RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 SREBF2Q12772 1141 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 SPANXN3Q5MJ09 141 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 ITPRIPL1Q6GPH6 555 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 KYAT3Q6YP21 454 aaKnown RBP14.06□□□□□ -0.16
THBS3-202ENST00000428962 AGMOQ6ZNB7 445 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 CDHR3Q6ZTQ4 885 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 GPRIN1Q7Z2K8 1008 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 CLNKQ7Z7G1 428 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 C3orf58Q8NDZ4 430 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 ARMC2Q8NEN0 867 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 MYLPFQ96A32 169 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 E2F7Q96AV8 911 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 HDAC11Q96DB2 347 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 KCNK16Q96T55 309 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 VAT1Q99536 393 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 ACBD6Q9BR61 282 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 SLC13A1Q9BZW2 595 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 MIOSQ9NXC5 875 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 SIRPGQ9P1W8 387 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 TXNDC16Q9P2K2 825 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 CACNG4Q9UBN1 327 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 LNPEPQ9UIQ6 1025 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 TRHDEQ9UKU6 1024 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 TIMM13Q9Y5L4 95 aaPredicted RBP14.06□□□□□ -0.16
THBS3-202ENST00000428962 NR2E3Q9Y5X4 410 aa14.06□□□□□ -0.16
THBS3-202ENST00000428962 HHLA1C9JL84 531 aa14.05□□□□□ -0.16
THBS3-202ENST00000428962 F5H423 210 aaPredicted RBP14.05□□□□□ -0.16
THBS3-202ENST00000428962 TRAFD1O14545 582 aaPredicted RBP14.05□□□□□ -0.16
THBS3-202ENST00000428962 ZNF623O75123 536 aa14.05□□□□□ -0.16
THBS3-202ENST00000428962 GLRA3O75311 464 aa14.05□□□□□ -0.16
THBS3-202ENST00000428962 HAUS5O94927 633 aa14.05□□□□□ -0.16
THBS3-202ENST00000428962 CYP11A1P05108 521 aa14.05□□□□□ -0.16
THBS3-202ENST00000428962 SKIP12755 728 aa14.05□□□□□ -0.16
THBS3-202ENST00000428962 PTPN3P26045 913 aa14.05□□□□□ -0.16
THBS3-202ENST00000428962 FCGRTP55899 365 aa14.05□□□□□ -0.16
THBS3-202ENST00000428962 NKX3-2P78367 333 aa14.05□□□□□ -0.16
THBS3-202ENST00000428962 TMPRSS15P98073 1019 aa14.05□□□□□ -0.16
THBS3-202ENST00000428962 ZBTB16Q05516 673 aa14.05□□□□□ -0.16
THBS3-202ENST00000428962 CDK18Q07002 472 aa14.05□□□□□ -0.16
THBS3-202ENST00000428962 MAPRE1Q15691 268 aaKnown RBP14.05□□□□□ -0.16
THBS3-202ENST00000428962 TIGD5Q53EQ6 642 aa14.05□□□□□ -0.16
THBS3-202ENST00000428962 PACS1Q6VY07 963 aa14.05□□□□□ -0.16
THBS3-202ENST00000428962 MTDHQ86UE4 582 aaKnown RBP14.05□□□□□ -0.16
THBS3-202ENST00000428962 RASSF3Q86WH2 238 aa14.05□□□□□ -0.16
THBS3-202ENST00000428962 NUDCD3Q8IVD9 361 aa14.05□□□□□ -0.16
THBS3-202ENST00000428962 RNF169Q8NCN4 708 aa14.05□□□□□ -0.16
THBS3-202ENST00000428962 STKLD1Q8NE28 680 aa14.05□□□□□ -0.16
THBS3-202ENST00000428962 ADAM32Q8TC27 787 aa14.05□□□□□ -0.16
THBS3-202ENST00000428962 UROC1Q96N76 676 aa14.05□□□□□ -0.16
THBS3-202ENST00000428962 TRIM56Q9BRZ2 755 aaKnown RBP14.05□□□□□ -0.16
THBS3-202ENST00000428962 COLEC11Q9BWP8 271 aa14.05□□□□□ -0.16
THBS3-202ENST00000428962 TMEM120AQ9BXJ8 343 aa14.05□□□□□ -0.16
THBS3-202ENST00000428962 WDCPQ9H6R7 721 aa14.05□□□□□ -0.16
THBS3-202ENST00000428962 DMAP1Q9NPF5 467 aaPredicted RBP14.05□□□□□ -0.16
THBS3-202ENST00000428962 SYBUQ9NX95 663 aa14.05□□□□□ -0.16
THBS3-202ENST00000428962 SAGE1Q9NXZ1 904 aa14.05□□□□□ -0.16
THBS3-202ENST00000428962 HAO1Q9UJM8 370 aa14.05□□□□□ -0.16
THBS3-202ENST00000428962 TRIM33Q9UPN9 1127 aa14.05□□□□□ -0.16
THBS3-202ENST00000428962 VGLL3A8MV65 326 aa14.04□□□□□ -0.16
THBS3-202ENST00000428962 AP3B1O00203 1094 aa14.04□□□□□ -0.16
THBS3-202ENST00000428962 AP2A1O95782 977 aa14.04□□□□□ -0.16
THBS3-202ENST00000428962 DLDP09622 509 aaKnown RBP14.04□□□□□ -0.16
THBS3-202ENST00000428962 CCND1P24385 295 aa14.04□□□□□ -0.16
THBS3-202ENST00000428962 CYP2C18P33260 490 aa14.04□□□□□ -0.16
THBS3-202ENST00000428962 CXCR3P49682 368 aa14.04□□□□□ -0.16
THBS3-202ENST00000428962 GRIK3Q13003 919 aa14.04□□□□□ -0.16
THBS3-202ENST00000428962 FRG1Q14331 258 aaKnown RBP14.04□□□□□ -0.16
THBS3-202ENST00000428962 PREPLQ4J6C6 727 aaPredicted RBP14.04□□□□□ -0.16
THBS3-202ENST00000428962 PLEKHG4Q58EX7 1191 aa14.04□□□□□ -0.16
THBS3-202ENST00000428962 BSPRYQ5W0U4 402 aa14.04□□□□□ -0.16
THBS3-202ENST00000428962 BEND5Q7L4P6 421 aa14.04□□□□□ -0.16
THBS3-202ENST00000428962 CEP57Q86XR8 500 aa14.04□□□□□ -0.16
THBS3-202ENST00000428962 ARNTL2Q8WYA1 636 aa14.04□□□□□ -0.16
THBS3-202ENST00000428962 GBA3Q9H227 469 aa14.04□□□□□ -0.16
THBS3-202ENST00000428962 LRRC40Q9H9A6 602 aa14.04□□□□□ -0.16
THBS3-202ENST00000428962 KCNK4Q9NYG8 393 aa14.04□□□□□ -0.16
THBS3-202ENST00000428962 ZFATQ9P243 1243 aa14.04□□□□□ -0.16
THBS3-202ENST00000428962 HMX2A2RU54 273 aa14.04□□□□□ -0.16
THBS3-202ENST00000428962 FAM72CH0Y354 149 aa14.04□□□□□ -0.16
THBS3-202ENST00000428962 PGK1P00558 417 aa14.04□□□□□ -0.16
THBS3-202ENST00000428962 ATP5BP06576 529 aaKnown RBP14.04□□□□□ -0.16
THBS3-202ENST00000428962 BPGMP07738 259 aa14.04□□□□□ -0.16
THBS3-202ENST00000428962 IGFBP6P24592 240 aaPredicted RBP14.04□□□□□ -0.16
THBS3-202ENST00000428962 PTPN4P29074 926 aa14.04□□□□□ -0.16
THBS3-202ENST00000428962 THPOP40225 353 aa14.04□□□□□ -0.16
THBS3-202ENST00000428962 AFF1P51825 1210 aaKnown RBP14.04□□□□□ -0.16
THBS3-202ENST00000428962 CACNA2D1P54289 1103 aa14.04□□□□□ -0.16
THBS3-202ENST00000428962 COG7P83436 770 aa14.04□□□□□ -0.16
THBS3-202ENST00000428962 GALNT2Q10471 571 aa14.04□□□□□ -0.16
THBS3-202ENST00000428962 CRHR2Q13324 411 aa14.04□□□□□ -0.16
THBS3-202ENST00000428962 CHI3L2Q15782 390 aa14.04□□□□□ -0.16
THBS3-202ENST00000428962 WLSQ5T9L3 541 aa14.04□□□□□ -0.16
THBS3-202ENST00000428962 FAM72AQ5TYM5 149 aa14.04□□□□□ -0.16
THBS3-202ENST00000428962 PM20D1Q6GTS8 502 aa14.04□□□□□ -0.16
THBS3-202ENST00000428962 FAM72DQ6L9T8 149 aa14.04□□□□□ -0.16
THBS3-202ENST00000428962 FAM171BQ6P995 826 aa14.04□□□□□ -0.16
THBS3-202ENST00000428962 BHLHA9Q7RTU4 235 aa14.04□□□□□ -0.16
THBS3-202ENST00000428962 FAM72BQ86X60 149 aa14.04□□□□□ -0.16
THBS3-202ENST00000428962 THEM5Q8N1Q8 247 aa14.04□□□□□ -0.16
THBS3-202ENST00000428962 SKA1Q96BD8 255 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms