RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 GJD3Q8N144 294 aa11.35□□□□□ -0.59
CHD4-202ENST00000430771 PYROXD2Q8N2H3 581 aa11.35□□□□□ -0.59
CHD4-202ENST00000430771 SLC35F6Q8N357 371 aa11.35□□□□□ -0.59
CHD4-202ENST00000430771 SLC44A3Q8N4M1 653 aa11.35□□□□□ -0.59
CHD4-202ENST00000430771 EXD1Q8NHP7 514 aa11.35□□□□□ -0.59
CHD4-202ENST00000430771 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.35□□□□□ -0.59
CHD4-202ENST00000430771 TMA16Q96EY4 203 aaKnown RBP11.35□□□□□ -0.59
CHD4-202ENST00000430771 HES6Q96HZ4 224 aa11.35□□□□□ -0.59
CHD4-202ENST00000430771 CALN1Q9BXU9 219 aa11.35□□□□□ -0.59
CHD4-202ENST00000430771 PCDH18Q9HCL0 1135 aa11.35□□□□□ -0.59
CHD4-202ENST00000430771 SLC2A4RGQ9NR83 387 aa11.35□□□□□ -0.59
CHD4-202ENST00000430771 PACSIN2Q9UNF0 486 aaPredicted RBP11.35□□□□□ -0.59
CHD4-202ENST00000430771 JRKLQ9Y4A0 524 aa11.35□□□□□ -0.59
CHD4-202ENST00000430771 PCDHA3Q9Y5H8 950 aa11.35□□□□□ -0.59
CHD4-202ENST00000430771 XIRP2A4UGR9 3374 aa11.34□□□□□ -0.59
CHD4-202ENST00000430771 KIF2AO00139 706 aaPredicted RBP11.34□□□□□ -0.59
CHD4-202ENST00000430771 TRDMT1O14717 391 aaKnown RBP11.34□□□□□ -0.59
CHD4-202ENST00000430771 CACNG3O60359 315 aa11.34□□□□□ -0.59
CHD4-202ENST00000430771 TBL1XO60907 577 aa11.34□□□□□ -0.59
CHD4-202ENST00000430771 CLDN11O75508 207 aa11.34□□□□□ -0.59
CHD4-202ENST00000430771 LUC7L3O95232 432 aaKnown RBP11.34□□□□□ -0.59
CHD4-202ENST00000430771 PENKP01210 267 aaPredicted RBP11.34□□□□□ -0.59
CHD4-202ENST00000430771 TYRP14679 529 aa11.34□□□□□ -0.59
CHD4-202ENST00000430771 RHOQP17081 205 aa11.34□□□□□ -0.59
CHD4-202ENST00000430771 GOT1P17174 413 aa11.34□□□□□ -0.59
CHD4-202ENST00000430771 KDELR1P24390 212 aa11.34□□□□□ -0.59
CHD4-202ENST00000430771 HOXD9P28356 352 aaPredicted RBP11.34□□□□□ -0.59
CHD4-202ENST00000430771 SERPINB6P35237 376 aa11.34□□□□□ -0.59
CHD4-202ENST00000430771 EIF2DP41214 584 aaKnown RBP11.34□□□□□ -0.59
CHD4-202ENST00000430771 MARCKSL1P49006 195 aa11.34□□□□□ -0.59
CHD4-202ENST00000430771 HCAR3P49019 387 aa11.34□□□□□ -0.59
CHD4-202ENST00000430771 MAPKAPK2P49137 400 aa11.34□□□□□ -0.59
CHD4-202ENST00000430771 DNA2P51530 1060 aa11.34□□□□□ -0.59
CHD4-202ENST00000430771 OXCT1P55809 520 aa11.34□□□□□ -0.59
CHD4-202ENST00000430771 COPS2P61201 443 aa11.34□□□□□ -0.59
CHD4-202ENST00000430771 RPS24P62847 133 aaKnown RBP11.34□□□□□ -0.59
CHD4-202ENST00000430771 TNK2Q07912 1038 aa11.34□□□□□ -0.59
CHD4-202ENST00000430771 DPYSL3Q14195 570 aa11.34□□□□□ -0.59
CHD4-202ENST00000430771 PPP2R5EQ16537 467 aa11.34□□□□□ -0.59
CHD4-202ENST00000430771 PREPLQ4J6C6 727 aaPredicted RBP11.34□□□□□ -0.59
CHD4-202ENST00000430771 C6orf118Q5T5N4 469 aa11.34□□□□□ -0.59
CHD4-202ENST00000430771 FYB2Q5VWT5 728 aa11.34□□□□□ -0.59
CHD4-202ENST00000430771 ZNF683Q8IZ20 524 aa11.34□□□□□ -0.59
CHD4-202ENST00000430771 ADGRG2Q8IZP9 1017 aa11.34□□□□□ -0.59
CHD4-202ENST00000430771 C17orf53Q8N3J3 647 aaPredicted RBP11.34□□□□□ -0.59
CHD4-202ENST00000430771 FAM71BQ8TC56 605 aa11.34□□□□□ -0.59
CHD4-202ENST00000430771 KRT35Q92764 455 aa11.34□□□□□ -0.59
CHD4-202ENST00000430771 CSPG4P5Q96PW8 444 aa11.34□□□□□ -0.59
CHD4-202ENST00000430771 LINC00597Q9H2U6 94 aa11.34□□□□□ -0.59
CHD4-202ENST00000430771 C8orf33Q9H7E9 229 aaPredicted RBP11.34□□□□□ -0.59
CHD4-202ENST00000430771 PRDM16Q9HAZ2 1276 aa11.34□□□□□ -0.59
CHD4-202ENST00000430771 GTSE1Q9NYZ3 720 aa11.34□□□□□ -0.59
CHD4-202ENST00000430771 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.34□□□□□ -0.59
CHD4-202ENST00000430771 NEU3Q9UQ49 428 aa11.34□□□□□ -0.59
CHD4-202ENST00000430771 SNX10Q9Y5X0 201 aa11.34□□□□□ -0.59
CHD4-202ENST00000430771 MIA3Q5JRA6 1907 aa11.33□□□□□ -0.6
CHD4-202ENST00000430771 DRGXA6NNA5 263 aa11.33□□□□□ -0.6
CHD4-202ENST00000430771 FAM72CH0Y354 149 aa11.33□□□□□ -0.6
CHD4-202ENST00000430771 H0Y626 953 aa11.33□□□□□ -0.6
CHD4-202ENST00000430771 DDX3YO15523 660 aaKnown RBP11.33□□□□□ -0.6
CHD4-202ENST00000430771 ZRANB2O95218 330 aaKnown RBP eCLIP11.33□□□□□ -0.6
CHD4-202ENST00000430771 TUBB4AP04350 444 aa11.33□□□□□ -0.6
CHD4-202ENST00000430771 PTPN7P35236 360 aa11.33□□□□□ -0.6
CHD4-202ENST00000430771 SGSHP51688 502 aa11.33□□□□□ -0.6
CHD4-202ENST00000430771 ARSEP51690 589 aa11.33□□□□□ -0.6
CHD4-202ENST00000430771 DPYSQ14117 519 aa11.33□□□□□ -0.6
CHD4-202ENST00000430771 TFDP3Q5H9I0 405 aa11.33□□□□□ -0.6
CHD4-202ENST00000430771 FAM72AQ5TYM5 149 aa11.33□□□□□ -0.6
CHD4-202ENST00000430771 RNF43Q68DV7 783 aa11.33□□□□□ -0.6
CHD4-202ENST00000430771 FAM72DQ6L9T8 149 aa11.33□□□□□ -0.6
CHD4-202ENST00000430771 RHBDF2Q6PJF5 856 aa11.33□□□□□ -0.6
CHD4-202ENST00000430771 C14orf80Q86SX3 495 aa11.33□□□□□ -0.6
CHD4-202ENST00000430771 FAM72BQ86X60 149 aa11.33□□□□□ -0.6
CHD4-202ENST00000430771 RNF135Q8IUD6 432 aa11.33□□□□□ -0.6
CHD4-202ENST00000430771 SUGP1Q8IWZ8 645 aaKnown RBP11.33□□□□□ -0.6
CHD4-202ENST00000430771 UBALD2Q8IYN6 164 aa11.33□□□□□ -0.6
CHD4-202ENST00000430771 RCOR2Q8IZ40 523 aa11.33□□□□□ -0.6
CHD4-202ENST00000430771 CARNMT1Q8N4J0 409 aa11.33□□□□□ -0.6
CHD4-202ENST00000430771 RTL3Q8N8U3 475 aaKnown RBP11.33□□□□□ -0.6
CHD4-202ENST00000430771 RAPGEF5Q92565 580 aa11.33□□□□□ -0.6
CHD4-202ENST00000430771 TSC1Q92574 1164 aa11.33□□□□□ -0.6
CHD4-202ENST00000430771 BHMTQ93088 406 aa11.33□□□□□ -0.6
CHD4-202ENST00000430771 IGSF8Q969P0 613 aa11.33□□□□□ -0.6
CHD4-202ENST00000430771 FAF2Q96CS3 445 aa11.33□□□□□ -0.6
CHD4-202ENST00000430771 NAPGQ99747 312 aaPredicted RBP11.33□□□□□ -0.6
CHD4-202ENST00000430771 MAK16Q9BXY0 300 aaKnown RBP11.33□□□□□ -0.6
CHD4-202ENST00000430771 SLC2A11Q9BYW1 496 aa11.33□□□□□ -0.6
CHD4-202ENST00000430771 CARD9Q9H257 536 aa11.33□□□□□ -0.6
CHD4-202ENST00000430771 TMEM248Q9NWD8 314 aa11.33□□□□□ -0.6
CHD4-202ENST00000430771 CWC15Q9P013 229 aaKnown RBP11.33□□□□□ -0.6
CHD4-202ENST00000430771 PIAS3Q9Y6X2 628 aa11.33□□□□□ -0.6
CHD4-202ENST00000430771 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.32□□□□□ -0.6
CHD4-202ENST00000430771 CTAGE9A4FU28 777 aa11.32□□□□□ -0.6
CHD4-202ENST00000430771 WASH4PA8MWX3 477 aa11.32□□□□□ -0.6
CHD4-202ENST00000430771 APOL1O14791 398 aa11.32□□□□□ -0.6
CHD4-202ENST00000430771 NARSO43776 548 aaKnown RBP11.32□□□□□ -0.6
CHD4-202ENST00000430771 RHOCP08134 193 aa11.32□□□□□ -0.6
CHD4-202ENST00000430771 CD48P09326 243 aa11.32□□□□□ -0.6
CHD4-202ENST00000430771 GLULP15104 373 aa11.32□□□□□ -0.6
CHD4-202ENST00000430771 ZFXP17010 805 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 751.3 ms