RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 LATS1O95835 1130 aa4.22□□□□□ -1.73
LSM1P1-201ENST00000438629 PRKAA2P54646 552 aa4.22□□□□□ -1.73
LSM1P1-201ENST00000438629 SLC12A2P55011 1212 aa4.22□□□□□ -1.73
LSM1P1-201ENST00000438629 PROK1P58294 105 aa4.22□□□□□ -1.73
LSM1P1-201ENST00000438629 GHRHRQ02643 423 aa4.22□□□□□ -1.73
LSM1P1-201ENST00000438629 ANKRD1Q15327 319 aa4.22□□□□□ -1.73
LSM1P1-201ENST00000438629 MEX3CQ5U5Q3 659 aaKnown RBP4.22□□□□□ -1.73
LSM1P1-201ENST00000438629 DHRS13Q6UX07 377 aa4.22□□□□□ -1.73
LSM1P1-201ENST00000438629 CYP26C1Q6V0L0 522 aa4.22□□□□□ -1.73
LSM1P1-201ENST00000438629 RBM44Q6ZP01 1051 aaKnown RBP4.22□□□□□ -1.73
LSM1P1-201ENST00000438629 HERC6Q8IVU3 1022 aa4.22□□□□□ -1.73
LSM1P1-201ENST00000438629 MAP4K1Q92918 833 aa4.22□□□□□ -1.73
LSM1P1-201ENST00000438629 KTI12Q96EK9 354 aaPredicted RBP4.22□□□□□ -1.73
LSM1P1-201ENST00000438629 FCRL5Q96RD9 977 aa4.22□□□□□ -1.73
LSM1P1-201ENST00000438629 FEM1BQ9UK73 627 aa4.22□□□□□ -1.73
LSM1P1-201ENST00000438629 GTF2A1LQ9UNN4 478 aa4.22□□□□□ -1.73
LSM1P1-201ENST00000438629 RRP7AQ9Y3A4 280 aaKnown RBP4.22□□□□□ -1.73
LSM1P1-201ENST00000438629 LMTK3Q96Q04 1460 aa4.22□□□□□ -1.73
LSM1P1-201ENST00000438629 C16orf96A6NNT2 1141 aa4.21□□□□□ -1.74
LSM1P1-201ENST00000438629 B9A039 149 aa4.21□□□□□ -1.74
LSM1P1-201ENST00000438629 CCNT1O60563 726 aaKnown RBP4.21□□□□□ -1.74
LSM1P1-201ENST00000438629 TSPAN3O60637 253 aa4.21□□□□□ -1.74
LSM1P1-201ENST00000438629 RBMXL2O75526 392 aaKnown RBP4.21□□□□□ -1.74
LSM1P1-201ENST00000438629 CNTN5O94779 1100 aa4.21□□□□□ -1.74
LSM1P1-201ENST00000438629 KAT7O95251 611 aa4.21□□□□□ -1.74
LSM1P1-201ENST00000438629 PLAUP00749 431 aa4.21□□□□□ -1.74
LSM1P1-201ENST00000438629 ALDOCP09972 364 aaKnown RBP4.21□□□□□ -1.74
LSM1P1-201ENST00000438629 RFPL3SP0C7P2 107 aa4.21□□□□□ -1.74
LSM1P1-201ENST00000438629 CHN1P15882 459 aa4.21□□□□□ -1.74
LSM1P1-201ENST00000438629 HOXB9P17482 250 aaPredicted RBP4.21□□□□□ -1.74
LSM1P1-201ENST00000438629 TFEBP19484 476 aa4.21□□□□□ -1.74
LSM1P1-201ENST00000438629 RXRAP19793 462 aa4.21□□□□□ -1.74
LSM1P1-201ENST00000438629 RPS6KB1P23443 525 aa4.21□□□□□ -1.74
LSM1P1-201ENST00000438629 IDUAP35475 653 aa4.21□□□□□ -1.74
LSM1P1-201ENST00000438629 FAM3BP58499 235 aaPredicted RBP4.21□□□□□ -1.74
LSM1P1-201ENST00000438629 NANOS3P60323 173 aaKnown RBP4.21□□□□□ -1.74
LSM1P1-201ENST00000438629 MTA1Q13330 715 aa4.21□□□□□ -1.74
LSM1P1-201ENST00000438629 ALKBH1Q13686 389 aaKnown RBP4.21□□□□□ -1.74
LSM1P1-201ENST00000438629 AWAT1Q58HT5 328 aa4.21□□□□□ -1.74
LSM1P1-201ENST00000438629 EARS2Q5JPH6 523 aaKnown RBP4.21□□□□□ -1.74
LSM1P1-201ENST00000438629 ZNF782Q6ZMW2 699 aaPredicted RBP4.21□□□□□ -1.74
LSM1P1-201ENST00000438629 RFX6Q8HWS3 928 aa4.21□□□□□ -1.74
LSM1P1-201ENST00000438629 ANKRD44Q8N8A2 993 aa4.21□□□□□ -1.74
LSM1P1-201ENST00000438629 DPF1Q92782 380 aa4.21□□□□□ -1.74
LSM1P1-201ENST00000438629 ARRDC3Q96B67 414 aa4.21□□□□□ -1.74
LSM1P1-201ENST00000438629 UBXN10Q96LJ8 280 aa4.21□□□□□ -1.74
LSM1P1-201ENST00000438629 COG8Q96MW5 612 aa4.21□□□□□ -1.74
LSM1P1-201ENST00000438629 PPP1R10Q96QC0 940 aaKnown RBP4.21□□□□□ -1.74
LSM1P1-201ENST00000438629 RIC8AQ9NPQ8 531 aa4.21□□□□□ -1.74
LSM1P1-201ENST00000438629 SUFUQ9UMX1 484 aa4.21□□□□□ -1.74
LSM1P1-201ENST00000438629 CYP2D7A0A087X1C5 515 aa4.2□□□□□ -1.74
LSM1P1-201ENST00000438629 MCIDASD6RGH6 385 aa4.2□□□□□ -1.74
LSM1P1-201ENST00000438629 EIF3FO00303 357 aaPredicted RBP4.2□□□□□ -1.74
LSM1P1-201ENST00000438629 HEXIM1O94992 359 aaKnown RBP4.2□□□□□ -1.74
LSM1P1-201ENST00000438629 HLA-DQA2P01906 255 aa4.2□□□□□ -1.74
LSM1P1-201ENST00000438629 PNPLA4P41247 253 aa4.2□□□□□ -1.74
LSM1P1-201ENST00000438629 MAPK9P45984 424 aa4.2□□□□□ -1.74
LSM1P1-201ENST00000438629 ADPRHP54922 357 aa4.2□□□□□ -1.74
LSM1P1-201ENST00000438629 CDK18Q07002 472 aa4.2□□□□□ -1.74
LSM1P1-201ENST00000438629 GOLGA8FQ08AF8 430 aa4.2□□□□□ -1.74
LSM1P1-201ENST00000438629 PDCLQ13371 301 aa4.2□□□□□ -1.74
LSM1P1-201ENST00000438629 STIM1Q13586 685 aa4.2□□□□□ -1.74
LSM1P1-201ENST00000438629 C10orf76Q5T2E6 689 aa4.2□□□□□ -1.74
LSM1P1-201ENST00000438629 LIPMQ5VYY2 423 aa4.2□□□□□ -1.74
LSM1P1-201ENST00000438629 RHPN2Q8IUC4 686 aa4.2□□□□□ -1.74
LSM1P1-201ENST00000438629 ADGRF3Q8IZF5 1079 aa4.2□□□□□ -1.74
LSM1P1-201ENST00000438629 CEP70Q8NHQ1 597 aa4.2□□□□□ -1.74
LSM1P1-201ENST00000438629 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.2□□□□□ -1.74
LSM1P1-201ENST00000438629 CLEC4CQ8WTT0 213 aa4.2□□□□□ -1.74
LSM1P1-201ENST00000438629 USP13Q92995 863 aaPredicted RBP4.2□□□□□ -1.74
LSM1P1-201ENST00000438629 CUL5Q93034 780 aa4.2□□□□□ -1.74
LSM1P1-201ENST00000438629 SH3KBP1Q96B97 665 aa4.2□□□□□ -1.74
LSM1P1-201ENST00000438629 TBATAQ96M53 351 aa4.2□□□□□ -1.74
LSM1P1-201ENST00000438629 GATA5Q9BWX5 397 aaPredicted RBP4.2□□□□□ -1.74
LSM1P1-201ENST00000438629 TM2D2Q9BX73 214 aa4.2□□□□□ -1.74
LSM1P1-201ENST00000438629 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.2□□□□□ -1.74
LSM1P1-201ENST00000438629 PLEKHA2Q9HB19 425 aa4.2□□□□□ -1.74
LSM1P1-201ENST00000438629 NRIP3Q9NQ35 241 aa4.2□□□□□ -1.74
LSM1P1-201ENST00000438629 MTMR4Q9NYA4 1195 aa4.2□□□□□ -1.74
LSM1P1-201ENST00000438629 TNFSF13BQ9Y275 285 aa4.2□□□□□ -1.74
LSM1P1-201ENST00000438629 ZNF335Q9H4Z2 1342 aaPredicted RBP4.2□□□□□ -1.74
LSM1P1-201ENST00000438629 DPPA5A6NC42 116 aa4.19□□□□□ -1.74
LSM1P1-201ENST00000438629 TMEM247A6NEH6 219 aa4.19□□□□□ -1.74
LSM1P1-201ENST00000438629 GRM8O00222 908 aa4.19□□□□□ -1.74
LSM1P1-201ENST00000438629 RRHO14718 337 aa4.19□□□□□ -1.74
LSM1P1-201ENST00000438629 LCKP06239 509 aa4.19□□□□□ -1.74
LSM1P1-201ENST00000438629 CNPP09543 421 aaKnown RBP4.19□□□□□ -1.74
LSM1P1-201ENST00000438629 STAT1P42224 750 aa4.19□□□□□ -1.74
LSM1P1-201ENST00000438629 SOX2P48431 317 aa4.19□□□□□ -1.74
LSM1P1-201ENST00000438629 RPS6KA3P51812 740 aa4.19□□□□□ -1.74
LSM1P1-201ENST00000438629 RPS13P62277 151 aaKnown RBP4.19□□□□□ -1.74
LSM1P1-201ENST00000438629 SHC2P98077 582 aa4.19□□□□□ -1.74
LSM1P1-201ENST00000438629 SRSF4Q08170 494 aaKnown RBP4.19□□□□□ -1.74
LSM1P1-201ENST00000438629 SLC12A1Q13621 1099 aa4.19□□□□□ -1.74
LSM1P1-201ENST00000438629 THOC5Q13769 683 aaKnown RBP4.19□□□□□ -1.74
LSM1P1-201ENST00000438629 SLC9C1Q4G0N8 1177 aa4.19□□□□□ -1.74
LSM1P1-201ENST00000438629 CEP78Q5JTW2 689 aa4.19□□□□□ -1.74
LSM1P1-201ENST00000438629 DENND1BQ6P3S1 775 aa4.19□□□□□ -1.74
LSM1P1-201ENST00000438629 ZNF474Q6S9Z5 364 aaPredicted RBP4.19□□□□□ -1.74
LSM1P1-201ENST00000438629 TFAP2DQ7Z6R9 452 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms