RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 SERPINA4P29622 427 aa2.42□□□□□ -2.02
CDC40-204ENST00000431461 HALP42357 657 aa2.42□□□□□ -2.02
CDC40-204ENST00000431461 KCNJ4P48050 445 aa2.42□□□□□ -2.02
CDC40-204ENST00000431461 TRAPPC10P48553 1259 aa2.42□□□□□ -2.02
CDC40-204ENST00000431461 ACTR2P61160 394 aa2.42□□□□□ -2.02
CDC40-204ENST00000431461 SF3A3Q12874 501 aaKnown RBP eCLIP2.42□□□□□ -2.02
CDC40-204ENST00000431461 ANKRD1Q15327 319 aa2.42□□□□□ -2.02
CDC40-204ENST00000431461 RPS6KA2Q15349 733 aa2.42□□□□□ -2.02
CDC40-204ENST00000431461 LY6KQ17RY6 165 aa2.42□□□□□ -2.02
CDC40-204ENST00000431461 FAM110CQ1W6H9 321 aa2.42□□□□□ -2.02
CDC40-204ENST00000431461 TMEM95Q3KNT9 176 aa2.42□□□□□ -2.02
CDC40-204ENST00000431461 TMEM196Q5HYL7 178 aa2.42□□□□□ -2.02
CDC40-204ENST00000431461 FBXO47Q5MNV8 452 aa2.42□□□□□ -2.02
CDC40-204ENST00000431461 ERAP2Q6P179 960 aa2.42□□□□□ -2.02
CDC40-204ENST00000431461 DCDC5Q6ZRR9 648 aa2.42□□□□□ -2.02
CDC40-204ENST00000431461 UBE2Q1Q7Z7E8 422 aa2.42□□□□□ -2.02
CDC40-204ENST00000431461 C11orf44Q8N8P7 122 aa2.42□□□□□ -2.02
CDC40-204ENST00000431461 ENDOVQ8N8Q3 282 aaKnown RBP2.42□□□□□ -2.02
CDC40-204ENST00000431461 FSIP1Q8NA03 581 aa2.42□□□□□ -2.02
CDC40-204ENST00000431461 SLC2A12Q8TD20 617 aa2.42□□□□□ -2.02
CDC40-204ENST00000431461 KAT2BQ92831 832 aa2.42□□□□□ -2.02
CDC40-204ENST00000431461 GCC1Q96CN9 775 aa2.42□□□□□ -2.02
CDC40-204ENST00000431461 P2RY11Q96G91 374 aa2.42□□□□□ -2.02
CDC40-204ENST00000431461 WDYHV1Q96HA8 205 aa2.42□□□□□ -2.02
CDC40-204ENST00000431461 ZSCAN31Q96LW9 406 aaPredicted RBP2.42□□□□□ -2.02
CDC40-204ENST00000431461 CTAGE1Q96RT6 745 aa2.42□□□□□ -2.02
CDC40-204ENST00000431461 MMS19Q96T76 1030 aa2.42□□□□□ -2.02
CDC40-204ENST00000431461 HTATIP2Q9BUP3 242 aa2.42□□□□□ -2.02
CDC40-204ENST00000431461 CDCP1Q9H5V8 836 aa2.42□□□□□ -2.02
CDC40-204ENST00000431461 CCDC134Q9H6E4 229 aa2.42□□□□□ -2.02
CDC40-204ENST00000431461 ELAC1Q9H777 363 aaKnown RBP2.42□□□□□ -2.02
CDC40-204ENST00000431461 SFXN1Q9H9B4 322 aa2.42□□□□□ -2.02
CDC40-204ENST00000431461 USP29Q9HBJ7 922 aa2.42□□□□□ -2.02
CDC40-204ENST00000431461 FNIP2Q9P278 1114 aa2.42□□□□□ -2.02
CDC40-204ENST00000431461 PGAP2Q9UHJ9 254 aa2.42□□□□□ -2.02
CDC40-204ENST00000431461 MORC2Q9Y6X9 1032 aaPredicted RBP2.42□□□□□ -2.02
CDC40-204ENST00000431461 TBC1D3DA0A087WVF3 549 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 TBC1D3IA0A087WXS9 549 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 TBC1D3EA0A087X179 549 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 TBC1D3KA0A087X1G2 549 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 C11orf97A0A1B0GVM6 126 aaPredicted RBP2.41□□□□□ -2.02
CDC40-204ENST00000431461 TCRBV5S1A1TA0A578 114 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 TBC1D3BA6NDS4 549 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 TBC1D3FA6NER0 549 aaPredicted RBP2.41□□□□□ -2.02
CDC40-204ENST00000431461 TBC1D3LB9A6J9 549 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 H3BNX3 289 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 DHHO43323 396 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 SMAD6O43541 496 aaKnown RBP2.41□□□□□ -2.02
CDC40-204ENST00000431461 EXOC3O60645 756 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 TAF5LO75529 589 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 FAM155BO75949 473 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 TK1P04183 234 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 ENO1P06733 434 aaKnown RBP2.41□□□□□ -2.02
CDC40-204ENST00000431461 CYP3A4P08684 503 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 TBC1D3HP0C7X1 549 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 CYP19A1P11511 503 aaPredicted RBP2.41□□□□□ -2.02
CDC40-204ENST00000431461 HOXD9P28356 352 aaPredicted RBP2.41□□□□□ -2.02
CDC40-204ENST00000431461 NTSR1P30989 418 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 AKT1P31749 480 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 GRK5P34947 590 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 STAT1P42224 750 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 RENBPP51606 427 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 COPB1P53618 953 aaKnown RBP2.41□□□□□ -2.02
CDC40-204ENST00000431461 WDR5P61964 334 aaKnown RBP2.41□□□□□ -2.02
CDC40-204ENST00000431461 VAMP2P63027 116 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 GPC5P78333 572 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 SP2Q02086 613 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 GHRHRQ02643 423 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 SRSF1Q07955 248 aaKnown RBP eCLIP2.41□□□□□ -2.02
CDC40-204ENST00000431461 FOXD4Q12950 439 aaPredicted RBP2.41□□□□□ -2.02
CDC40-204ENST00000431461 MFSD13AQ14CX5 517 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 TAF12Q16514 161 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 AAK1Q2M2I8 961 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 CTXN3Q4LDR2 81 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 ZNF585BQ52M93 769 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 CC2D1BQ5T0F9 858 aaKnown RBP2.41□□□□□ -2.02
CDC40-204ENST00000431461 TTC22Q5TAA0 569 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 TBC1D3GQ6DHY5 549 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 TBC1D3CQ6IPX1 549 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 MSANTD2Q6P1R3 559 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 C18orf65Q6ZTR6 163 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 PIK3AP1Q6ZUJ8 805 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 BCDIN3DQ7Z5W3 292 aaKnown RBP2.41□□□□□ -2.02
CDC40-204ENST00000431461 PIP4P1Q86T03 277 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 FOXP4Q8IVH2 680 aaPredicted RBP2.41□□□□□ -2.02
CDC40-204ENST00000431461 LAS2Q8IYD9 372 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 TBC1D3Q8IZP1 549 aaPredicted RBP2.41□□□□□ -2.02
CDC40-204ENST00000431461 TMEM57Q8N5G2 664 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 MYCT1Q8N699 235 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 METTL25Q8N6Q8 603 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 PTGR2Q8N8N7 351 aaPredicted RBP2.41□□□□□ -2.02
CDC40-204ENST00000431461 MYRIPQ8NFW9 859 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 MAFAQ8NHW3 353 aaPredicted RBP2.41□□□□□ -2.02
CDC40-204ENST00000431461 STT3BQ8TCJ2 826 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 ZNF398Q8TD17 642 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 HMGB4Q8WW32 186 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 ASB12Q8WXK4 309 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 AKAP1Q92667 903 aaKnown RBP eCLIP2.41□□□□□ -2.02
CDC40-204ENST00000431461 USP13Q92995 863 aaPredicted RBP2.41□□□□□ -2.02
CDC40-204ENST00000431461 CUL5Q93034 780 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms