RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 INTS6LQ5JSJ4 861 aaKnown RBP12.29□□□□□ -0.44
CTCFL-209ENST00000433949 SPOUT1Q5T280 376 aaKnown RBP12.29□□□□□ -0.44
CTCFL-209ENST00000433949 FAXCQ5TGI0 409 aa12.29□□□□□ -0.44
CTCFL-209ENST00000433949 RNF43Q68DV7 783 aa12.29□□□□□ -0.44
CTCFL-209ENST00000433949 LVRNQ6Q4G3 990 aa12.29□□□□□ -0.44
CTCFL-209ENST00000433949 BEND5Q7L4P6 421 aa12.29□□□□□ -0.44
CTCFL-209ENST00000433949 THEM5Q8N1Q8 247 aa12.29□□□□□ -0.44
CTCFL-209ENST00000433949 TOP1MTQ969P6 601 aa12.29□□□□□ -0.44
CTCFL-209ENST00000433949 MTBPQ96DY7 904 aa12.29□□□□□ -0.44
CTCFL-209ENST00000433949 SIGLEC10Q96LC7 697 aa12.29□□□□□ -0.44
CTCFL-209ENST00000433949 LBHD1Q9BQE6 289 aaPredicted RBP12.29□□□□□ -0.44
CTCFL-209ENST00000433949 NAT9Q9BTE0 207 aa12.29□□□□□ -0.44
CTCFL-209ENST00000433949 VPS11Q9H270 941 aa12.29□□□□□ -0.44
CTCFL-209ENST00000433949 HAUS2Q9NVX0 235 aa12.29□□□□□ -0.44
CTCFL-209ENST00000433949 PRKAG3Q9UGI9 489 aa12.29□□□□□ -0.44
CTCFL-209ENST00000433949 FBXW11Q9UKB1 542 aa12.29□□□□□ -0.44
CTCFL-209ENST00000433949 TTLL3Q9Y4R7 772 aa12.29□□□□□ -0.44
CTCFL-209ENST00000433949 SHROOM3Q8TF72 1996 aa12.29□□□□□ -0.44
CTCFL-209ENST00000433949 ALPK3Q96L96 1907 aa12.28□□□□□ -0.44
CTCFL-209ENST00000433949 SYNJ2BP-COX16A0A087WUM0 186 aa12.28□□□□□ -0.44
CTCFL-209ENST00000433949 HHLA1C9JL84 531 aa12.28□□□□□ -0.44
CTCFL-209ENST00000433949 DCLK1O15075 740 aa12.28□□□□□ -0.44
CTCFL-209ENST00000433949 INPPL1O15357 1258 aa12.28□□□□□ -0.44
CTCFL-209ENST00000433949 DNAJC8O75937 253 aaPredicted RBP12.28□□□□□ -0.44
CTCFL-209ENST00000433949 KRT38O76015 456 aa12.28□□□□□ -0.44
CTCFL-209ENST00000433949 SNRPAP09012 282 aaKnown RBP12.28□□□□□ -0.44
CTCFL-209ENST00000433949 FOXN2P32314 431 aa12.28□□□□□ -0.44
CTCFL-209ENST00000433949 PITX1P78337 314 aaPredicted RBP12.28□□□□□ -0.44
CTCFL-209ENST00000433949 SEMA3BQ13214 749 aa12.28□□□□□ -0.44
CTCFL-209ENST00000433949 MTM1Q13496 603 aa12.28□□□□□ -0.44
CTCFL-209ENST00000433949 PARP6Q2NL67 630 aa12.28□□□□□ -0.44
CTCFL-209ENST00000433949 PM20D1Q6GTS8 502 aa12.28□□□□□ -0.44
CTCFL-209ENST00000433949 HFE2Q6ZVN8 426 aa12.28□□□□□ -0.44
CTCFL-209ENST00000433949 COLGALT2Q8IYK4 626 aa12.28□□□□□ -0.44
CTCFL-209ENST00000433949 CFAP36Q96G28 342 aa12.28□□□□□ -0.44
CTCFL-209ENST00000433949 KCNK16Q96T55 309 aa12.28□□□□□ -0.44
CTCFL-209ENST00000433949 MAGEB5Q9BZ81 275 aa12.28□□□□□ -0.44
CTCFL-209ENST00000433949 WDR6Q9NNW5 1121 aaKnown RBP12.28□□□□□ -0.44
CTCFL-209ENST00000433949 DMAP1Q9NPF5 467 aaPredicted RBP12.28□□□□□ -0.44
CTCFL-209ENST00000433949 TMEM51Q9NW97 253 aa12.28□□□□□ -0.44
CTCFL-209ENST00000433949 COX16Q9P0S2 106 aa12.28□□□□□ -0.44
CTCFL-209ENST00000433949 KANSL3Q9P2N6 904 aa12.28□□□□□ -0.44
CTCFL-209ENST00000433949 SLC12A4Q9UP95 1085 aa12.28□□□□□ -0.44
CTCFL-209ENST00000433949 USP17L7P0C7H9 530 aa12.27□□□□□ -0.44
CTCFL-209ENST00000433949 ALADP13716 330 aa12.27□□□□□ -0.44
CTCFL-209ENST00000433949 VAV1P15498 845 aa12.27□□□□□ -0.44
CTCFL-209ENST00000433949 TYMPP19971 482 aa12.27□□□□□ -0.44
CTCFL-209ENST00000433949 SERPINB6P35237 376 aa12.27□□□□□ -0.44
CTCFL-209ENST00000433949 SERPINB9P50453 376 aa12.27□□□□□ -0.44
CTCFL-209ENST00000433949 TPI1P60174 286 aa12.27□□□□□ -0.44
CTCFL-209ENST00000433949 SLC18A2Q05940 514 aa12.27□□□□□ -0.44
CTCFL-209ENST00000433949 AP1B1Q10567 949 aa12.27□□□□□ -0.44
CTCFL-209ENST00000433949 TMEM240Q5SV17 173 aa12.27□□□□□ -0.44
CTCFL-209ENST00000433949 SYCP2LQ5T4T6 812 aa12.27□□□□□ -0.44
CTCFL-209ENST00000433949 LRRC8BQ6P9F7 803 aa12.27□□□□□ -0.44
CTCFL-209ENST00000433949 ZNF534Q76KX8 674 aa12.27□□□□□ -0.44
CTCFL-209ENST00000433949 CTAGE3PQ8IX95 158 aa12.27□□□□□ -0.44
CTCFL-209ENST00000433949 COLGALT1Q8NBJ5 622 aa12.27□□□□□ -0.44
CTCFL-209ENST00000433949 MYLPFQ96A32 169 aa12.27□□□□□ -0.44
CTCFL-209ENST00000433949 P2RY11Q96G91 374 aa12.27□□□□□ -0.44
CTCFL-209ENST00000433949 APOPT1Q96IL0 206 aa12.27□□□□□ -0.44
CTCFL-209ENST00000433949 B3GALT6Q96L58 329 aa12.27□□□□□ -0.44
CTCFL-209ENST00000433949 YME1L1Q96TA2 773 aa12.27□□□□□ -0.44
CTCFL-209ENST00000433949 LGMNQ99538 433 aa12.27□□□□□ -0.44
CTCFL-209ENST00000433949 ZBED2Q9BTP6 218 aa12.27□□□□□ -0.44
CTCFL-209ENST00000433949 COLEC11Q9BWP8 271 aa12.27□□□□□ -0.44
CTCFL-209ENST00000433949 DDIT4Q9NX09 232 aa12.27□□□□□ -0.44
CTCFL-209ENST00000433949 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.27□□□□□ -0.444e-9■□□□□ 10.7
CTCFL-209ENST00000433949 IGSF9Q9P2J2 1179 aa12.27□□□□□ -0.44
CTCFL-209ENST00000433949 PHTF1Q9UMS5 762 aa12.27□□□□□ -0.44
CTCFL-209ENST00000433949 PCDHA11Q9Y5I1 949 aa12.27□□□□□ -0.44
CTCFL-209ENST00000433949 RNF103O00237 685 aa12.27□□□□□ -0.45
CTCFL-209ENST00000433949 LPXNO60711 386 aa12.27□□□□□ -0.45
CTCFL-209ENST00000433949 EDF1O60869 148 aaKnown RBP12.27□□□□□ -0.45
CTCFL-209ENST00000433949 TADA2AO75478 443 aa12.27□□□□□ -0.45
CTCFL-209ENST00000433949 C1QAP02745 245 aa12.27□□□□□ -0.45
CTCFL-209ENST00000433949 MX2P20592 715 aa12.27□□□□□ -0.45
CTCFL-209ENST00000433949 CNTFP26441 200 aa12.27□□□□□ -0.45
CTCFL-209ENST00000433949 TSPY1Q01534 308 aa12.27□□□□□ -0.45
CTCFL-209ENST00000433949 CCDC15Q0P6D6 951 aa12.27□□□□□ -0.45
CTCFL-209ENST00000433949 SLC1A5Q15758 541 aa12.27□□□□□ -0.45
CTCFL-209ENST00000433949 DCLRE1AQ6PJP8 1040 aa12.27□□□□□ -0.45
CTCFL-209ENST00000433949 TMEM173Q86WV6 379 aaPredicted RBP12.27□□□□□ -0.45
CTCFL-209ENST00000433949 AGGF1Q8N302 714 aaeCLIP12.27□□□□□ -0.45
CTCFL-209ENST00000433949 CCNYQ8ND76 341 aa12.27□□□□□ -0.45
CTCFL-209ENST00000433949 TCP10LQ8TDR4 215 aa12.27□□□□□ -0.45
CTCFL-209ENST00000433949 SUSD3Q96L08 255 aa12.27□□□□□ -0.45
CTCFL-209ENST00000433949 EPAS1Q99814 870 aa12.27□□□□□ -0.45
CTCFL-209ENST00000433949 PRDM12Q9H4Q4 367 aa12.27□□□□□ -0.45
CTCFL-209ENST00000433949 WDCPQ9H6R7 721 aa12.27□□□□□ -0.45
CTCFL-209ENST00000433949 RXFP1Q9HBX9 757 aa12.27□□□□□ -0.45
CTCFL-209ENST00000433949 MAD1L1Q9Y6D9 718 aa12.27□□□□□ -0.45
CTCFL-209ENST00000433949 SDR42E2A6NKP2 422 aa12.26□□□□□ -0.45
CTCFL-209ENST00000433949 HOXA2O43364 376 aa12.26□□□□□ -0.45
CTCFL-209ENST00000433949 ALDH2P05091 517 aa12.26□□□□□ -0.45
CTCFL-209ENST00000433949 ALDH3A1P30838 453 aa12.26□□□□□ -0.45
CTCFL-209ENST00000433949 SLC11A1P49279 550 aa12.26□□□□□ -0.45
CTCFL-209ENST00000433949 CXCR3P49682 368 aa12.26□□□□□ -0.45
CTCFL-209ENST00000433949 DSC1Q08554 894 aa12.26□□□□□ -0.45
CTCFL-209ENST00000433949 DNAJC3Q13217 504 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms