RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 ISCA1Q9BUE6 129 aa11.42□□□□□ -0.58
SCN4A-201ENST00000435607 ABHD16BQ9H3Z7 469 aa11.42□□□□□ -0.58
SCN4A-201ENST00000435607 CYP4F12Q9HCS2 524 aa11.42□□□□□ -0.58
SCN4A-201ENST00000435607 ZNF624Q9P2J8 865 aaPredicted RBP11.42□□□□□ -0.58
SCN4A-201ENST00000435607 SNCAIPQ9Y6H5 919 aa11.42□□□□□ -0.58
SCN4A-201ENST00000435607 CACNB4O00305 520 aaPredicted RBP11.42□□□□□ -0.58
SCN4A-201ENST00000435607 CXCL11O14625 94 aa11.42□□□□□ -0.58
SCN4A-201ENST00000435607 EPN2O95208 641 aa11.42□□□□□ -0.58
SCN4A-201ENST00000435607 JCHAINP01591 159 aa11.42□□□□□ -0.58
SCN4A-201ENST00000435607 RPL21P46778 160 aaKnown RBP11.42□□□□□ -0.58
SCN4A-201ENST00000435607 FBXO39Q8N4B4 442 aa11.42□□□□□ -0.58
SCN4A-201ENST00000435607 SETD9Q8NE22 299 aa11.42□□□□□ -0.58
SCN4A-201ENST00000435607 SUN3Q8TAQ9 357 aa11.42□□□□□ -0.58
SCN4A-201ENST00000435607 UGT2B28Q9BY64 529 aa11.42□□□□□ -0.58
SCN4A-201ENST00000435607 A1CFQ9NQ94 594 aaKnown RBP11.42□□□□□ -0.58
SCN4A-201ENST00000435607 GAKO14976 1311 aa11.42□□□□□ -0.58
SCN4A-201ENST00000435607 LOC100653049A0A140TA62 436 aa11.42□□□□□ -0.58
SCN4A-201ENST00000435607 ADCY6O43306 1168 aa11.42□□□□□ -0.58
SCN4A-201ENST00000435607 TSC22D2O75157 780 aa11.42□□□□□ -0.58
SCN4A-201ENST00000435607 HOXB8P17481 243 aaPredicted RBP11.42□□□□□ -0.58
SCN4A-201ENST00000435607 INAVAQ3KP66 663 aa11.42□□□□□ -0.58
SCN4A-201ENST00000435607 PTAR1Q7Z6K3 402 aaPredicted RBP11.42□□□□□ -0.58
SCN4A-201ENST00000435607 WDR49Q8IV35 697 aa11.42□□□□□ -0.58
SCN4A-201ENST00000435607 LEMD2Q8NC56 503 aa11.42□□□□□ -0.58
SCN4A-201ENST00000435607 ACTRT2Q8TDY3 377 aa11.42□□□□□ -0.58
SCN4A-201ENST00000435607 FTHL17Q9BXU8 183 aa11.42□□□□□ -0.58
SCN4A-201ENST00000435607 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.42□□□□□ -0.58
SCN4A-201ENST00000435607 FAM20BO75063 409 aa11.42□□□□□ -0.58
SCN4A-201ENST00000435607 TPP2P29144 1249 aaPredicted RBP11.42□□□□□ -0.58
SCN4A-201ENST00000435607 CLCN3P51790 818 aa11.42□□□□□ -0.58
SCN4A-201ENST00000435607 COLEC12Q5KU26 742 aa11.42□□□□□ -0.58
SCN4A-201ENST00000435607 GSPT2Q8IYD1 628 aaKnown RBP11.42□□□□□ -0.58
SCN4A-201ENST00000435607 METTL21AQ8WXB1 218 aa11.42□□□□□ -0.58
SCN4A-201ENST00000435607 TMEM176AQ96HP8 235 aa11.42□□□□□ -0.58
SCN4A-201ENST00000435607 TAAR1Q96RJ0 339 aa11.42□□□□□ -0.58
SCN4A-201ENST00000435607 SMPD4Q9NXE4 827 aa11.42□□□□□ -0.58
SCN4A-201ENST00000435607 SEC22BO75396 215 aa11.42□□□□□ -0.58
SCN4A-201ENST00000435607 PRG2P13727 222 aa11.42□□□□□ -0.58
SCN4A-201ENST00000435607 CBWD6Q4V339 395 aa11.42□□□□□ -0.58
SCN4A-201ENST00000435607 BNC2Q6ZN30 1099 aaPredicted RBP11.42□□□□□ -0.58
SCN4A-201ENST00000435607 MILR1Q7Z6M3 343 aa11.42□□□□□ -0.58
SCN4A-201ENST00000435607 RIT1Q92963 219 aa11.42□□□□□ -0.58
SCN4A-201ENST00000435607 ROGDIQ9GZN7 287 aa11.42□□□□□ -0.58
SCN4A-201ENST00000435607 ZDHHC6Q9H6R6 413 aa11.42□□□□□ -0.58
SCN4A-201ENST00000435607 TRPV2Q9Y5S1 764 aa11.42□□□□□ -0.58
SCN4A-201ENST00000435607 ABCA8O94911 1581 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 LINC00854A0A1B0GVQ3 168 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 DGKAP23743 735 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 UGT1A5P35504 534 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 CHKAP35790 457 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 GRIK4Q16099 956 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 PKN1Q16512 942 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 KLC4Q9NSK0 619 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 VGLL3A8MV65 326 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 INPP4BO15327 924 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 GYS1P13807 737 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 CD151P48509 253 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 NR2C2P49116 596 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 IL5RAQ01344 420 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 SMCO1Q147U7 214 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 MEA1Q16626 185 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 CACUL1Q86Y37 369 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 ZKSCAN4Q969J2 545 aaPredicted RBP11.41□□□□□ -0.58
SCN4A-201ENST00000435607 FAM126AQ9BYI3 521 aaPredicted RBP11.41□□□□□ -0.58
SCN4A-201ENST00000435607 PRDM8Q9NQV8 689 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 MAP3K4Q9Y6R4 1608 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 DNTTP04053 509 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 CAP2P40123 477 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 MDH1P40925 334 aaKnown RBP11.41□□□□□ -0.58
SCN4A-201ENST00000435607 MFSD10Q14728 455 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 ARID5BQ14865 1188 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 MZT2AQ6P582 158 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 CDADC1Q9BWV3 514 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 TRHDEQ9UKU6 1024 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 MKL2Q9ULH7 1088 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 CCDC154A6NI56 674 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 RGL2O15211 777 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 MED26O95402 600 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 ADH1CP00326 375 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 CYP1A1P04798 512 aaPredicted RBP11.41□□□□□ -0.58
SCN4A-201ENST00000435607 ALPPL2P10696 532 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 ZC2HC1CQ53FD0 456 aaPredicted RBP11.41□□□□□ -0.58
SCN4A-201ENST00000435607 ZNF410Q86VK4 478 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 LGI2Q8N0V4 545 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 FNDC5Q8NAU1 212 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 HAVCR1Q96D42 359 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 ERP27Q96DN0 273 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 ADGRG1Q9Y653 693 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 ATP9AO75110 1047 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 CYP11B1P15538 503 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 ATP5C1P36542 298 aaKnown RBP11.41□□□□□ -0.58
SCN4A-201ENST00000435607 SMIM11AP58511 58 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 ABRQ12979 859 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 SLC15A2Q16348 729 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 OSMRQ99650 979 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 OPTCQ9UBM4 332 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 TNPO3Q9Y5L0 923 aaKnown RBP11.41□□□□□ -0.58
SCN4A-201ENST00000435607 MYPNQ86TC9 1320 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 EFCAB10A6NFE3 127 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 TUBP50607 506 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms