RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 VAV1P15498 845 aa12.21□□□□□ -0.45
HDAC4-202ENST00000430200 CLCN1P35523 988 aa12.21□□□□□ -0.45
HDAC4-202ENST00000430200 SLC11A2P49281 568 aa12.21□□□□□ -0.45
HDAC4-202ENST00000430200 ZNF445P59923 1031 aa12.21□□□□□ -0.45
HDAC4-202ENST00000430200 CETN1Q12798 172 aa12.21□□□□□ -0.45
HDAC4-202ENST00000430200 ST3GAL2Q16842 350 aa12.21□□□□□ -0.45
HDAC4-202ENST00000430200 PLEKHG6Q3KR16 790 aa12.21□□□□□ -0.45
HDAC4-202ENST00000430200 PITRM1Q5JRX3 1037 aa12.21□□□□□ -0.45
HDAC4-202ENST00000430200 MPP7Q5T2T1 576 aa12.21□□□□□ -0.45
HDAC4-202ENST00000430200 TRNP1Q6NT89 227 aa12.21□□□□□ -0.45
HDAC4-202ENST00000430200 OLFML1Q6UWY5 402 aa12.21□□□□□ -0.45
HDAC4-202ENST00000430200 RGL4Q8IZJ4 473 aa12.21□□□□□ -0.45
HDAC4-202ENST00000430200 LGI2Q8N0V4 545 aa12.21□□□□□ -0.45
HDAC4-202ENST00000430200 CARNMT1Q8N4J0 409 aa12.21□□□□□ -0.45
HDAC4-202ENST00000430200 STK32AQ8WU08 396 aa12.21□□□□□ -0.45
HDAC4-202ENST00000430200 LHX5Q9H2C1 402 aa12.21□□□□□ -0.45
HDAC4-202ENST00000430200 DNAAF2Q9NVR5 837 aaKnown RBP12.21□□□□□ -0.45
HDAC4-202ENST00000430200 EIF2B4Q9UI10 523 aaKnown RBP12.21□□□□□ -0.45
HDAC4-202ENST00000430200 FNDC3AQ9Y2H6 1198 aaKnown RBP12.21□□□□□ -0.45
HDAC4-202ENST00000430200 FHOD1Q9Y613 1164 aa12.21□□□□□ -0.45
HDAC4-202ENST00000430200 MYLKQ15746 1914 aa12.2□□□□□ -0.46
HDAC4-202ENST00000430200 SYNJ2BP-COX16A0A087WUM0 186 aa12.2□□□□□ -0.46
HDAC4-202ENST00000430200 TTC34A8MYJ7 566 aa12.2□□□□□ -0.46
HDAC4-202ENST00000430200 HYAL3O43820 417 aaPredicted RBP12.2□□□□□ -0.46
HDAC4-202ENST00000430200 SIN3BO75182 1162 aa12.2□□□□□ -0.46
HDAC4-202ENST00000430200 LUC7L3O95232 432 aaKnown RBP12.2□□□□□ -0.46
HDAC4-202ENST00000430200 CEACAM1P13688 526 aa12.2□□□□□ -0.46
HDAC4-202ENST00000430200 TACR2P21452 398 aa12.2□□□□□ -0.46
HDAC4-202ENST00000430200 USP8P40818 1118 aa12.2□□□□□ -0.46
HDAC4-202ENST00000430200 GFPT1Q06210 699 aaPredicted RBP12.2□□□□□ -0.46
HDAC4-202ENST00000430200 KCNMA1Q12791 1236 aa12.2□□□□□ -0.46
HDAC4-202ENST00000430200 EXOC3L4Q17RC7 722 aa12.2□□□□□ -0.46
HDAC4-202ENST00000430200 KCNT1Q5JUK3 1230 aa12.2□□□□□ -0.46
HDAC4-202ENST00000430200 CXorf57Q6NSI4 855 aaKnown RBP12.2□□□□□ -0.46
HDAC4-202ENST00000430200 GBP6Q6ZN66 633 aa12.2□□□□□ -0.46
HDAC4-202ENST00000430200 BEND5Q7L4P6 421 aa12.2□□□□□ -0.46
HDAC4-202ENST00000430200 CHSY1Q86X52 802 aa12.2□□□□□ -0.46
HDAC4-202ENST00000430200 CREBRFQ8IUR6 639 aa12.2□□□□□ -0.46
HDAC4-202ENST00000430200 UNC45BQ8IWX7 931 aa12.2□□□□□ -0.46
HDAC4-202ENST00000430200 DHX40Q8IX18 779 aaKnown RBP12.2□□□□□ -0.46
HDAC4-202ENST00000430200 DEFB106AQ8N104 65 aa12.2□□□□□ -0.46
HDAC4-202ENST00000430200 FIBINQ8TAL6 211 aa12.2□□□□□ -0.46
HDAC4-202ENST00000430200 IGSF8Q969P0 613 aa12.2□□□□□ -0.46
HDAC4-202ENST00000430200 AZIN2Q96A70 460 aa12.2□□□□□ -0.46
HDAC4-202ENST00000430200 TTC17Q96AE7 1141 aa12.2□□□□□ -0.46
HDAC4-202ENST00000430200 MIR1-1HGQ9H1L0 117 aa12.2□□□□□ -0.46
HDAC4-202ENST00000430200 POPDC2Q9HBU9 364 aa12.2□□□□□ -0.46
HDAC4-202ENST00000430200 TMPRSS4Q9NRS4 437 aa12.2□□□□□ -0.46
HDAC4-202ENST00000430200 SAMSN1Q9NSI8 373 aaKnown RBP12.2□□□□□ -0.46
HDAC4-202ENST00000430200 CHMP5Q9NZZ3 219 aa12.2□□□□□ -0.46
HDAC4-202ENST00000430200 COX16Q9P0S2 106 aa12.2□□□□□ -0.46
HDAC4-202ENST00000430200 KLK13Q9UKR3 277 aa12.2□□□□□ -0.46
HDAC4-202ENST00000430200 PCDHGC3Q9UN70 934 aa12.2□□□□□ -0.46
HDAC4-202ENST00000430200 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.2□□□□□ -0.46
HDAC4-202ENST00000430200 SNX10Q9Y5X0 201 aa12.2□□□□□ -0.46
HDAC4-202ENST00000430200 LRRK1Q38SD2 2015 aa12.2□□□□□ -0.46
HDAC4-202ENST00000430200 ITIH6Q6UXX5 1313 aa12.19□□□□□ -0.46
HDAC4-202ENST00000430200 GTPBP10A4D1E9 387 aaKnown RBP12.19□□□□□ -0.46
HDAC4-202ENST00000430200 METTL12A8MUP2 240 aa12.19□□□□□ -0.46
HDAC4-202ENST00000430200 KCNU1A8MYU2 1149 aa12.19□□□□□ -0.46
HDAC4-202ENST00000430200 UPK3BL1B0FP48 263 aa12.19□□□□□ -0.46
HDAC4-202ENST00000430200 UPK3BL2E5RIL1 263 aa12.19□□□□□ -0.46
HDAC4-202ENST00000430200 FOXN3O00409 490 aaPredicted RBP12.19□□□□□ -0.46
HDAC4-202ENST00000430200 SH3BP5O60239 455 aa12.19□□□□□ -0.46
HDAC4-202ENST00000430200 IGHV4-34P06331 123 aa12.19□□□□□ -0.46
HDAC4-202ENST00000430200 MZF1P28698 734 aaPredicted RBP12.19□□□□□ -0.46
HDAC4-202ENST00000430200 ACADSBP45954 432 aa12.19□□□□□ -0.46
HDAC4-202ENST00000430200 MTIF2P46199 727 aaKnown RBP12.19□□□□□ -0.46
HDAC4-202ENST00000430200 YWHAZP63104 245 aaKnown RBP12.19□□□□□ -0.46
HDAC4-202ENST00000430200 CDH18Q13634 790 aa12.19□□□□□ -0.46
HDAC4-202ENST00000430200 MAN2A1Q16706 1144 aa12.19□□□□□ -0.46
HDAC4-202ENST00000430200 HNRNPA1L2Q32P51 320 aaKnown RBP12.19□□□□□ -0.46
HDAC4-202ENST00000430200 C2CD6Q53TS8 623 aa12.19□□□□□ -0.46
HDAC4-202ENST00000430200 ENOSF1Q7L5Y1 443 aa12.19□□□□□ -0.46
HDAC4-202ENST00000430200 AADATQ8N5Z0 425 aa12.19□□□□□ -0.46
HDAC4-202ENST00000430200 CADM4Q8NFZ8 388 aa12.19□□□□□ -0.46
HDAC4-202ENST00000430200 CEP76Q8TAP6 659 aa12.19□□□□□ -0.46
HDAC4-202ENST00000430200 GOLGA1Q92805 767 aa12.19□□□□□ -0.46
HDAC4-202ENST00000430200 GATA6Q92908 595 aa12.19□□□□□ -0.46
HDAC4-202ENST00000430200 BIRC7Q96CA5 298 aa12.19□□□□□ -0.46
HDAC4-202ENST00000430200 RPL10LQ96L21 214 aaKnown RBP12.19□□□□□ -0.46
HDAC4-202ENST00000430200 SCNM1Q9BWG6 230 aa12.19□□□□□ -0.46
HDAC4-202ENST00000430200 RSPH9Q9H1X1 276 aaPredicted RBP12.19□□□□□ -0.46
HDAC4-202ENST00000430200 THAP9Q9H5L6 903 aa12.19□□□□□ -0.46
HDAC4-202ENST00000430200 FAM204AQ9H8W3 233 aa12.19□□□□□ -0.46
HDAC4-202ENST00000430200 EBF2Q9HAK2 575 aa12.19□□□□□ -0.46
HDAC4-202ENST00000430200 PIGVQ9NUD9 493 aa12.19□□□□□ -0.46
HDAC4-202ENST00000430200 SLCO3A1Q9UIG8 710 aa12.19□□□□□ -0.46
HDAC4-202ENST00000430200 DNAJC12Q9UKB3 198 aa12.19□□□□□ -0.46
HDAC4-202ENST00000430200 RALYQ9UKM9 306 aaKnown RBP12.19□□□□□ -0.46
HDAC4-202ENST00000430200 ERVW-1Q9UQF0 538 aa12.19□□□□□ -0.46
HDAC4-202ENST00000430200 ARID1BQ8NFD5 2236 aaPredicted RBP12.18□□□□□ -0.46
HDAC4-202ENST00000430200 ANKRD36A6QL64 1941 aa12.18□□□□□ -0.46
HDAC4-202ENST00000430200 A0A1B0GTW7 788 aa12.18□□□□□ -0.46
HDAC4-202ENST00000430200 A0A1B0GVT2 93 aa12.18□□□□□ -0.46
HDAC4-202ENST00000430200 RNF103O00237 685 aa12.18□□□□□ -0.46
HDAC4-202ENST00000430200 PLK4O00444 970 aa12.18□□□□□ -0.46
HDAC4-202ENST00000430200 EPHB6O15197 1021 aa12.18□□□□□ -0.46
HDAC4-202ENST00000430200 SART1O43290 800 aaKnown RBP12.18□□□□□ -0.46
HDAC4-202ENST00000430200 MED7O43513 233 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms