 0.18
DHFR-201ENST00000439211 NHSQ6T4R5 1651 aa16.16■□□□□ 0.18
DHFR-201ENST00000439211 A0A1W2PPW3 197 aa16.16■□□□□ 0.18
DHFR-201ENST00000439211 E2F8A0AVK6 867 aa16.16■□□□□ 0.18
DHFR-201ENST00000439211 OGTO15294 1046 aa16.16■□□□□ 0.18
DHFR-201ENST00000439211 TSPAN9O75954 239 aa16.16■□□□□ 0.18
DHFR-201ENST00000439211 SORBS2O94875 1100 aaKnown RBP16.16■□□□□ 0.18
DHFR-201ENST00000439211 GJB1P08034 283 aa16.16■□□□□ 0.18
DHFR-201ENST00000439211 ACO1P21399 889 aaKnown RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms