RNA–Protein interactions for RNA: ENST00000435213.6

GARNL3-205, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2 BASIC

Gene GARNL3, Length 3,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-205ENST00000435213 USP1O94782 785 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 SEMA3DO95025 777 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 NPPAP01160 153 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 CD48P09326 243 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 BTDP43251 543 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 NAMPTP43490 491 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 OR3A3P47888 321 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 FMO5P49326 533 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 DUSP7Q16829 419 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 SFT2D3Q587I9 215 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 ZNF618Q5T7W0 954 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 RHBDF2Q6PJF5 856 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 MOXD1Q6UVY6 613 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 BEND4Q6ZU67 534 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 SLC13A5Q86YT5 568 aaPredicted RBP7.51□□□□□ -1.21
GARNL3-205ENST00000435213 CCDC116Q8IYX3 515 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 CHPFQ8IZ52 775 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 DEPDC4Q8N2C3 294 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 LARGE2Q8N3Y3 721 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 Q8N9G6 341 aaPredicted RBP7.51□□□□□ -1.21
GARNL3-205ENST00000435213 ZNF565Q8N9K5 539 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 ZNF398Q8TD17 642 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 TGFBRAP1Q8WUH2 860 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 B3GALT6Q96L58 329 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 MBOAT7Q96N66 472 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 REEP2Q9BRK0 252 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 GPR88Q9GZN0 384 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 TRIT1Q9H3H1 467 aaKnown RBP7.51□□□□□ -1.21
GARNL3-205ENST00000435213 HIPK3Q9H422 1215 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 LRRC19Q9H756 370 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 LIN28AQ9H9Z2 209 aaKnown RBP7.51□□□□□ -1.21
GARNL3-205ENST00000435213 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.51□□□□□ -1.21
GARNL3-205ENST00000435213 FAM105AQ9NUU6 356 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 TFCP2L1Q9NZI6 479 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 SENP1Q9P0U3 644 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 PRKAG2Q9UGJ0 569 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 UBE4BO95155 1302 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 IRS2Q9Y4H2 1338 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 ANKRD63C9JTQ0 380 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 MAGEB2O15479 319 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 MAFO75444 373 aaPredicted RBP7.51□□□□□ -1.21
GARNL3-205ENST00000435213 MED24O75448 989 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 TTC4O95801 387 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 SNHG28P0DPA3 235 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 GAP43P17677 238 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 ITIH2P19823 946 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 FDFT1P37268 417 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 CDC20Q12834 499 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 UBE2SQ16763 222 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 USP37Q86T82 979 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 RNF135Q8IUD6 432 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 CLIP4Q8N3C7 705 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 CCDC24Q8N4L8 307 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 DHX38Q92620 1227 aaKnown RBP7.51□□□□□ -1.21
GARNL3-205ENST00000435213 KRT35Q92764 455 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 CELF1Q92879 486 aaKnown RBP7.51□□□□□ -1.21
GARNL3-205ENST00000435213 HDAC11Q96DB2 347 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 MTBPQ96DY7 904 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 TOE1Q96GM8 510 aaKnown RBP7.51□□□□□ -1.21
GARNL3-205ENST00000435213 TSGA13Q96PP4 275 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 SNX18Q96RF0 628 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 IL37Q9NZH6 218 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 APPL1Q9UKG1 709 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 RAB26Q9ULW5 256 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 ATF5Q9Y2D1 282 aaPredicted RBP7.51□□□□□ -1.21
GARNL3-205ENST00000435213 HEMK1Q9Y5R4 338 aaPredicted RBP7.51□□□□□ -1.21
GARNL3-205ENST00000435213 SNX5Q9Y5X3 404 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 CPQQ9Y646 472 aa7.51□□□□□ -1.21
GARNL3-205ENST00000435213 GREB1LQ9C091 1923 aaPredicted RBP7.51□□□□□ -1.21
GARNL3-205ENST00000435213 CYP3A7-CYP3A51PA0A087WV96 503 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 C17orf113A0A1B0GUU1 675 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 SH3D21A4FU49 640 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 BTN3A1O00481 513 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 TAC1P20366 129 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 CYP3A7P24462 503 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 CASP4P49662 377 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 HK2P52789 917 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 SLC12A2P55011 1212 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 AQP4P55087 323 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 ACTR3P61158 418 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 LRRC74AQ0VAA2 488 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 SIM2Q14190 667 aaPredicted RBP7.5□□□□□ -1.21
GARNL3-205ENST00000435213 CTTNQ14247 550 aaKnown RBP7.5□□□□□ -1.21
GARNL3-205ENST00000435213 SIX1Q15475 284 aaPredicted RBP7.5□□□□□ -1.21
GARNL3-205ENST00000435213 TBRG1Q3YBR2 411 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 ATAD3BQ5T9A4 648 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 FAM180BQ6P0A1 224 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 RGS9BPQ6ZS82 235 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 GSTA5Q7RTV2 222 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 CAMK1DQ8IU85 385 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 PM20D2Q8IYS1 436 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 ATAD1Q8NBU5 361 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 SPATA18Q8TC71 538 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 PSPC1Q8WXF1 523 aaKnown RBP7.5□□□□□ -1.21
GARNL3-205ENST00000435213 CD101Q93033 1021 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 RANBP9Q96S59 729 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 AGPAT1Q99943 283 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 C1QTNF7Q9BXJ2 289 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 INTS2Q9H0H0 1204 aaKnown RBP7.5□□□□□ -1.21
GARNL3-205ENST00000435213 GHITMQ9H3K2 345 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms