RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 CCNA2P20248 432 aa15.31■□□□□ 0.04
TSC2-206ENST00000439117 RRM1P23921 792 aa15.31■□□□□ 0.04
TSC2-206ENST00000439117 NUP62P37198 522 aaPredicted RBP15.31■□□□□ 0.04
TSC2-206ENST00000439117 VAC14Q08AM6 782 aa15.31■□□□□ 0.04
TSC2-206ENST00000439117 ZNF846Q147U1 533 aa15.31■□□□□ 0.04
TSC2-206ENST00000439117 AMHR2Q16671 573 aa15.31■□□□□ 0.04
TSC2-206ENST00000439117 CYP51A1Q16850 503 aa15.31■□□□□ 0.04
TSC2-206ENST00000439117 ACTL9Q8TC94 416 aa15.31■□□□□ 0.04
TSC2-206ENST00000439117 KCTD10Q9H3F6 313 aa15.31■□□□□ 0.04
TSC2-206ENST00000439117 PCDHA3Q9Y5H8 950 aa15.31■□□□□ 0.04
TSC2-206ENST00000439117 FMN2Q9NZ56 1722 aa15.3■□□□□ 0.04
TSC2-206ENST00000439117 FRMPD4Q14CM0 1322 aa15.3■□□□□ 0.04
TSC2-206ENST00000439117 C2CD2LO14523 706 aa15.3■□□□□ 0.04
TSC2-206ENST00000439117 KATNA1O75449 491 aa15.3■□□□□ 0.04
TSC2-206ENST00000439117 MPP3Q13368 585 aa15.3■□□□□ 0.04
TSC2-206ENST00000439117 ZDHHC13Q8IUH4 622 aa15.3■□□□□ 0.04
TSC2-206ENST00000439117 YAF2Q8IY57 180 aa15.3■□□□□ 0.04
TSC2-206ENST00000439117 ZCCHC9Q8N567 271 aaKnown RBP15.3■□□□□ 0.04
TSC2-206ENST00000439117 RTL3Q8N8U3 475 aaKnown RBP15.3■□□□□ 0.04
TSC2-206ENST00000439117 UGT2B28Q9BY64 529 aa15.3■□□□□ 0.04
TSC2-206ENST00000439117 TRIM39Q9HCM9 518 aa15.3■□□□□ 0.04
TSC2-206ENST00000439117 ABI2Q9NYB9 513 aaPredicted RBP15.3■□□□□ 0.04
TSC2-206ENST00000439117 IRF6O14896 467 aa15.3■□□□□ 0.04
TSC2-206ENST00000439117 HOXA2O43364 376 aa15.3■□□□□ 0.04
TSC2-206ENST00000439117 SEC24AO95486 1093 aa15.3■□□□□ 0.04
TSC2-206ENST00000439117 AKR1A1P14550 325 aa15.3■□□□□ 0.04
TSC2-206ENST00000439117 CBX3Q13185 183 aa15.3■□□□□ 0.04
TSC2-206ENST00000439117 PERM1Q5SV97 790 aa15.3■□□□□ 0.04
TSC2-206ENST00000439117 STRA8Q7Z7C7 330 aa15.3■□□□□ 0.04
TSC2-206ENST00000439117 SLC22A9Q8IVM8 553 aa15.3■□□□□ 0.04
TSC2-206ENST00000439117 EFHBQ8N7U6 833 aa15.3■□□□□ 0.04
TSC2-206ENST00000439117 POC5Q8NA72 575 aa15.3■□□□□ 0.04
TSC2-206ENST00000439117 BTN2A2Q8WVV5 523 aa15.3■□□□□ 0.04
TSC2-206ENST00000439117 SEPHS2Q99611 448 aa15.3■□□□□ 0.04
TSC2-206ENST00000439117 MTG1Q9BT17 334 aaPredicted RBP15.3■□□□□ 0.04
TSC2-206ENST00000439117 ENOPH1Q9UHY7 261 aa15.3■□□□□ 0.04
TSC2-206ENST00000439117 STK25O00506 426 aa15.3■□□□□ 0.04
TSC2-206ENST00000439117 PRPF4O43172 522 aaKnown RBP eCLIP15.3■□□□□ 0.041e-6■■■■□ 25.9
TSC2-206ENST00000439117 ATG7O95352 703 aa15.3■□□□□ 0.04
TSC2-206ENST00000439117 UQCRBP14927 111 aa15.3■□□□□ 0.04
TSC2-206ENST00000439117 PRIM2P49643 509 aa15.3■□□□□ 0.04
TSC2-206ENST00000439117 TMEM26Q6ZUK4 368 aa15.3■□□□□ 0.04
TSC2-206ENST00000439117 ACOT1Q86TX2 421 aa15.3■□□□□ 0.04
TSC2-206ENST00000439117 TRIM74Q86UV6 250 aa15.3■□□□□ 0.04
TSC2-206ENST00000439117 TRIM73Q86UV7 250 aa15.3■□□□□ 0.04
TSC2-206ENST00000439117 VSIG10LQ86VR7 867 aa15.3■□□□□ 0.04
TSC2-206ENST00000439117 FAM45AQ8TCE6 357 aa15.3■□□□□ 0.04
TSC2-206ENST00000439117 PABPC5Q96DU9 382 aaKnown RBP15.3■□□□□ 0.04
TSC2-206ENST00000439117 MTMR9Q96QG7 549 aa15.3■□□□□ 0.04
TSC2-206ENST00000439117 OSBPL11Q9BXB4 747 aa15.3■□□□□ 0.04
TSC2-206ENST00000439117 POLR1BQ9H9Y6 1135 aa15.3■□□□□ 0.04
TSC2-206ENST00000439117 BLOC1S4Q9NUP1 217 aa15.3■□□□□ 0.04
TSC2-206ENST00000439117 PTGES3LE9PB15 166 aa15.3■□□□□ 0.04
TSC2-206ENST00000439117 THP07101 528 aa15.3■□□□□ 0.04
TSC2-206ENST00000439117 ELK3P41970 407 aa15.3■□□□□ 0.04
TSC2-206ENST00000439117 TAF5Q15542 800 aa15.3■□□□□ 0.04
TSC2-206ENST00000439117 C8orf59Q8N0T1 100 aaPredicted RBP15.3■□□□□ 0.04
TSC2-206ENST00000439117 PIWIL2Q8TC59 973 aaKnown RBP15.3■□□□□ 0.04
TSC2-206ENST00000439117 ZCWPW1Q9H0M4 648 aa15.3■□□□□ 0.04
TSC2-206ENST00000439117 CIDEBQ9UHD4 219 aa15.3■□□□□ 0.04
TSC2-206ENST00000439117 NDUFAF1Q9Y375 327 aa15.3■□□□□ 0.04
TSC2-206ENST00000439117 F8W810 466 aa15.29■□□□□ 0.04
TSC2-206ENST00000439117 CSDE1O75534 798 aaKnown RBP15.29■□□□□ 0.04
TSC2-206ENST00000439117 BAIAP3O94812 1187 aa15.29■□□□□ 0.04
TSC2-206ENST00000439117 GP5P40197 560 aa15.29■□□□□ 0.04
TSC2-206ENST00000439117 FASTKQ14296 549 aaKnown RBP15.29■□□□□ 0.04
TSC2-206ENST00000439117 LPIN1Q14693 890 aa15.29■□□□□ 0.04
TSC2-206ENST00000439117 ABRAXAS1Q6UWZ7 409 aa15.29■□□□□ 0.04
TSC2-206ENST00000439117 OTOAQ7RTW8 1153 aa15.29■□□□□ 0.04
TSC2-206ENST00000439117 GALNT15Q8N3T1 639 aa15.29■□□□□ 0.04
TSC2-206ENST00000439117 RNF148Q8N7C7 305 aa15.29■□□□□ 0.04
TSC2-206ENST00000439117 C17orf50Q8WW18 174 aa15.29■□□□□ 0.04
TSC2-206ENST00000439117 PRRG3Q9BZD7 231 aa15.29■□□□□ 0.04
TSC2-206ENST00000439117 WDR12Q9GZL7 423 aaKnown RBP15.29■□□□□ 0.04
TSC2-206ENST00000439117 HDHD2Q9H0R4 259 aa15.29■□□□□ 0.04
TSC2-206ENST00000439117 SERHL2Q9H4I8 314 aa15.29■□□□□ 0.04
TSC2-206ENST00000439117 CATSPERBQ9H7T0 1116 aa15.29■□□□□ 0.04
TSC2-206ENST00000439117 SERHLQ9NQF3 203 aa15.29■□□□□ 0.04
TSC2-206ENST00000439117 AAASQ9NRG9 546 aa15.29■□□□□ 0.04
TSC2-206ENST00000439117 CHKBQ9Y259 395 aa15.29■□□□□ 0.04
TSC2-206ENST00000439117 CYB561D2O14569 222 aa15.29■□□□□ 0.04
TSC2-206ENST00000439117 DDHD2O94830 711 aa15.29■□□□□ 0.04
TSC2-206ENST00000439117 MMP13P45452 471 aa15.29■□□□□ 0.04
TSC2-206ENST00000439117 ARPC4P59998 168 aa15.29■□□□□ 0.04
TSC2-206ENST00000439117 DLG4P78352 724 aa15.29■□□□□ 0.04
TSC2-206ENST00000439117 NRF1Q16656 503 aa15.29■□□□□ 0.04
TSC2-206ENST00000439117 SH3KBP1Q96B97 665 aa15.29■□□□□ 0.04
TSC2-206ENST00000439117 GANQ9H2C0 597 aa15.29■□□□□ 0.04
TSC2-206ENST00000439117 CYP3A43Q9HB55 503 aa15.29■□□□□ 0.04
TSC2-206ENST00000439117 DPPA5A6NC42 116 aa15.29■□□□□ 0.04
TSC2-206ENST00000439117 EFCAB10A6NFE3 127 aa15.29■□□□□ 0.04
TSC2-206ENST00000439117 ACO1P21399 889 aaKnown RBP15.29■□□□□ 0.04
TSC2-206ENST00000439117 SP100P23497 879 aaPredicted RBP15.29■□□□□ 0.04
TSC2-206ENST00000439117 ADSSP30520 456 aa15.29■□□□□ 0.04
TSC2-206ENST00000439117 RAB15P59190 212 aa15.29■□□□□ 0.04
TSC2-206ENST00000439117 MYL6P60660 151 aa15.29■□□□□ 0.04
TSC2-206ENST00000439117 COX10Q12887 443 aa15.29■□□□□ 0.04
TSC2-206ENST00000439117 MRNIPQ6NTE8 343 aa15.29■□□□□ 0.04
TSC2-206ENST00000439117 ETNPPLQ8TBG4 499 aa15.29■□□□□ 0.04
TSC2-206ENST00000439117 ACSF2Q96CM8 615 aaPredicted RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms