RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 ANXA1P04083 346 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 CYP1A2P05177 515 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 GJB1P08034 283 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 TSPY4P0CV99 314 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 TSPY10P0CW01 314 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 GAAP10253 952 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 KCNA5P22460 613 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 GABRB3P28472 473 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 EPHA8P29322 1005 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 GCH1P30793 250 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 GRK5P34947 590 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 GARSP41250 739 aaKnown RBP3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 HDAC4P56524 1084 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 JAM2P57087 298 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 HERVK_113P62684 666 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 ARHGAP8P85298 464 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 ZBTB17Q13105 803 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 NOGQ13253 232 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 CAMK2DQ13557 499 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 TOB2Q14106 344 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 MXD4Q14582 209 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 TRADDQ15628 312 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 CRY1Q16526 586 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 TYSND1Q2T9J0 566 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 PRICKLE4Q2TBC4 344 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 FIGNQ5HY92 759 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 STRIP1Q5VSL9 837 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 KANK2Q63ZY3 851 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 ADALQ6DHV7 355 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 OTUD7BQ6GQQ9 843 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 ZCCHC12Q6PEW1 402 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 KCNV1Q6PIU1 500 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 ATF7IPQ6VMQ6 1270 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 RAB11FIP2Q7L804 512 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 PLPPR4Q7Z2D5 763 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 CCDC117Q8IWD4 279 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 FAM217AQ8IXS0 508 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 ZZZ3Q8IYH5 903 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 HDDC3Q8N4P3 179 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 MB21D1Q8N884 522 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 SUN5Q8TC36 379 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 NOC3LQ8WTT2 800 aaKnown RBP3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 C17orf50Q8WW18 174 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 SLC5A11Q8WWX8 675 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 NCSTNQ92542 709 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 FAM162AQ96A26 154 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 TUBGCP3Q96CW5 907 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 NMD3Q96D46 503 aaKnown RBP3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 SIPA1Q96FS4 1042 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 MRGPRX1Q96LB2 322 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 CEP295NLQ96MC4 621 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 TCEANC2Q96MN5 208 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 PRAM1Q96QH2 718 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 PRPF18Q99633 342 aaKnown RBP3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 FTOQ9C0B1 505 aaKnown RBP eCLIP3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 PDCL3Q9H2J4 239 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 TAF1DQ9H5J8 278 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 SERHLQ9NQF3 203 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 GLRX2Q9NS18 164 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 HOMER3Q9NSC5 361 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 AATFQ9NY61 560 aaKnown RBP eCLIP3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 PSD3Q9NYI0 1048 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 TAB2Q9NYJ8 693 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 RGL1Q9NZL6 768 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 SEPT10Q9P0V9 454 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 BTBD7Q9P203 1132 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 SUCLA2Q9P2R7 463 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 LPAR3Q9UBY5 353 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 DPP7Q9UHL4 492 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 CPA4Q9UI42 421 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 PACSIN3Q9UKS6 424 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 TMPRSS11EQ9UL52 423 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 GRID1Q9ULK0 1009 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 AURKCQ9UQB9 309 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 KLHL20Q9Y2M5 609 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 MRPL11Q9Y3B7 192 aaKnown RBP3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 PCDHB1Q9Y5F3 818 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 CLDN16Q9Y5I7 305 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 RBM8AQ9Y5S9 174 aaKnown RBP3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 LYVE1Q9Y5Y7 322 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 ATP8B3O60423 1300 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 MYPNQ86TC9 1320 aa3.83□□□□□ -1.8
HMGB1P12-201ENST00000438594 KDRP35968 1356 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 RNF123Q5XPI4 1314 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 A0A1W2PQ09 198 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 ZAR1LA6NP61 321 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 H3BUI4 141 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 PSMD14O00487 310 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 VWA5AO00534 786 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 POLR3GO15318 223 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 HNRNPRO43390 633 aaKnown RBP3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 CA12O43570 354 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 C22orf31O95567 290 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 GGPS1O95749 300 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 MPIG6BO95866 241 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 ABHD16AO95870 558 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 C4BPAP04003 597 aaKnown RBP3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 AMY2AP04746 511 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 TPOP07202 933 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 ZNF37AP17032 561 aaPredicted RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms