RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 RIPK3Q9Y572 518 aa13.72□□□□□ -0.21
ACTN1-204ENST00000438964 TRIP11Q15643 1979 aa13.72□□□□□ -0.21
ACTN1-204ENST00000438964 SYNJ2BP-COX16A0A087WUM0 186 aa13.72□□□□□ -0.21
ACTN1-204ENST00000438964 ASS1P00966 412 aaKnown RBP13.72□□□□□ -0.21
ACTN1-204ENST00000438964 CPA3P15088 417 aa13.72□□□□□ -0.21
ACTN1-204ENST00000438964 AVPR1AP37288 418 aa13.72□□□□□ -0.21
ACTN1-204ENST00000438964 EMC2Q15006 297 aa13.72□□□□□ -0.21
ACTN1-204ENST00000438964 LSM12Q3MHD2 195 aaKnown RBP13.72□□□□□ -0.21
ACTN1-204ENST00000438964 PACS1Q6VY07 963 aa13.72□□□□□ -0.21
ACTN1-204ENST00000438964 RPS27LQ71UM5 84 aaKnown RBP13.72□□□□□ -0.21
ACTN1-204ENST00000438964 AHI1Q8N157 1196 aa13.72□□□□□ -0.21
ACTN1-204ENST00000438964 FAM47BQ8NA70 645 aa13.72□□□□□ -0.21
ACTN1-204ENST00000438964 KYQ8NBH2 561 aa13.72□□□□□ -0.21
ACTN1-204ENST00000438964 PCDH19Q8TAB3 1148 aa13.72□□□□□ -0.21
ACTN1-204ENST00000438964 AGAP2Q99490 1192 aa13.72□□□□□ -0.21
ACTN1-204ENST00000438964 SLC39A3Q9BRY0 314 aa13.72□□□□□ -0.21
ACTN1-204ENST00000438964 SDCBP2Q9H190 292 aa13.72□□□□□ -0.21
ACTN1-204ENST00000438964 NOL11Q9H8H0 719 aaKnown RBP13.72□□□□□ -0.21
ACTN1-204ENST00000438964 RMI1Q9H9A7 625 aa13.72□□□□□ -0.21
ACTN1-204ENST00000438964 COX16Q9P0S2 106 aa13.72□□□□□ -0.21
ACTN1-204ENST00000438964 PAK5Q9P286 719 aa13.72□□□□□ -0.21
ACTN1-204ENST00000438964 STK39Q9UEW8 545 aa13.72□□□□□ -0.21
ACTN1-204ENST00000438964 SAC3D1A6NKF1 404 aa13.71□□□□□ -0.21
ACTN1-204ENST00000438964 FAM159BA6NKW6 160 aa13.71□□□□□ -0.21
ACTN1-204ENST00000438964 AP1G1O43747 822 aa13.71□□□□□ -0.21
ACTN1-204ENST00000438964 PRPSAP2O60256 369 aa13.71□□□□□ -0.21
ACTN1-204ENST00000438964 PEX10O60683 326 aa13.71□□□□□ -0.21
ACTN1-204ENST00000438964 CAP2P40123 477 aa13.71□□□□□ -0.21
ACTN1-204ENST00000438964 HSD17B4P51659 736 aa13.71□□□□□ -0.21
ACTN1-204ENST00000438964 ART3Q13508 389 aa13.71□□□□□ -0.21
ACTN1-204ENST00000438964 ITGA7Q13683 1181 aa13.71□□□□□ -0.21
ACTN1-204ENST00000438964 STILQ15468 1287 aa13.71□□□□□ -0.21
ACTN1-204ENST00000438964 TMEM132AQ24JP5 1023 aa13.71□□□□□ -0.21
ACTN1-204ENST00000438964 ARCQ7LC44 396 aa13.71□□□□□ -0.21
ACTN1-204ENST00000438964 SP8Q8IXZ3 490 aa13.71□□□□□ -0.21
ACTN1-204ENST00000438964 TMEM192Q8IY95 271 aa13.71□□□□□ -0.21
ACTN1-204ENST00000438964 ZNF786Q8N393 782 aa13.71□□□□□ -0.21
ACTN1-204ENST00000438964 LGMNQ99538 433 aa13.71□□□□□ -0.21
ACTN1-204ENST00000438964 IDI2Q9BXS1 227 aa13.71□□□□□ -0.21
ACTN1-204ENST00000438964 SOX17Q9H6I2 414 aaPredicted RBP13.71□□□□□ -0.21
ACTN1-204ENST00000438964 RSAD1Q9HA92 442 aa13.71□□□□□ -0.21
ACTN1-204ENST00000438964 WDR41Q9HAD4 459 aa13.71□□□□□ -0.21
ACTN1-204ENST00000438964 TIMMDC1Q9NPL8 285 aa13.71□□□□□ -0.21
ACTN1-204ENST00000438964 RNF19AQ9NV58 838 aa13.71□□□□□ -0.21
ACTN1-204ENST00000438964 C6orf203Q9P0P8 240 aaPredicted RBP13.71□□□□□ -0.21
ACTN1-204ENST00000438964 MRPL42Q9Y6G3 142 aaKnown RBP13.71□□□□□ -0.21
ACTN1-204ENST00000438964 TK2O00142 265 aa13.71□□□□□ -0.22
ACTN1-204ENST00000438964 BIRC5O15392 142 aa13.71□□□□□ -0.22
ACTN1-204ENST00000438964 PTPN7P35236 360 aa13.71□□□□□ -0.22
ACTN1-204ENST00000438964 YAP1P46937 504 aaKnown RBP13.71□□□□□ -0.22
ACTN1-204ENST00000438964 SNRPFP62306 86 aaKnown RBP13.71□□□□□ -0.22
ACTN1-204ENST00000438964 BAATQ14032 418 aaPredicted RBP13.71□□□□□ -0.22
ACTN1-204ENST00000438964 ZNF423Q2M1K9 1284 aa13.71□□□□□ -0.22
ACTN1-204ENST00000438964 MGAT5BQ3V5L5 792 aa13.71□□□□□ -0.22
ACTN1-204ENST00000438964 LDLRAP1Q5SW96 308 aa13.71□□□□□ -0.22
ACTN1-204ENST00000438964 GRAMD4Q6IC98 578 aa13.71□□□□□ -0.22
ACTN1-204ENST00000438964 C12orf29Q8N999 325 aa13.71□□□□□ -0.22
ACTN1-204ENST00000438964 CMASQ8NFW8 434 aaPredicted RBP13.71□□□□□ -0.22
ACTN1-204ENST00000438964 PDCD6IPQ8WUM4 868 aaKnown RBP13.71□□□□□ -0.22
ACTN1-204ENST00000438964 SGF29Q96ES7 293 aa13.71□□□□□ -0.22
ACTN1-204ENST00000438964 PDCD2LQ9BRP1 358 aa13.71□□□□□ -0.22
ACTN1-204ENST00000438964 NTPCRQ9BSD7 190 aaKnown RBP13.71□□□□□ -0.22
ACTN1-204ENST00000438964 NIF3L1Q9GZT8 377 aa13.71□□□□□ -0.22
ACTN1-204ENST00000438964 TXNDC16Q9P2K2 825 aa13.71□□□□□ -0.22
ACTN1-204ENST00000438964 TUBGCP4Q9UGJ1 667 aa13.71□□□□□ -0.22
ACTN1-204ENST00000438964 IL4RP24394 825 aa13.7□□□□□ -0.22
ACTN1-204ENST00000438964 XIAPP98170 497 aa13.7□□□□□ -0.22
ACTN1-204ENST00000438964 DCAF6Q58WW2 860 aa13.7□□□□□ -0.22
ACTN1-204ENST00000438964 GK5Q6ZS86 529 aa13.7□□□□□ -0.22
ACTN1-204ENST00000438964 NCCRP1Q6ZVX7 275 aaPredicted RBP13.7□□□□□ -0.22
ACTN1-204ENST00000438964 CERKQ8TCT0 537 aa13.7□□□□□ -0.22
ACTN1-204ENST00000438964 DCPSQ96C86 337 aaKnown RBP13.7□□□□□ -0.22
ACTN1-204ENST00000438964 RNF157Q96PX1 679 aa13.7□□□□□ -0.22
ACTN1-204ENST00000438964 APBA2Q99767 749 aa13.7□□□□□ -0.22
ACTN1-204ENST00000438964 APOL2Q9BQE5 337 aa13.7□□□□□ -0.22
ACTN1-204ENST00000438964 LPIN3Q9BQK8 851 aa13.7□□□□□ -0.22
ACTN1-204ENST00000438964 TRIM8Q9BZR9 551 aa13.7□□□□□ -0.22
ACTN1-204ENST00000438964 ZNF696Q9H7X3 374 aa13.7□□□□□ -0.22
ACTN1-204ENST00000438964 CIDEBQ9UHD4 219 aa13.7□□□□□ -0.22
ACTN1-204ENST00000438964 RAB26Q9ULW5 256 aa13.7□□□□□ -0.22
ACTN1-204ENST00000438964 A0A1W2PPW3 197 aa13.7□□□□□ -0.22
ACTN1-204ENST00000438964 SPAG6O75602 509 aa13.7□□□□□ -0.22
ACTN1-204ENST00000438964 TIPRLO75663 272 aa13.7□□□□□ -0.22
ACTN1-204ENST00000438964 CSE1LP55060 971 aaKnown RBP13.7□□□□□ -0.22
ACTN1-204ENST00000438964 SH3BGRP55822 239 aaPredicted RBP13.7□□□□□ -0.22
ACTN1-204ENST00000438964 SULT2A1Q06520 285 aa13.7□□□□□ -0.22
ACTN1-204ENST00000438964 CYP4V2Q6ZWL3 525 aaPredicted RBP13.7□□□□□ -0.22
ACTN1-204ENST00000438964 B3GNT5Q9BYG0 378 aa13.7□□□□□ -0.22
ACTN1-204ENST00000438964 ANKEF1Q9NU02 776 aa13.7□□□□□ -0.22
ACTN1-204ENST00000438964 C9JVG2 144 aa13.69□□□□□ -0.22
ACTN1-204ENST00000438964 APOL1O14791 398 aa13.69□□□□□ -0.22
ACTN1-204ENST00000438964 NR4A1P22736 598 aa13.69□□□□□ -0.22
ACTN1-204ENST00000438964 TGFB2P61812 414 aa13.69□□□□□ -0.22
ACTN1-204ENST00000438964 SFSWAPQ12872 951 aaKnown RBP13.69□□□□□ -0.22
ACTN1-204ENST00000438964 BNIP3Q12983 259 aa13.69□□□□□ -0.22
ACTN1-204ENST00000438964 DACT2Q5SW24 774 aa13.69□□□□□ -0.22
ACTN1-204ENST00000438964 TP53INP2Q8IXH6 220 aa13.69□□□□□ -0.22
ACTN1-204ENST00000438964 NIPA2Q8N8Q9 360 aa13.69□□□□□ -0.22
ACTN1-204ENST00000438964 TMPRSS4Q9NRS4 437 aa13.69□□□□□ -0.22
ACTN1-204ENST00000438964 TRNAU1APQ9NX07 287 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms