RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 KIAA0895LQ68EN5 471 aa17.18■□□□□ 0.34
VARS-216ENST00000428445 DHRS13Q6UX07 377 aa17.18■□□□□ 0.34
VARS-216ENST00000428445 RRAGAQ7L523 313 aa17.18■□□□□ 0.34
VARS-216ENST00000428445 ADAT2Q7Z6V5 191 aaKnown RBP17.18■□□□□ 0.34
VARS-216ENST00000428445 MFN1Q8IWA4 741 aa17.18■□□□□ 0.34
VARS-216ENST00000428445 FMR1NBQ8N0W7 255 aaPredicted RBP17.18■□□□□ 0.34
VARS-216ENST00000428445 CRELD1Q96HD1 420 aa17.18■□□□□ 0.34
VARS-216ENST00000428445 FCRL2Q96LA5 508 aaPredicted RBP17.18■□□□□ 0.34
VARS-216ENST00000428445 MRGPRX3Q96LB0 322 aa17.18■□□□□ 0.34
VARS-216ENST00000428445 TSG101Q99816 390 aa17.18■□□□□ 0.34
VARS-216ENST00000428445 RSPH9Q9H1X1 276 aaPredicted RBP17.18■□□□□ 0.34
VARS-216ENST00000428445 NEUROG2Q9H2A3 272 aa17.18■□□□□ 0.34
VARS-216ENST00000428445 FBXL12Q9NXK8 326 aa17.18■□□□□ 0.34
VARS-216ENST00000428445 ARMCX3Q9UH62 379 aaPredicted RBP17.18■□□□□ 0.34
VARS-216ENST00000428445 NAALADL1Q9UQQ1 740 aa17.18■□□□□ 0.34
VARS-216ENST00000428445 DOCK9Q9BZ29 2069 aa17.17■□□□□ 0.34
VARS-216ENST00000428445 TTC34A8MYJ7 566 aa17.17■□□□□ 0.34
VARS-216ENST00000428445 SLC16A3O15427 465 aaKnown RBP17.17■□□□□ 0.34
VARS-216ENST00000428445 MOCS2O96007 188 aaPredicted RBP17.17■□□□□ 0.34
VARS-216ENST00000428445 C7P10643 843 aa17.17■□□□□ 0.34
VARS-216ENST00000428445 GRIA4P48058 902 aa17.17■□□□□ 0.34
VARS-216ENST00000428445 SLC11A2P49281 568 aa17.17■□□□□ 0.34
VARS-216ENST00000428445 FMO5P49326 533 aa17.17■□□□□ 0.34
VARS-216ENST00000428445 GALCP54803 685 aa17.17■□□□□ 0.34
VARS-216ENST00000428445 ZNF445P59923 1031 aa17.17■□□□□ 0.34
VARS-216ENST00000428445 YWHAEP62258 255 aaKnown RBP17.17■□□□□ 0.34
VARS-216ENST00000428445 ACAP1Q15027 740 aa17.17■□□□□ 0.34
VARS-216ENST00000428445 CNGA2Q16280 664 aa17.17■□□□□ 0.34
VARS-216ENST00000428445 COBLL1Q53SF7 1204 aa17.17■□□□□ 0.34
VARS-216ENST00000428445 NCEH1Q6PIU2 408 aa17.17■□□□□ 0.34
VARS-216ENST00000428445 MMAAQ8IVH4 418 aaKnown RBP17.17■□□□□ 0.34
VARS-216ENST00000428445 ARHGEF19Q8IW93 802 aa17.17■□□□□ 0.34
VARS-216ENST00000428445 UNC45BQ8IWX7 931 aa17.17■□□□□ 0.34
VARS-216ENST00000428445 SCUBE3Q8IX30 993 aa17.17■□□□□ 0.34
VARS-216ENST00000428445 SCML4Q8N228 414 aa17.17■□□□□ 0.34
VARS-216ENST00000428445 FIBINQ8TAL6 211 aa17.17■□□□□ 0.34
VARS-216ENST00000428445 IGSF8Q969P0 613 aa17.17■□□□□ 0.34
VARS-216ENST00000428445 TTC17Q96AE7 1141 aa17.17■□□□□ 0.34
VARS-216ENST00000428445 LRIG1Q96JA1 1093 aa17.17■□□□□ 0.34
VARS-216ENST00000428445 PABPC3Q9H361 631 aaKnown RBP17.17■□□□□ 0.34
VARS-216ENST00000428445 SGK2Q9HBY8 427 aa17.17■□□□□ 0.34
VARS-216ENST00000428445 SLCO3A1Q9UIG8 710 aa17.17■□□□□ 0.34
VARS-216ENST00000428445 KIAA1257Q9ULG3 409 aa17.17■□□□□ 0.34
VARS-216ENST00000428445 SMG1Q96Q15 3661 aaKnown RBP17.16■□□□□ 0.34
VARS-216ENST00000428445 TNFSF14O43557 240 aa17.16■□□□□ 0.34
VARS-216ENST00000428445 CD44P16070 742 aaKnown RBP17.16■□□□□ 0.34
VARS-216ENST00000428445 CCT8P50990 548 aa17.16■□□□□ 0.34
VARS-216ENST00000428445 ZBTB16Q05516 673 aa17.16■□□□□ 0.34
VARS-216ENST00000428445 CAMK2BQ13554 666 aa17.16■□□□□ 0.34
VARS-216ENST00000428445 TTC31Q49AM3 519 aaPredicted RBP17.16■□□□□ 0.34
VARS-216ENST00000428445 C9orf64Q5T6V5 341 aa17.16■□□□□ 0.34
VARS-216ENST00000428445 SYPL2Q5VXT5 272 aa17.16■□□□□ 0.34
VARS-216ENST00000428445 APCDD1Q8J025 514 aa17.16■□□□□ 0.34
VARS-216ENST00000428445 PPM1KQ8N3J5 372 aa17.16■□□□□ 0.34
VARS-216ENST00000428445 DQX1Q8TE96 717 aaKnown RBP17.16■□□□□ 0.34
VARS-216ENST00000428445 IRGQQ8WZA9 623 aa17.16■□□□□ 0.34
VARS-216ENST00000428445 RPL10LQ96L21 214 aaKnown RBP17.16■□□□□ 0.34
VARS-216ENST00000428445 BBC3Q96PG8 261 aaPredicted RBP17.16■□□□□ 0.34
VARS-216ENST00000428445 OSGEPQ9NPF4 335 aa17.16■□□□□ 0.34
VARS-216ENST00000428445 RMND1Q9NWS8 449 aa17.16■□□□□ 0.34
VARS-216ENST00000428445 ERVW-1Q9UQF0 538 aa17.16■□□□□ 0.34
VARS-216ENST00000428445 NCKAP1Q9Y2A7 1128 aa17.16■□□□□ 0.34
VARS-216ENST00000428445 PLK4O00444 970 aa17.15■□□□□ 0.34
VARS-216ENST00000428445 RNASEH2AO75792 299 aaKnown RBP17.15■□□□□ 0.34
VARS-216ENST00000428445 PAEPP09466 180 aa17.15■□□□□ 0.34
VARS-216ENST00000428445 VAV1P15498 845 aa17.15■□□□□ 0.34
VARS-216ENST00000428445 TBXAS1P24557 533 aaPredicted RBP17.15■□□□□ 0.34
VARS-216ENST00000428445 GRK6P43250 576 aa17.15■□□□□ 0.34
VARS-216ENST00000428445 ST8SIA6P61647 398 aa17.15■□□□□ 0.34
VARS-216ENST00000428445 KCNJ12Q14500 433 aa17.15■□□□□ 0.34
VARS-216ENST00000428445 SHBQ15464 509 aa17.15■□□□□ 0.34
VARS-216ENST00000428445 CST6Q15828 149 aa17.15■□□□□ 0.34
VARS-216ENST00000428445 HNRNPA1L2Q32P51 320 aaKnown RBP17.15■□□□□ 0.34
VARS-216ENST00000428445 DCAF6Q58WW2 860 aa17.15■□□□□ 0.34
VARS-216ENST00000428445 MS4A13Q5J8X5 152 aa17.15■□□□□ 0.34
VARS-216ENST00000428445 PITRM1Q5JRX3 1037 aa17.15■□□□□ 0.34
VARS-216ENST00000428445 MPP7Q5T2T1 576 aa17.15■□□□□ 0.34
VARS-216ENST00000428445 NUGGCQ68CJ6 796 aa17.15■□□□□ 0.34
VARS-216ENST00000428445 HJURPQ8NCD3 748 aaPredicted RBP17.15■□□□□ 0.34
VARS-216ENST00000428445 LMO3Q8TAP4 145 aa17.15■□□□□ 0.34
VARS-216ENST00000428445 NT5C1BQ96P26 610 aa17.15■□□□□ 0.34
VARS-216ENST00000428445 FAM129BQ96TA1 746 aa17.15■□□□□ 0.34
VARS-216ENST00000428445 ASXL3Q9C0F0 2248 aa17.15■□□□□ 0.34
VARS-216ENST00000428445 A0A1W2PPC4 97 aa17.14■□□□□ 0.33
VARS-216ENST00000428445 IRAK2O43187 625 aa17.14■□□□□ 0.33
VARS-216ENST00000428445 PCDHGA12O60330 932 aa17.14■□□□□ 0.33
VARS-216ENST00000428445 SLC8A1P32418 973 aa17.14■□□□□ 0.33
VARS-216ENST00000428445 PSMD8P48556 350 aa17.14■□□□□ 0.33
VARS-216ENST00000428445 STK19P49842 368 aaPredicted RBP17.14■□□□□ 0.33
VARS-216ENST00000428445 METAP1P53582 386 aa17.14■□□□□ 0.33
VARS-216ENST00000428445 C21orf59P57076 290 aa17.14■□□□□ 0.33
VARS-216ENST00000428445 PITX1P78337 314 aaPredicted RBP17.14■□□□□ 0.33
VARS-216ENST00000428445 DNAJC3Q13217 504 aa17.14■□□□□ 0.33
VARS-216ENST00000428445 RAP1GAP2Q684P5 730 aa17.14■□□□□ 0.33
VARS-216ENST00000428445 DENND1BQ6P3S1 775 aa17.14■□□□□ 0.33
VARS-216ENST00000428445 TAC4Q86UU9 113 aa17.14■□□□□ 0.33
VARS-216ENST00000428445 CIR1Q86X95 450 aaPredicted RBP17.14■□□□□ 0.33
VARS-216ENST00000428445 LGI2Q8N0V4 545 aa17.14■□□□□ 0.33
VARS-216ENST00000428445 STK40Q8N2I9 435 aa17.14■□□□□ 0.33
VARS-216ENST00000428445 AADATQ8N5Z0 425 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms