RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 EPHX1P07099 455 aa25.55■■□□□ 1.68
RAPGEF1-206ENST00000438647 GSCP56915 257 aaPredicted RBP25.55■■□□□ 1.68
RAPGEF1-206ENST00000438647 LMNB2Q03252 620 aa25.55■■□□□ 1.68
RAPGEF1-206ENST00000438647 AUHQ13825 339 aaKnown RBP25.55■■□□□ 1.68
RAPGEF1-206ENST00000438647 MAP7D1Q3KQU3 841 aa25.55■■□□□ 1.68
RAPGEF1-206ENST00000438647 FUT11Q495W5 492 aa25.55■■□□□ 1.68
RAPGEF1-206ENST00000438647 PHF13Q86YI8 300 aaPredicted RBP25.55■■□□□ 1.68
RAPGEF1-206ENST00000438647 CYB5D2Q8WUJ1 264 aa25.55■■□□□ 1.68
RAPGEF1-206ENST00000438647 RLN3Q8WXF3 142 aa25.55■■□□□ 1.68
RAPGEF1-206ENST00000438647 LMLNQ96KR4 655 aa25.55■■□□□ 1.68
RAPGEF1-206ENST00000438647 MRGPRX1Q96LB2 322 aa25.55■■□□□ 1.68
RAPGEF1-206ENST00000438647 RPRD1AQ96P16 312 aaPredicted RBP25.55■■□□□ 1.68
RAPGEF1-206ENST00000438647 EDEM3Q9BZQ6 932 aa25.55■■□□□ 1.68
RAPGEF1-206ENST00000438647 TKTL2Q9H0I9 626 aa25.55■■□□□ 1.68
RAPGEF1-206ENST00000438647 SEMA4GQ9NTN9 838 aa25.55■■□□□ 1.68
RAPGEF1-206ENST00000438647 ARHGEF38Q9NXL2 777 aa25.55■■□□□ 1.68
RAPGEF1-206ENST00000438647 HS3ST4Q9Y661 456 aa25.55■■□□□ 1.68
RAPGEF1-206ENST00000438647 TGM1P22735 817 aa25.54■■□□□ 1.68
RAPGEF1-206ENST00000438647 RDXP35241 583 aaKnown RBP25.54■■□□□ 1.68
RAPGEF1-206ENST00000438647 OXCT1P55809 520 aa25.54■■□□□ 1.68
RAPGEF1-206ENST00000438647 FANCCQ00597 558 aa25.54■■□□□ 1.68
RAPGEF1-206ENST00000438647 SLC12A1Q13621 1099 aa25.54■■□□□ 1.68
RAPGEF1-206ENST00000438647 CSRP2Q16527 193 aa25.54■■□□□ 1.68
RAPGEF1-206ENST00000438647 SPDYCQ5MJ68 293 aa25.54■■□□□ 1.68
RAPGEF1-206ENST00000438647 PPP1R2P3Q6NXS1 205 aa25.54■■□□□ 1.68
RAPGEF1-206ENST00000438647 FBXL22Q6P050 247 aa25.54■■□□□ 1.68
RAPGEF1-206ENST00000438647 TTC17Q96AE7 1141 aa25.54■■□□□ 1.68
RAPGEF1-206ENST00000438647 ADAM33Q9BZ11 813 aa25.54■■□□□ 1.68
RAPGEF1-206ENST00000438647 ARRDC1-AS1Q9H2J1 176 aa25.54■■□□□ 1.68
RAPGEF1-206ENST00000438647 PARD6AQ9NPB6 346 aa25.54■■□□□ 1.68
RAPGEF1-206ENST00000438647 LRRC53A6NM62 1247 aa25.53■■□□□ 1.68
RAPGEF1-206ENST00000438647 TFE3P19532 575 aaPredicted RBP25.53■■□□□ 1.68
RAPGEF1-206ENST00000438647 BCKDHBP21953 392 aa25.53■■□□□ 1.68
RAPGEF1-206ENST00000438647 PRKCHP24723 683 aa25.53■■□□□ 1.68
RAPGEF1-206ENST00000438647 ST8SIA6P61647 398 aa25.53■■□□□ 1.68
RAPGEF1-206ENST00000438647 C1QBPQ07021 282 aaKnown RBP25.53■■□□□ 1.68
RAPGEF1-206ENST00000438647 FSCBQ5H9T9 825 aa25.53■■□□□ 1.68
RAPGEF1-206ENST00000438647 SLC36A4Q6YBV0 504 aa25.53■■□□□ 1.68
RAPGEF1-206ENST00000438647 LPCAT2Q7L5N7 544 aa25.53■■□□□ 1.68
RAPGEF1-206ENST00000438647 IRF2BP2Q7Z5L9 587 aa25.53■■□□□ 1.68
RAPGEF1-206ENST00000438647 CCAR2Q8N163 923 aaKnown RBP25.53■■□□□ 1.68
RAPGEF1-206ENST00000438647 ERLEC1Q96DZ1 483 aa25.53■■□□□ 1.68
RAPGEF1-206ENST00000438647 CFAP57Q96MR6 1250 aa25.53■■□□□ 1.68
RAPGEF1-206ENST00000438647 PPP1R9BQ96SB3 815 aa25.53■■□□□ 1.68
RAPGEF1-206ENST00000438647 TMEM245Q9H330 911 aa25.53■■□□□ 1.68
RAPGEF1-206ENST00000438647 PRDM16Q9HAZ2 1276 aa25.53■■□□□ 1.68
RAPGEF1-206ENST00000438647 VANGL2Q9ULK5 521 aa25.53■■□□□ 1.68
RAPGEF1-206ENST00000438647 PRR5-ARHGAP8B1AHC4 643 aa25.52■■□□□ 1.68
RAPGEF1-206ENST00000438647 ADCY5O95622 1261 aa25.52■■□□□ 1.68
RAPGEF1-206ENST00000438647 SDC4P31431 198 aa25.52■■□□□ 1.68
RAPGEF1-206ENST00000438647 CSKP41240 450 aa25.52■■□□□ 1.68
RAPGEF1-206ENST00000438647 UBASH3AP57075 661 aa25.52■■□□□ 1.68
RAPGEF1-206ENST00000438647 ARHGAP8P85298 464 aa25.52■■□□□ 1.68
RAPGEF1-206ENST00000438647 PTP4A2Q12974 167 aa25.52■■□□□ 1.68
RAPGEF1-206ENST00000438647 ASIC2Q16515 512 aa25.52■■□□□ 1.68
RAPGEF1-206ENST00000438647 PTPRNQ16849 979 aa25.52■■□□□ 1.68
RAPGEF1-206ENST00000438647 FIGNQ5HY92 759 aa25.52■■□□□ 1.68
RAPGEF1-206ENST00000438647 PITRM1Q5JRX3 1037 aa25.52■■□□□ 1.68
RAPGEF1-206ENST00000438647 KIAA1324Q6UXG2 1013 aaKnown RBP25.52■■□□□ 1.68
RAPGEF1-206ENST00000438647 METTL3Q86U44 580 aaKnown RBP25.52■■□□□ 1.68
RAPGEF1-206ENST00000438647 EMC1Q8N766 993 aa25.52■■□□□ 1.68
RAPGEF1-206ENST00000438647 C3orf20Q8ND61 904 aa25.52■■□□□ 1.68
RAPGEF1-206ENST00000438647 NUP58Q9BVL2 599 aa25.52■■□□□ 1.68
RAPGEF1-206ENST00000438647 SIK2Q9H0K1 926 aa25.52■■□□□ 1.68
RAPGEF1-206ENST00000438647 FBRSQ9HAH7 460 aa25.52■■□□□ 1.68
RAPGEF1-206ENST00000438647 KRT3P12035 628 aa25.51■■□□□ 1.67
RAPGEF1-206ENST00000438647 PDGFRAP16234 1089 aa25.51■■□□□ 1.67
RAPGEF1-206ENST00000438647 TNFAIP3P21580 790 aa25.51■■□□□ 1.67
RAPGEF1-206ENST00000438647 MPLP40238 635 aa25.51■■□□□ 1.67
RAPGEF1-206ENST00000438647 CREB5Q02930 508 aa25.51■■□□□ 1.67
RAPGEF1-206ENST00000438647 SFMBT2Q5VUG0 894 aa25.51■■□□□ 1.67
RAPGEF1-206ENST00000438647 TRNP1Q6NT89 227 aa25.51■■□□□ 1.67
RAPGEF1-206ENST00000438647 MON1BQ7L1V2 547 aa25.51■■□□□ 1.67
RAPGEF1-206ENST00000438647 BNIPLQ7Z465 357 aa25.51■■□□□ 1.67
RAPGEF1-206ENST00000438647 TMPRSS6Q8IU80 811 aa25.51■■□□□ 1.67
RAPGEF1-206ENST00000438647 KDM1BQ8NB78 822 aa25.51■■□□□ 1.67
RAPGEF1-206ENST00000438647 RXFP2Q8WXD0 754 aa25.51■■□□□ 1.67
RAPGEF1-206ENST00000438647 C1orf74Q96LT6 269 aa25.51■■□□□ 1.67
RAPGEF1-206ENST00000438647 SELENOOQ9BVL4 669 aa25.51■■□□□ 1.67
RAPGEF1-206ENST00000438647 TTYH3Q9C0H2 523 aa25.51■■□□□ 1.67
RAPGEF1-206ENST00000438647 MKRN2Q9H000 416 aaKnown RBP25.51■■□□□ 1.67
RAPGEF1-206ENST00000438647 AIPL1Q9NZN9 384 aa25.51■■□□□ 1.67
RAPGEF1-206ENST00000438647 SUN2Q9UH99 717 aa25.51■■□□□ 1.67
RAPGEF1-206ENST00000438647 INTS6Q9UL03 887 aaKnown RBP25.51■■□□□ 1.67
RAPGEF1-206ENST00000438647 PLXND1Q9Y4D7 1925 aa25.51■■□□□ 1.67
RAPGEF1-206ENST00000438647 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP25.5■■□□□ 1.67
RAPGEF1-206ENST00000438647 C2CD4BA6NLJ0 364 aa25.5■■□□□ 1.67
RAPGEF1-206ENST00000438647 AP5Z1O43299 807 aa25.5■■□□□ 1.67
RAPGEF1-206ENST00000438647 CLDN11O75508 207 aa25.5■■□□□ 1.67
RAPGEF1-206ENST00000438647 HLA-EP13747 358 aa25.5■■□□□ 1.67
RAPGEF1-206ENST00000438647 SDHBP21912 280 aa25.5■■□□□ 1.67
RAPGEF1-206ENST00000438647 ATP11AP98196 1134 aa25.5■■□□□ 1.67
RAPGEF1-206ENST00000438647 ZNF177Q13360 481 aaPredicted RBP25.5■■□□□ 1.67
RAPGEF1-206ENST00000438647 CAMK2GQ13555 558 aaPredicted RBP25.5■■□□□ 1.67
RAPGEF1-206ENST00000438647 PLEKHG6Q3KR16 790 aa25.5■■□□□ 1.67
RAPGEF1-206ENST00000438647 C5orf22Q49AR2 442 aa25.5■■□□□ 1.67
RAPGEF1-206ENST00000438647 LRRC31Q6UY01 552 aa25.5■■□□□ 1.67
RAPGEF1-206ENST00000438647 PRR23CQ6ZRP0 262 aa25.5■■□□□ 1.67
RAPGEF1-206ENST00000438647 PHLDB2Q86SQ0 1253 aa25.5■■□□□ 1.67
RAPGEF1-206ENST00000438647 CIR1Q86X95 450 aaPredicted RBP25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms