RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 TARSL2A2RTX5 802 aaKnown RBP9.15□□□□□ -0.94
SMC6-204ENST00000428868 H7C0C1 242 aa9.15□□□□□ -0.94
SMC6-204ENST00000428868 MCF2LO15068 1137 aa9.15□□□□□ -0.94
SMC6-204ENST00000428868 TP73O15350 636 aa9.15□□□□□ -0.94
SMC6-204ENST00000428868 ACSL4O60488 711 aa9.15□□□□□ -0.94
SMC6-204ENST00000428868 SEC31AO94979 1220 aaKnown RBP9.15□□□□□ -0.94
SMC6-204ENST00000428868 PRAMEF12O95522 483 aa9.15□□□□□ -0.94
SMC6-204ENST00000428868 ECEL1O95672 775 aa9.15□□□□□ -0.94
SMC6-204ENST00000428868 H2AFXP16104 143 aaPredicted RBP9.15□□□□□ -0.94
SMC6-204ENST00000428868 PTPN2P17706 415 aa9.15□□□□□ -0.94
SMC6-204ENST00000428868 HDCP19113 662 aa9.15□□□□□ -0.94
SMC6-204ENST00000428868 TACR2P21452 398 aa9.15□□□□□ -0.94
SMC6-204ENST00000428868 IVDP26440 423 aa9.15□□□□□ -0.94
SMC6-204ENST00000428868 RBL1P28749 1068 aa9.15□□□□□ -0.94
SMC6-204ENST00000428868 EPHB2P29323 1055 aa9.15□□□□□ -0.94
SMC6-204ENST00000428868 CDC25CP30307 473 aa9.15□□□□□ -0.94
SMC6-204ENST00000428868 HOXA9P31269 272 aa9.15□□□□□ -0.94
SMC6-204ENST00000428868 RPL21P46778 160 aaKnown RBP9.15□□□□□ -0.94
SMC6-204ENST00000428868 ATP5OP48047 213 aa9.15□□□□□ -0.94
SMC6-204ENST00000428868 MLLT6P55198 1093 aaPredicted RBP9.15□□□□□ -0.94
SMC6-204ENST00000428868 SMAD3P84022 425 aaKnown RBP9.15□□□□□ -0.94
SMC6-204ENST00000428868 NRG1Q02297 640 aaPredicted RBP9.15□□□□□ -0.94
SMC6-204ENST00000428868 PTK6Q13882 451 aa9.15□□□□□ -0.94
SMC6-204ENST00000428868 DHX34Q14147 1143 aaKnown RBP9.15□□□□□ -0.94
SMC6-204ENST00000428868 GLE1Q53GS7 698 aaKnown RBP9.15□□□□□ -0.94
SMC6-204ENST00000428868 RARS2Q5T160 578 aaKnown RBP9.15□□□□□ -0.94
SMC6-204ENST00000428868 GPR158Q5T848 1215 aa9.15□□□□□ -0.94
SMC6-204ENST00000428868 DUPD1Q68J44 220 aa9.15□□□□□ -0.94
SMC6-204ENST00000428868 RWDD4Q6NW29 188 aaKnown RBP9.15□□□□□ -0.94
SMC6-204ENST00000428868 FBXL22Q6P050 247 aa9.15□□□□□ -0.94
SMC6-204ENST00000428868 DRICH1Q6PGQ1 229 aaPredicted RBP9.15□□□□□ -0.94
SMC6-204ENST00000428868 ZDHHC24Q6UX98 284 aa9.15□□□□□ -0.94
SMC6-204ENST00000428868 NLRP14Q86W24 1093 aa9.15□□□□□ -0.94
SMC6-204ENST00000428868 CHSY1Q86X52 802 aa9.15□□□□□ -0.94
SMC6-204ENST00000428868 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.15□□□□□ -0.94
SMC6-204ENST00000428868 ARHGAP12Q8IWW6 846 aa9.15□□□□□ -0.94
SMC6-204ENST00000428868 CFAP52Q8N1V2 620 aa9.15□□□□□ -0.94
SMC6-204ENST00000428868 ELMOD1Q8N336 334 aa9.15□□□□□ -0.94
SMC6-204ENST00000428868 TAB3Q8N5C8 712 aaPredicted RBP9.15□□□□□ -0.94
SMC6-204ENST00000428868 TTC16Q8NEE8 873 aa9.15□□□□□ -0.94
SMC6-204ENST00000428868 CCDC26Q8TAB7 109 aa9.15□□□□□ -0.94
SMC6-204ENST00000428868 ITFG1Q8TB96 612 aa9.15□□□□□ -0.94
SMC6-204ENST00000428868 MRPS31Q92665 395 aaKnown RBP9.15□□□□□ -0.94
SMC6-204ENST00000428868 P3H4Q92791 437 aa9.15□□□□□ -0.94
SMC6-204ENST00000428868 SLCO2A1Q92959 643 aa9.15□□□□□ -0.94
SMC6-204ENST00000428868 PLD4Q96BZ4 506 aa9.15□□□□□ -0.94
SMC6-204ENST00000428868 TBC1D31Q96DN5 1066 aa9.15□□□□□ -0.94
SMC6-204ENST00000428868 BTN2A3PQ96KV6 586 aa9.15□□□□□ -0.94
SMC6-204ENST00000428868 ZSWIM3Q96MP5 696 aa9.15□□□□□ -0.94
SMC6-204ENST00000428868 CDK5RAP1Q96SZ6 601 aaKnown RBP9.15□□□□□ -0.94
SMC6-204ENST00000428868 LGMNQ99538 433 aa9.15□□□□□ -0.94
SMC6-204ENST00000428868 TTYH1Q9H313 450 aaPredicted RBP9.15□□□□□ -0.94
SMC6-204ENST00000428868 PRDM12Q9H4Q4 367 aa9.15□□□□□ -0.94
SMC6-204ENST00000428868 NOL6Q9H6R4 1146 aaKnown RBP9.15□□□□□ -0.94
SMC6-204ENST00000428868 GRHL1Q9NZI5 618 aa9.15□□□□□ -0.94
SMC6-204ENST00000428868 ZNF212Q9UDV6 495 aa9.15□□□□□ -0.94
SMC6-204ENST00000428868 AGO1Q9UL18 857 aaKnown RBP9.15□□□□□ -0.94
SMC6-204ENST00000428868 SNX24Q9Y343 169 aa9.15□□□□□ -0.94
SMC6-204ENST00000428868 SPTBN5Q9NRC6 3674 aaKnown RBP9.15□□□□□ -0.94
SMC6-204ENST00000428868 COL4A2P08572 1712 aa9.14□□□□□ -0.95
SMC6-204ENST00000428868 IGLV3-10A0A075B6K4 115 aa9.14□□□□□ -0.95
SMC6-204ENST00000428868 FAM187AA6NFU0 413 aa9.14□□□□□ -0.95
SMC6-204ENST00000428868 SPDYE4A6NLX3 237 aa9.14□□□□□ -0.95
SMC6-204ENST00000428868 DYNC1I1O14576 645 aa9.14□□□□□ -0.95
SMC6-204ENST00000428868 TSPAN3O60637 253 aa9.14□□□□□ -0.95
SMC6-204ENST00000428868 C1RP00736 705 aa9.14□□□□□ -0.95
SMC6-204ENST00000428868 KRT14P02533 472 aa9.14□□□□□ -0.95
SMC6-204ENST00000428868 CKMP06732 381 aa9.14□□□□□ -0.95
SMC6-204ENST00000428868 ITGAVP06756 1048 aa9.14□□□□□ -0.95
SMC6-204ENST00000428868 HNRNPA1P09651 372 aaKnown RBP eCLIP9.14□□□□□ -0.95
SMC6-204ENST00000428868 FAM153BP0C7A2 387 aa9.14□□□□□ -0.95
SMC6-204ENST00000428868 SLC2A3P11169 496 aa9.14□□□□□ -0.95
SMC6-204ENST00000428868 PPP3CCP48454 512 aa9.14□□□□□ -0.95
SMC6-204ENST00000428868 HCAR3P49019 387 aa9.14□□□□□ -0.95
SMC6-204ENST00000428868 CLCN6P51797 869 aa9.14□□□□□ -0.95
SMC6-204ENST00000428868 RPS24P62847 133 aaKnown RBP9.14□□□□□ -0.95
SMC6-204ENST00000428868 SLC7A9P82251 487 aa9.14□□□□□ -0.95
SMC6-204ENST00000428868 PPP1R7Q15435 360 aa9.14□□□□□ -0.95
SMC6-204ENST00000428868 FAM153CQ494X1 144 aa9.14□□□□□ -0.95
SMC6-204ENST00000428868 NUGGCQ68CJ6 796 aa9.14□□□□□ -0.95
SMC6-204ENST00000428868 WDR93Q6P2C0 686 aa9.14□□□□□ -0.95
SMC6-204ENST00000428868 DARS2Q6PI48 645 aaKnown RBP9.14□□□□□ -0.95
SMC6-204ENST00000428868 TMCO3Q6UWJ1 677 aa9.14□□□□□ -0.95
SMC6-204ENST00000428868 Q6ZNB5 142 aa9.14□□□□□ -0.95
SMC6-204ENST00000428868 PDZD4Q76G19 769 aaPredicted RBP9.14□□□□□ -0.95
SMC6-204ENST00000428868 TFAP2DQ7Z6R9 452 aa9.14□□□□□ -0.95
SMC6-204ENST00000428868 LGI2Q8N0V4 545 aa9.14□□□□□ -0.95
SMC6-204ENST00000428868 FAM71DQ8N9W8 422 aa9.14□□□□□ -0.95
SMC6-204ENST00000428868 TTC13Q8NBP0 860 aa9.14□□□□□ -0.95
SMC6-204ENST00000428868 ST13P5Q8NFI4 369 aaPredicted RBP9.14□□□□□ -0.95
SMC6-204ENST00000428868 OR52K2Q8NGK3 314 aa9.14□□□□□ -0.95
SMC6-204ENST00000428868 ATL2Q8NHH9 583 aa9.14□□□□□ -0.95
SMC6-204ENST00000428868 IFT81Q8WYA0 676 aa9.14□□□□□ -0.95
SMC6-204ENST00000428868 SEC14L1Q92503 715 aa9.14□□□□□ -0.95
SMC6-204ENST00000428868 SMG7Q92540 1137 aaKnown RBP9.14□□□□□ -0.95
SMC6-204ENST00000428868 QKIQ96PU8 341 aaKnown RBP eCLIP9.14□□□□□ -0.953e-12■■■■□ 22.8
SMC6-204ENST00000428868 ERP44Q9BS26 406 aa9.14□□□□□ -0.95
SMC6-204ENST00000428868 CEP41Q9BYV8 373 aa9.14□□□□□ -0.95
SMC6-204ENST00000428868 ZNF576Q9H609 170 aa9.14□□□□□ -0.95
SMC6-204ENST00000428868 USP29Q9HBJ7 922 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms