RNA–Protein interactions for RNA: ENST00000431352.1

SEC13-211, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-211ENST00000431352 KREMEN1Q96MU8 473 aa14.42□□□□□ -0.1
SEC13-211ENST00000431352 INTS2Q9H0H0 1204 aaKnown RBP14.42□□□□□ -0.1
SEC13-211ENST00000431352 PABPC3Q9H361 631 aaKnown RBP14.42□□□□□ -0.1
SEC13-211ENST00000431352 FBXL12Q9NXK8 326 aa14.42□□□□□ -0.1
SEC13-211ENST00000431352 SERGEFQ9UGK8 458 aa14.42□□□□□ -0.1
SEC13-211ENST00000431352 SUN2Q9UH99 717 aa14.42□□□□□ -0.1
SEC13-211ENST00000431352 XPO7Q9UIA9 1087 aaKnown RBP14.42□□□□□ -0.1
SEC13-211ENST00000431352 INTS6Q9UL03 887 aaKnown RBP14.42□□□□□ -0.1
SEC13-211ENST00000431352 NCKAP1Q9Y2A7 1128 aa14.42□□□□□ -0.1
SEC13-211ENST00000431352 A0A1W2PP55 124 aa14.41□□□□□ -0.1
SEC13-211ENST00000431352 FAM221BA6H8Z2 402 aa14.41□□□□□ -0.1
SEC13-211ENST00000431352 TTC34A8MYJ7 566 aa14.41□□□□□ -0.1
SEC13-211ENST00000431352 CAPN9O14815 690 aa14.41□□□□□ -0.1
SEC13-211ENST00000431352 MID1O15344 667 aa14.41□□□□□ -0.1
SEC13-211ENST00000431352 RNASEH2AO75792 299 aaKnown RBP14.41□□□□□ -0.1
SEC13-211ENST00000431352 APOEP02649 317 aa14.41□□□□□ -0.1
SEC13-211ENST00000431352 FYNP06241 537 aa14.41□□□□□ -0.1
SEC13-211ENST00000431352 CD27P26842 260 aa14.41□□□□□ -0.1
SEC13-211ENST00000431352 GRIA4P48058 902 aa14.41□□□□□ -0.1
SEC13-211ENST00000431352 PSMD8P48556 350 aa14.41□□□□□ -0.1
SEC13-211ENST00000431352 CCT8P50990 548 aa14.41□□□□□ -0.1
SEC13-211ENST00000431352 GCNT1Q02742 428 aa14.41□□□□□ -0.1
SEC13-211ENST00000431352 HNRNPA1L2Q32P51 320 aaKnown RBP14.41□□□□□ -0.1
SEC13-211ENST00000431352 DCAF6Q58WW2 860 aa14.41□□□□□ -0.1
SEC13-211ENST00000431352 FSCBQ5H9T9 825 aa14.41□□□□□ -0.1
SEC13-211ENST00000431352 MS4A13Q5J8X5 152 aa14.41□□□□□ -0.1
SEC13-211ENST00000431352 PITRM1Q5JRX3 1037 aa14.41□□□□□ -0.1
SEC13-211ENST00000431352 RAP1GAP2Q684P5 730 aa14.41□□□□□ -0.1
SEC13-211ENST00000431352 KIAA0895LQ68EN5 471 aa14.41□□□□□ -0.1
SEC13-211ENST00000431352 C19orf48Q6RUI8 117 aa14.41□□□□□ -0.1
SEC13-211ENST00000431352 CCNI2Q6ZMN8 369 aaPredicted RBP14.41□□□□□ -0.1
SEC13-211ENST00000431352 PROSER1Q86XN7 944 aa14.41□□□□□ -0.1
SEC13-211ENST00000431352 MMAAQ8IVH4 418 aaKnown RBP14.41□□□□□ -0.1
SEC13-211ENST00000431352 LGI2Q8N0V4 545 aa14.41□□□□□ -0.1
SEC13-211ENST00000431352 ZNF557Q8N988 423 aaPredicted RBP14.41□□□□□ -0.1
SEC13-211ENST00000431352 FIBINQ8TAL6 211 aa14.41□□□□□ -0.1
SEC13-211ENST00000431352 BAHD1Q8TBE0 780 aaPredicted RBP14.41□□□□□ -0.1
SEC13-211ENST00000431352 MDM1Q8TC05 714 aa14.41□□□□□ -0.1
SEC13-211ENST00000431352 MYO19Q96H55 970 aa14.41□□□□□ -0.1
SEC13-211ENST00000431352 LMLNQ96KR4 655 aa14.41□□□□□ -0.1
SEC13-211ENST00000431352 TIGD1Q96MW7 591 aa14.41□□□□□ -0.1
SEC13-211ENST00000431352 SLC6A18Q96N87 628 aa14.41□□□□□ -0.1
SEC13-211ENST00000431352 RSPH9Q9H1X1 276 aaPredicted RBP14.41□□□□□ -0.1
SEC13-211ENST00000431352 SGK2Q9HBY8 427 aa14.41□□□□□ -0.1
SEC13-211ENST00000431352 TLR6Q9Y2C9 796 aa14.41□□□□□ -0.1
SEC13-211ENST00000431352 PCDHGB2Q9Y5G2 931 aa14.41□□□□□ -0.1
SEC13-211ENST00000431352 ANKRD11Q6UB99 2663 aaPredicted RBP14.4□□□□□ -0.1
SEC13-211ENST00000431352 BICDL2A1A5D9 508 aa14.4□□□□□ -0.1
SEC13-211ENST00000431352 PPP1R3GB7ZBB8 358 aa14.4□□□□□ -0.1
SEC13-211ENST00000431352 E5RJQ4 531 aa14.4□□□□□ -0.1
SEC13-211ENST00000431352 H0Y8X5 98 aa14.4□□□□□ -0.1
SEC13-211ENST00000431352 PMM2O15305 246 aa14.4□□□□□ -0.1
SEC13-211ENST00000431352 P4HA2O15460 535 aa14.4□□□□□ -0.1
SEC13-211ENST00000431352 SART1O43290 800 aaKnown RBP14.4□□□□□ -0.1
SEC13-211ENST00000431352 RNASEH1O60930 286 aaKnown RBP14.4□□□□□ -0.1
SEC13-211ENST00000431352 LETM1O95202 739 aaPredicted RBP14.4□□□□□ -0.1
SEC13-211ENST00000431352 LUC7L3O95232 432 aaKnown RBP14.4□□□□□ -0.1
SEC13-211ENST00000431352 AFPP02771 609 aaKnown RBP14.4□□□□□ -0.1
SEC13-211ENST00000431352 ASLP04424 464 aa14.4□□□□□ -0.1
SEC13-211ENST00000431352 BMP6P22004 513 aa14.4□□□□□ -0.1
SEC13-211ENST00000431352 C21orf59P57076 290 aa14.4□□□□□ -0.1
SEC13-211ENST00000431352 NUCB2P80303 420 aa14.4□□□□□ -0.1
SEC13-211ENST00000431352 KCNH2Q12809 1159 aa14.4□□□□□ -0.1
SEC13-211ENST00000431352 SUZ12Q15022 739 aaKnown RBP14.4□□□□□ -0.1
SEC13-211ENST00000431352 CST6Q15828 149 aa14.4□□□□□ -0.1
SEC13-211ENST00000431352 ZC3H12AQ5D1E8 599 aaKnown RBP14.4□□□□□ -0.1
SEC13-211ENST00000431352 SYPL2Q5VXT5 272 aa14.4□□□□□ -0.1
SEC13-211ENST00000431352 RNF219Q5W0B1 726 aaPredicted RBP14.4□□□□□ -0.1
SEC13-211ENST00000431352 GLRX5Q86SX6 157 aa14.4□□□□□ -0.1
SEC13-211ENST00000431352 CIR1Q86X95 450 aaPredicted RBP14.4□□□□□ -0.1
SEC13-211ENST00000431352 EHBP1Q8NDI1 1231 aa14.4□□□□□ -0.1
SEC13-211ENST00000431352 TTC17Q96AE7 1141 aa14.4□□□□□ -0.1
SEC13-211ENST00000431352 MRGPRX3Q96LB0 322 aa14.4□□□□□ -0.1
SEC13-211ENST00000431352 CDC6Q99741 560 aa14.4□□□□□ -0.1
SEC13-211ENST00000431352 OMDQ99983 421 aa14.4□□□□□ -0.1
SEC13-211ENST00000431352 CCDC86Q9H6F5 360 aaKnown RBP14.4□□□□□ -0.1
SEC13-211ENST00000431352 ACP6Q9NPH0 428 aa14.4□□□□□ -0.1
SEC13-211ENST00000431352 TOR4AQ9NXH8 423 aa14.4□□□□□ -0.1
SEC13-211ENST00000431352 TJP2Q9UDY2 1190 aa14.4□□□□□ -0.1
SEC13-211ENST00000431352 ERVW-1Q9UQF0 538 aa14.4□□□□□ -0.1
SEC13-211ENST00000431352 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.4□□□□□ -0.1
SEC13-211ENST00000431352 DSPP15924 2871 aaKnown RBP14.4□□□□□ -0.1
SEC13-211ENST00000431352 TMEM131Q92545 1883 aa14.4□□□□□ -0.1
SEC13-211ENST00000431352 KNL1Q8NG31 2342 aa14.4□□□□□ -0.11
SEC13-211ENST00000431352 DMXL2Q8TDJ6 3036 aa14.39□□□□□ -0.11
SEC13-211ENST00000431352 SYNJ2BP-COX16A0A087WUM0 186 aa14.39□□□□□ -0.11
SEC13-211ENST00000431352 PAPSS1O43252 624 aaPredicted RBP14.39□□□□□ -0.11
SEC13-211ENST00000431352 THAP12O43422 761 aa14.39□□□□□ -0.11
SEC13-211ENST00000431352 MOCS3O95396 460 aa14.39□□□□□ -0.11
SEC13-211ENST00000431352 IGHV4-34P06331 123 aa14.39□□□□□ -0.11
SEC13-211ENST00000431352 TACR2P21452 398 aa14.39□□□□□ -0.11
SEC13-211ENST00000431352 PPP1R2P41236 205 aa14.39□□□□□ -0.11
SEC13-211ENST00000431352 GRK6P43250 576 aa14.39□□□□□ -0.11
SEC13-211ENST00000431352 GPD2P43304 727 aa14.39□□□□□ -0.11
SEC13-211ENST00000431352 STK19P49842 368 aaPredicted RBP14.39□□□□□ -0.11
SEC13-211ENST00000431352 PITX1P78337 314 aaPredicted RBP14.39□□□□□ -0.11
SEC13-211ENST00000431352 PAK1Q13153 545 aa14.39□□□□□ -0.11
SEC13-211ENST00000431352 NNTQ13423 1086 aa14.39□□□□□ -0.11
SEC13-211ENST00000431352 BECN1Q14457 450 aa14.39□□□□□ -0.11
SEC13-211ENST00000431352 PRAMEF14Q5SWL7 426 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms