RNA–Protein interactions for RNA: ENST00000432645.6

HDAC9-212, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-212ENST00000432645 COLEC11Q9BWP8 271 aa8.57□□□□□ -1.04
HDAC9-212ENST00000432645 TKTL2Q9H0I9 626 aa8.57□□□□□ -1.04
HDAC9-212ENST00000432645 C12orf65Q9H3J6 166 aaKnown RBP8.57□□□□□ -1.04
HDAC9-212ENST00000432645 WDCPQ9H6R7 721 aa8.57□□□□□ -1.04
HDAC9-212ENST00000432645 FGFR1OP2Q9NVK5 253 aa8.57□□□□□ -1.04
HDAC9-212ENST00000432645 PSMC3IPQ9P2W1 217 aaPredicted RBP8.57□□□□□ -1.04
HDAC9-212ENST00000432645 TEX264Q9Y6I9 313 aa8.57□□□□□ -1.04
HDAC9-212ENST00000432645 M0QZQ0 153 aa8.57□□□□□ -1.04
HDAC9-212ENST00000432645 FAM155BO75949 473 aa8.57□□□□□ -1.04
HDAC9-212ENST00000432645 CABYRO75952 493 aa8.57□□□□□ -1.04
HDAC9-212ENST00000432645 SRGAP2BP0DMP2 458 aa8.57□□□□□ -1.04
HDAC9-212ENST00000432645 ATP2A2P16615 1042 aaKnown RBP8.57□□□□□ -1.04
HDAC9-212ENST00000432645 ERCC2P18074 760 aa8.57□□□□□ -1.04
HDAC9-212ENST00000432645 RPA3P35244 121 aaPredicted RBP8.57□□□□□ -1.04
HDAC9-212ENST00000432645 MSH2P43246 934 aa8.57□□□□□ -1.04
HDAC9-212ENST00000432645 PAPOLAP51003 745 aaKnown RBP8.57□□□□□ -1.04
HDAC9-212ENST00000432645 SLC39A12Q504Y0 691 aa8.57□□□□□ -1.04
HDAC9-212ENST00000432645 ANKRD20A2Q5SQ80 823 aa8.57□□□□□ -1.04
HDAC9-212ENST00000432645 ANKRD20A1Q5TYW2 823 aa8.57□□□□□ -1.04
HDAC9-212ENST00000432645 ANKRD20A3Q5VUR7 823 aa8.57□□□□□ -1.04
HDAC9-212ENST00000432645 BNIPLQ7Z465 357 aa8.57□□□□□ -1.04
HDAC9-212ENST00000432645 CEP57Q86XR8 500 aa8.57□□□□□ -1.04
HDAC9-212ENST00000432645 CTAGE3PQ8IX95 158 aa8.57□□□□□ -1.04
HDAC9-212ENST00000432645 CACNA2D3Q8IZS8 1091 aa8.57□□□□□ -1.04
HDAC9-212ENST00000432645 THEM5Q8N1Q8 247 aa8.57□□□□□ -1.04
HDAC9-212ENST00000432645 USP33Q8TEY7 942 aa8.57□□□□□ -1.04
HDAC9-212ENST00000432645 B3GALT6Q96L58 329 aa8.57□□□□□ -1.04
HDAC9-212ENST00000432645 PGLYRP2Q96PD5 576 aa8.57□□□□□ -1.04
HDAC9-212ENST00000432645 SMC6Q96SB8 1091 aa8.57□□□□□ -1.04
HDAC9-212ENST00000432645 SIK2Q9H0K1 926 aa8.57□□□□□ -1.04
HDAC9-212ENST00000432645 ACSS3Q9H6R3 686 aa8.57□□□□□ -1.04
HDAC9-212ENST00000432645 CSNK1G1Q9HCP0 422 aa8.57□□□□□ -1.04
HDAC9-212ENST00000432645 SLC40A1Q9NP59 571 aa8.57□□□□□ -1.04
HDAC9-212ENST00000432645 DMAP1Q9NPF5 467 aaPredicted RBP8.57□□□□□ -1.04
HDAC9-212ENST00000432645 RGS18Q9NS28 235 aa8.57□□□□□ -1.04
HDAC9-212ENST00000432645 ABI2Q9NYB9 513 aaPredicted RBP8.57□□□□□ -1.04
HDAC9-212ENST00000432645 ZC3H7BQ9UGR2 993 aaKnown RBP8.57□□□□□ -1.04
HDAC9-212ENST00000432645 SPO11Q9Y5K1 396 aa8.57□□□□□ -1.04
HDAC9-212ENST00000432645 FAM47DPA6NHR8 397 aa8.56□□□□□ -1.04
HDAC9-212ENST00000432645 SRRM3A6NNA2 597 aaPredicted RBP8.56□□□□□ -1.04
HDAC9-212ENST00000432645 ZNF487B1APH4 448 aa8.56□□□□□ -1.04
HDAC9-212ENST00000432645 C9IYK1 514 aa8.56□□□□□ -1.04
HDAC9-212ENST00000432645 RNF103O00237 685 aa8.56□□□□□ -1.04
HDAC9-212ENST00000432645 DGKIO75912 1065 aa8.56□□□□□ -1.04
HDAC9-212ENST00000432645 FSBPO95073 299 aa8.56□□□□□ -1.04
HDAC9-212ENST00000432645 CA4P22748 312 aa8.56□□□□□ -1.04
HDAC9-212ENST00000432645 TPI1P60174 286 aa8.56□□□□□ -1.04
HDAC9-212ENST00000432645 TSPY1Q01534 308 aa8.56□□□□□ -1.04
HDAC9-212ENST00000432645 XRCC4Q13426 336 aa8.56□□□□□ -1.04
HDAC9-212ENST00000432645 FAM26DQ5JW98 314 aa8.56□□□□□ -1.04
HDAC9-212ENST00000432645 DCLRE1AQ6PJP8 1040 aa8.56□□□□□ -1.04
HDAC9-212ENST00000432645 TRAF7Q6Q0C0 670 aa8.56□□□□□ -1.04
HDAC9-212ENST00000432645 SPATA2LQ8IUW3 424 aaPredicted RBP8.56□□□□□ -1.04
HDAC9-212ENST00000432645 RIBC1Q8N443 379 aaPredicted RBP8.56□□□□□ -1.04
HDAC9-212ENST00000432645 PDCD7Q8N8D1 485 aaKnown RBP8.56□□□□□ -1.04
HDAC9-212ENST00000432645 COLGALT1Q8NBJ5 622 aa8.56□□□□□ -1.04
HDAC9-212ENST00000432645 SH3TC2Q8TF17 1288 aa8.56□□□□□ -1.04
HDAC9-212ENST00000432645 SUSD3Q96L08 255 aa8.56□□□□□ -1.04
HDAC9-212ENST00000432645 OLFM3Q96PB7 478 aa8.56□□□□□ -1.04
HDAC9-212ENST00000432645 GORASP1Q9BQQ3 440 aa8.56□□□□□ -1.04
HDAC9-212ENST00000432645 HMX1Q9NP08 348 aaPredicted RBP8.56□□□□□ -1.04
HDAC9-212ENST00000432645 HCSTQ9UBK5 93 aa8.56□□□□□ -1.04
HDAC9-212ENST00000432645 OR12D3Q9UGF7 316 aa8.56□□□□□ -1.04
HDAC9-212ENST00000432645 GGT7Q9UJ14 662 aa8.56□□□□□ -1.04
HDAC9-212ENST00000432645 FBXW11Q9UKB1 542 aa8.56□□□□□ -1.04
HDAC9-212ENST00000432645 MOXD2PA6NHM9 499 aa8.56□□□□□ -1.04
HDAC9-212ENST00000432645 GCATO75600 419 aa8.56□□□□□ -1.04
HDAC9-212ENST00000432645 CYP11A1P05108 521 aa8.56□□□□□ -1.04
HDAC9-212ENST00000432645 SKIP12755 728 aa8.56□□□□□ -1.04
HDAC9-212ENST00000432645 FOSL1P15407 271 aa8.56□□□□□ -1.04
HDAC9-212ENST00000432645 GATMP50440 423 aa8.56□□□□□ -1.04
HDAC9-212ENST00000432645 WDR4P57081 412 aaKnown RBP8.56□□□□□ -1.04
HDAC9-212ENST00000432645 OLIG2Q13516 323 aa8.56□□□□□ -1.04
HDAC9-212ENST00000432645 NOMO2Q5JPE7 1267 aa8.56□□□□□ -1.04
HDAC9-212ENST00000432645 PPP1R21Q6ZMI0 780 aa8.56□□□□□ -1.04
HDAC9-212ENST00000432645 TAC4Q86UU9 113 aa8.56□□□□□ -1.04
HDAC9-212ENST00000432645 TDRPQ86YL5 185 aa8.56□□□□□ -1.04
HDAC9-212ENST00000432645 GPR152Q8TDT2 470 aa8.56□□□□□ -1.04
HDAC9-212ENST00000432645 SPOCK2Q92563 424 aa8.56□□□□□ -1.04
HDAC9-212ENST00000432645 TGS1Q96RS0 853 aaKnown RBP8.56□□□□□ -1.04
HDAC9-212ENST00000432645 CYTH2Q99418 400 aa8.56□□□□□ -1.04
HDAC9-212ENST00000432645 SLC39A3Q9BRY0 314 aa8.56□□□□□ -1.04
HDAC9-212ENST00000432645 CENPOQ9BU64 300 aa8.56□□□□□ -1.04
HDAC9-212ENST00000432645 TBC1D13Q9NVG8 400 aa8.56□□□□□ -1.04
HDAC9-212ENST00000432645 SFMBT1Q9UHJ3 866 aa8.56□□□□□ -1.04
HDAC9-212ENST00000432645 SLC24A2Q9UI40 661 aa8.56□□□□□ -1.04
HDAC9-212ENST00000432645 IKBKGQ9Y6K9 419 aa8.56□□□□□ -1.04
HDAC9-212ENST00000432645 THSD7BQ9C0I4 1608 aa8.56□□□□□ -1.04
HDAC9-212ENST00000432645 C5orf60A6NFR6 353 aa8.55□□□□□ -1.04
HDAC9-212ENST00000432645 MSI1O43347 362 aaKnown RBP8.55□□□□□ -1.04
HDAC9-212ENST00000432645 TOMM70O94826 608 aa8.55□□□□□ -1.04
HDAC9-212ENST00000432645 EPHB2P29323 1055 aa8.55□□□□□ -1.04
HDAC9-212ENST00000432645 PBX3P40426 434 aa8.55□□□□□ -1.04
HDAC9-212ENST00000432645 SLC5A3P53794 718 aa8.55□□□□□ -1.04
HDAC9-212ENST00000432645 ARPP19P56211 112 aa8.55□□□□□ -1.04
HDAC9-212ENST00000432645 DPYSQ14117 519 aa8.55□□□□□ -1.04
HDAC9-212ENST00000432645 SPARCL1Q14515 664 aa8.55□□□□□ -1.04
HDAC9-212ENST00000432645 KLHL38Q2WGJ6 581 aa8.55□□□□□ -1.04
HDAC9-212ENST00000432645 CASC4Q6P4E1 433 aa8.55□□□□□ -1.04
HDAC9-212ENST00000432645 FAM47EQ6ZV65 393 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms