RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 HPSEQ9Y251 543 aa19.02■□□□□ 0.64
UPK3BP1-201ENST00000428678 PCDHGA1Q9Y5H4 931 aa19.02■□□□□ 0.64
UPK3BP1-201ENST00000428678 IRAK2O43187 625 aa19.01■□□□□ 0.63
UPK3BP1-201ENST00000428678 RFPL3O75679 317 aa19.01■□□□□ 0.63
UPK3BP1-201ENST00000428678 RNASEH2AO75792 299 aaKnown RBP19.01■□□□□ 0.63
UPK3BP1-201ENST00000428678 ZIC2O95409 532 aaPredicted RBP19.01■□□□□ 0.63
UPK3BP1-201ENST00000428678 WNT1P04628 370 aa19.01■□□□□ 0.63
UPK3BP1-201ENST00000428678 SETSIPP0DME0 302 aa19.01■□□□□ 0.63
UPK3BP1-201ENST00000428678 SLC6A4P31645 630 aa19.01■□□□□ 0.63
UPK3BP1-201ENST00000428678 CSKP41240 450 aa19.01■□□□□ 0.63
UPK3BP1-201ENST00000428678 YWHAEP62258 255 aaKnown RBP19.01■□□□□ 0.63
UPK3BP1-201ENST00000428678 SEMG2Q02383 582 aa19.01■□□□□ 0.63
UPK3BP1-201ENST00000428678 DPYDQ12882 1025 aa19.01■□□□□ 0.63
UPK3BP1-201ENST00000428678 DNAJC3Q13217 504 aa19.01■□□□□ 0.63
UPK3BP1-201ENST00000428678 CUL2Q13617 745 aa19.01■□□□□ 0.63
UPK3BP1-201ENST00000428678 CST6Q15828 149 aa19.01■□□□□ 0.63
UPK3BP1-201ENST00000428678 HNRNPA1L2Q32P51 320 aaKnown RBP19.01■□□□□ 0.63
UPK3BP1-201ENST00000428678 DCAF17Q5H9S7 520 aaPredicted RBP19.01■□□□□ 0.63
UPK3BP1-201ENST00000428678 TCERG1LQ5VWI1 586 aa19.01■□□□□ 0.63
UPK3BP1-201ENST00000428678 NUGGCQ68CJ6 796 aa19.01■□□□□ 0.63
UPK3BP1-201ENST00000428678 MSANTD2Q6P1R3 559 aa19.01■□□□□ 0.63
UPK3BP1-201ENST00000428678 HJURPQ8NCD3 748 aaPredicted RBP19.01■□□□□ 0.63
UPK3BP1-201ENST00000428678 TTC17Q96AE7 1141 aa19.01■□□□□ 0.63
UPK3BP1-201ENST00000428678 MYO19Q96H55 970 aa19.01■□□□□ 0.63
UPK3BP1-201ENST00000428678 NEUROG2Q9H2A3 272 aa19.01■□□□□ 0.63
UPK3BP1-201ENST00000428678 ZNF462Q96JM2 2506 aa19.01■□□□□ 0.63
UPK3BP1-201ENST00000428678 TYW5A2RUC4 315 aaKnown RBP19■□□□□ 0.63
UPK3BP1-201ENST00000428678 O00370 1275 aa19■□□□□ 0.63
UPK3BP1-201ENST00000428678 PIK3R2O00459 728 aa19■□□□□ 0.63
UPK3BP1-201ENST00000428678 CETN3O15182 167 aa19■□□□□ 0.63
UPK3BP1-201ENST00000428678 ACSL4O60488 711 aa19■□□□□ 0.63
UPK3BP1-201ENST00000428678 IGLV3-27P01718 113 aa19■□□□□ 0.63
UPK3BP1-201ENST00000428678 PRB1P04280 392 aa19■□□□□ 0.63
UPK3BP1-201ENST00000428678 ASLP04424 464 aa19■□□□□ 0.63
UPK3BP1-201ENST00000428678 CENPBP07199 599 aaPredicted RBP19■□□□□ 0.63
UPK3BP1-201ENST00000428678 ITPKBP27987 946 aa19■□□□□ 0.63
UPK3BP1-201ENST00000428678 CD38P28907 300 aa19■□□□□ 0.63
UPK3BP1-201ENST00000428678 RGS7P49802 495 aa19■□□□□ 0.63
UPK3BP1-201ENST00000428678 NDUFA8P51970 172 aa19■□□□□ 0.63
UPK3BP1-201ENST00000428678 TBX4P57082 545 aa19■□□□□ 0.63
UPK3BP1-201ENST00000428678 MCCD1P59942 119 aaPredicted RBP19■□□□□ 0.63
UPK3BP1-201ENST00000428678 EDRF1Q3B7T1 1238 aa19■□□□□ 0.63
UPK3BP1-201ENST00000428678 CBWD6Q4V339 395 aa19■□□□□ 0.63
UPK3BP1-201ENST00000428678 CBWD3Q5JTY5 395 aa19■□□□□ 0.63
UPK3BP1-201ENST00000428678 CBWD5Q5RIA9 395 aa19■□□□□ 0.63
UPK3BP1-201ENST00000428678 LRRC69Q6ZNQ3 347 aa19■□□□□ 0.63
UPK3BP1-201ENST00000428678 MMAAQ8IVH4 418 aaKnown RBP19■□□□□ 0.63
UPK3BP1-201ENST00000428678 CARNMT1Q8N4J0 409 aa19■□□□□ 0.63
UPK3BP1-201ENST00000428678 EID2Q8N6I1 236 aa19■□□□□ 0.63
UPK3BP1-201ENST00000428678 OR2T34Q8NGX1 318 aa19■□□□□ 0.63
UPK3BP1-201ENST00000428678 FIBINQ8TAL6 211 aa19■□□□□ 0.63
UPK3BP1-201ENST00000428678 ADAM32Q8TC27 787 aa19■□□□□ 0.63
UPK3BP1-201ENST00000428678 KCTD13Q8WZ19 329 aa19■□□□□ 0.63
UPK3BP1-201ENST00000428678 LMLNQ96KR4 655 aa19■□□□□ 0.63
UPK3BP1-201ENST00000428678 IRX2Q9BZI1 471 aaPredicted RBP19■□□□□ 0.63
UPK3BP1-201ENST00000428678 EBF2Q9HAK2 575 aa19■□□□□ 0.63
UPK3BP1-201ENST00000428678 GDF3Q9NR23 364 aa19■□□□□ 0.63
UPK3BP1-201ENST00000428678 AK5Q9Y6K8 562 aa19■□□□□ 0.63
UPK3BP1-201ENST00000428678 ARID1BQ8NFD5 2236 aaPredicted RBP19■□□□□ 0.63
UPK3BP1-201ENST00000428678 MGAQ8IWI9 3026 aa18.99■□□□□ 0.63
UPK3BP1-201ENST00000428678 C1SP09871 688 aa18.99■□□□□ 0.63
UPK3BP1-201ENST00000428678 VDRP11473 427 aa18.99■□□□□ 0.63
UPK3BP1-201ENST00000428678 CDK4P11802 303 aa18.99■□□□□ 0.63
UPK3BP1-201ENST00000428678 RPS24P62847 133 aaKnown RBP18.99■□□□□ 0.63
UPK3BP1-201ENST00000428678 C19orf57Q0VDD7 668 aa18.99■□□□□ 0.63
UPK3BP1-201ENST00000428678 CDH18Q13634 790 aa18.99■□□□□ 0.63
UPK3BP1-201ENST00000428678 KCNJ12Q14500 433 aa18.99■□□□□ 0.63
UPK3BP1-201ENST00000428678 SHBQ15464 509 aa18.99■□□□□ 0.63
UPK3BP1-201ENST00000428678 C9orf64Q5T6V5 341 aa18.99■□□□□ 0.63
UPK3BP1-201ENST00000428678 HES3Q5TGS1 186 aa18.99■□□□□ 0.63
UPK3BP1-201ENST00000428678 CCDC117Q8IWD4 279 aaPredicted RBP18.99■□□□□ 0.63
UPK3BP1-201ENST00000428678 SCML4Q8N228 414 aa18.99■□□□□ 0.63
UPK3BP1-201ENST00000428678 SAP25Q8TEE9 199 aa18.99■□□□□ 0.63
UPK3BP1-201ENST00000428678 MRGPRX3Q96LB0 322 aa18.99■□□□□ 0.63
UPK3BP1-201ENST00000428678 SPATA32Q96LK8 384 aa18.99■□□□□ 0.63
UPK3BP1-201ENST00000428678 PRICKLE1Q96MT3 831 aaPredicted RBP18.99■□□□□ 0.63
UPK3BP1-201ENST00000428678 DDX50Q9BQ39 737 aaKnown RBP18.99■□□□□ 0.63
UPK3BP1-201ENST00000428678 INTS6Q9UL03 887 aaKnown RBP18.99■□□□□ 0.63
UPK3BP1-201ENST00000428678 FZD4Q9ULV1 537 aa18.99■□□□□ 0.63
UPK3BP1-201ENST00000428678 CEP83Q9Y592 693 aa18.99■□□□□ 0.63
UPK3BP1-201ENST00000428678 MYLKQ15746 1914 aa18.99■□□□□ 0.63
UPK3BP1-201ENST00000428678 TTC34A8MYJ7 566 aa18.98■□□□□ 0.63
UPK3BP1-201ENST00000428678 WNT9AO14904 365 aa18.98■□□□□ 0.63
UPK3BP1-201ENST00000428678 YKT6O15498 198 aa18.98■□□□□ 0.63
UPK3BP1-201ENST00000428678 LTFP02788 710 aa18.98■□□□□ 0.63
UPK3BP1-201ENST00000428678 SLC8A1P32418 973 aa18.98■□□□□ 0.63
UPK3BP1-201ENST00000428678 PSMD8P48556 350 aa18.98■□□□□ 0.63
UPK3BP1-201ENST00000428678 ARRB1P49407 418 aaPredicted RBP18.98■□□□□ 0.63
UPK3BP1-201ENST00000428678 ACADVLP49748 655 aa18.98■□□□□ 0.63
UPK3BP1-201ENST00000428678 LRMPQ12912 555 aa18.98■□□□□ 0.63
UPK3BP1-201ENST00000428678 TARDBPQ13148 414 aaKnown RBP eCLIP18.98■□□□□ 0.63
UPK3BP1-201ENST00000428678 NADSYN1Q6IA69 706 aa18.98■□□□□ 0.63
UPK3BP1-201ENST00000428678 MMS22LQ6ZRQ5 1243 aa18.98■□□□□ 0.63
UPK3BP1-201ENST00000428678 HSCBQ8IWL3 235 aa18.98■□□□□ 0.63
UPK3BP1-201ENST00000428678 SMYD4Q8IYR2 804 aaPredicted RBP18.98■□□□□ 0.63
UPK3BP1-201ENST00000428678 IRGQQ8WZA9 623 aa18.98■□□□□ 0.63
UPK3BP1-201ENST00000428678 SNX21Q969T3 373 aa18.98■□□□□ 0.63
UPK3BP1-201ENST00000428678 MYEOVQ96EZ4 313 aa18.98■□□□□ 0.63
UPK3BP1-201ENST00000428678 SERAC1Q96JX3 654 aa18.98■□□□□ 0.63
UPK3BP1-201ENST00000428678 ADAMTS1Q9UHI8 967 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms