RNA–Protein interactions for RNA: ENST00000428101.6

LMO1-202, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LMO1, Length 1,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-202ENST00000428101 SLC47A2Q86VL8 602 aa28.19■■■□□ 2.1
LMO1-202ENST00000428101 FAM114A1Q8IWE2 563 aa28.19■■■□□ 2.1
LMO1-202ENST00000428101 DEFB106AQ8N104 65 aa28.19■■■□□ 2.1
LMO1-202ENST00000428101 MRGPRX3Q96LB0 322 aa28.19■■■□□ 2.1
LMO1-202ENST00000428101 NDST4Q9H3R1 872 aa28.19■■■□□ 2.1
LMO1-202ENST00000428101 ASNSD1Q9NWL6 643 aa28.19■■■□□ 2.1
LMO1-202ENST00000428101 KMT2BQ9UMN6 2715 aaPredicted RBP28.18■■■□□ 2.1
LMO1-202ENST00000428101 A0A1B0GTW7 788 aa28.18■■■□□ 2.1
LMO1-202ENST00000428101 KCNU1A8MYU2 1149 aa28.18■■■□□ 2.1
LMO1-202ENST00000428101 GJB3O75712 270 aa28.18■■■□□ 2.1
LMO1-202ENST00000428101 ERCC5P28715 1186 aaPredicted RBP28.18■■■□□ 2.1
LMO1-202ENST00000428101 ACSL1P33121 698 aa28.18■■■□□ 2.1
LMO1-202ENST00000428101 HSP90AA4PQ58FG1 418 aa28.18■■■□□ 2.1
LMO1-202ENST00000428101 ZCCHC9Q8N567 271 aaKnown RBP28.18■■■□□ 2.1
LMO1-202ENST00000428101 C1orf131Q8NDD1 294 aaKnown RBP28.18■■■□□ 2.1
LMO1-202ENST00000428101 C1orf216Q8TAB5 229 aa28.18■■■□□ 2.1
LMO1-202ENST00000428101 PRMT1Q99873 361 aaKnown RBP28.18■■■□□ 2.1
LMO1-202ENST00000428101 TUBGCP2Q9BSJ2 902 aa28.18■■■□□ 2.1
LMO1-202ENST00000428101 MIR1-1HGQ9H1L0 117 aa28.18■■■□□ 2.1
LMO1-202ENST00000428101 SLC32A1Q9H598 525 aa28.18■■■□□ 2.1
LMO1-202ENST00000428101 SLTMQ9NWH9 1034 aaKnown RBP eCLIP28.18■■■□□ 2.1
LMO1-202ENST00000428101 KNL1Q8NG31 2342 aa28.17■■■□□ 2.1
LMO1-202ENST00000428101 GRAP2O75791 330 aa28.17■■■□□ 2.1
LMO1-202ENST00000428101 ASLP04424 464 aa28.17■■■□□ 2.1
LMO1-202ENST00000428101 ERBB2P04626 1255 aa28.17■■■□□ 2.1
LMO1-202ENST00000428101 CD59P13987 128 aa28.17■■■□□ 2.1
LMO1-202ENST00000428101 CDK17Q00537 523 aa28.17■■■□□ 2.1
LMO1-202ENST00000428101 ZBTB16Q05516 673 aa28.17■■■□□ 2.1
LMO1-202ENST00000428101 GRIK2Q13002 908 aa28.17■■■□□ 2.1
LMO1-202ENST00000428101 PITRM1Q5JRX3 1037 aa28.17■■■□□ 2.1
LMO1-202ENST00000428101 FAM183BPQ6ZVS7 135 aa28.17■■■□□ 2.1
LMO1-202ENST00000428101 CHSY1Q86X52 802 aa28.17■■■□□ 2.1
LMO1-202ENST00000428101 FAM71AQ8IYT1 594 aa28.17■■■□□ 2.1
LMO1-202ENST00000428101 ATP6V0D2Q8N8Y2 350 aa28.17■■■□□ 2.1
LMO1-202ENST00000428101 PCED1AQ9H1Q7 454 aa28.17■■■□□ 2.1
LMO1-202ENST00000428101 C6orf106Q9H6K1 298 aaPredicted RBP28.17■■■□□ 2.1
LMO1-202ENST00000428101 FRYQ5TBA9 3013 aa28.17■■■□□ 2.1
LMO1-202ENST00000428101 HSF2BPO75031 334 aa28.16■■■□□ 2.1
LMO1-202ENST00000428101 PRKCSHP14314 528 aaPredicted RBP28.16■■■□□ 2.1
LMO1-202ENST00000428101 CTSOP43234 321 aaPredicted RBP28.16■■■□□ 2.1
LMO1-202ENST00000428101 KCNMA1Q12791 1236 aa28.16■■■□□ 2.1
LMO1-202ENST00000428101 FOXC1Q12948 553 aa28.16■■■□□ 2.1
LMO1-202ENST00000428101 EFHC1Q5JVL4 640 aa28.16■■■□□ 2.1
LMO1-202ENST00000428101 OLFML1Q6UWY5 402 aa28.16■■■□□ 2.1
LMO1-202ENST00000428101 C11orf57Q6ZUT1 292 aaPredicted RBP28.16■■■□□ 2.1
LMO1-202ENST00000428101 CCDC117Q8IWD4 279 aaPredicted RBP28.16■■■□□ 2.1
LMO1-202ENST00000428101 NUP62CLQ9H1M0 184 aa28.16■■■□□ 2.1
LMO1-202ENST00000428101 RSPH9Q9H1X1 276 aaPredicted RBP28.16■■■□□ 2.1
LMO1-202ENST00000428101 FAM204AQ9H8W3 233 aa28.16■■■□□ 2.1
LMO1-202ENST00000428101 DDIT4Q9NX09 232 aa28.16■■■□□ 2.1
LMO1-202ENST00000428101 KIAA1522Q9P206 1035 aaPredicted RBP28.16■■■□□ 2.1
LMO1-202ENST00000428101 EIF2B4Q9UI10 523 aaKnown RBP28.16■■■□□ 2.1
LMO1-202ENST00000428101 ERVW-1Q9UQF0 538 aa28.16■■■□□ 2.1
LMO1-202ENST00000428101 CEP295Q9C0D2 2601 aa28.15■■■□□ 2.1
LMO1-202ENST00000428101 H0Y626 953 aa28.15■■■□□ 2.1
LMO1-202ENST00000428101 BCAT2O15382 392 aaPredicted RBP28.15■■■□□ 2.1
LMO1-202ENST00000428101 TOP3BO95985 862 aaKnown RBP28.15■■■□□ 2.1
LMO1-202ENST00000428101 KRT9P35527 623 aa28.15■■■□□ 2.1
LMO1-202ENST00000428101 ST8SIA6P61647 398 aa28.15■■■□□ 2.1
LMO1-202ENST00000428101 ARID5BQ14865 1188 aa28.15■■■□□ 2.1
LMO1-202ENST00000428101 HNRNPA1L2Q32P51 320 aaKnown RBP28.15■■■□□ 2.1
LMO1-202ENST00000428101 PTPN20Q4JDL3 420 aa28.15■■■□□ 2.1
LMO1-202ENST00000428101 ZNF776Q68DI1 518 aaPredicted RBP28.15■■■□□ 2.1
LMO1-202ENST00000428101 OR6B2Q6IFH4 312 aa28.15■■■□□ 2.1
LMO1-202ENST00000428101 APCDD1Q8J025 514 aa28.15■■■□□ 2.1
LMO1-202ENST00000428101 KDM1BQ8NB78 822 aa28.15■■■□□ 2.1
LMO1-202ENST00000428101 NOX5Q96PH1 765 aa28.15■■■□□ 2.1
LMO1-202ENST00000428101 ZDHHC5Q9C0B5 715 aa28.15■■■□□ 2.1
LMO1-202ENST00000428101 PLCB1Q9NQ66 1216 aa28.15■■■□□ 2.1
LMO1-202ENST00000428101 SLC12A6Q9UHW9 1150 aa28.15■■■□□ 2.1
LMO1-202ENST00000428101 SLCO1B1Q9Y6L6 691 aa28.15■■■□□ 2.1
LMO1-202ENST00000428101 SYNJ2BP-COX16A0A087WUM0 186 aa28.14■■■□□ 2.1
LMO1-202ENST00000428101 F5H5T6 163 aa28.14■■■□□ 2.1
LMO1-202ENST00000428101 SIN3BO75182 1162 aa28.14■■■□□ 2.1
LMO1-202ENST00000428101 DNTTP04053 509 aa28.14■■■□□ 2.1
LMO1-202ENST00000428101 SLC2A3P11169 496 aa28.14■■■□□ 2.1
LMO1-202ENST00000428101 BTBD1Q9H0C5 482 aa28.14■■■□□ 2.1
LMO1-202ENST00000428101 SAMSN1Q9NSI8 373 aaKnown RBP28.14■■■□□ 2.1
LMO1-202ENST00000428101 COX16Q9P0S2 106 aa28.14■■■□□ 2.1
LMO1-202ENST00000428101 DACH1Q9UI36 760 aa28.14■■■□□ 2.1
LMO1-202ENST00000428101 SPAARA0A1B0GVQ0 90 aa28.13■■■□□ 2.09
LMO1-202ENST00000428101 SRPRAP08240 638 aaKnown RBP28.13■■■□□ 2.09
LMO1-202ENST00000428101 CCR1P32246 355 aa28.13■■■□□ 2.09
LMO1-202ENST00000428101 FAM193AP78312 1265 aa28.13■■■□□ 2.09
LMO1-202ENST00000428101 BNC1Q01954 994 aa28.13■■■□□ 2.09
LMO1-202ENST00000428101 SLC6A3Q01959 620 aa28.13■■■□□ 2.09
LMO1-202ENST00000428101 SLC14A1Q13336 389 aa28.13■■■□□ 2.09
LMO1-202ENST00000428101 DRAP1Q14919 205 aaPredicted RBP28.13■■■□□ 2.09
LMO1-202ENST00000428101 ST3GAL2Q16842 350 aa28.13■■■□□ 2.09
LMO1-202ENST00000428101 C9orf64Q5T6V5 341 aa28.13■■■□□ 2.09
LMO1-202ENST00000428101 CLEC17AQ6ZS10 378 aa28.13■■■□□ 2.09
LMO1-202ENST00000428101 CIR1Q86X95 450 aaPredicted RBP28.13■■■□□ 2.09
LMO1-202ENST00000428101 DHX40Q8IX18 779 aaKnown RBP28.13■■■□□ 2.09
LMO1-202ENST00000428101 SLCO3A1Q9UIG8 710 aa28.13■■■□□ 2.09
LMO1-202ENST00000428101 ZBTB32Q9Y2Y4 487 aaPredicted RBP28.13■■■□□ 2.09
LMO1-202ENST00000428101 FHOD1Q9Y613 1164 aa28.13■■■□□ 2.09
LMO1-202ENST00000428101 SPEGQ15772 3267 aa28.13■■■□□ 2.09
LMO1-202ENST00000428101 TTC34A8MYJ7 566 aa28.12■■■□□ 2.09
LMO1-202ENST00000428101 MOCS3O95396 460 aa28.12■■■□□ 2.09
LMO1-202ENST00000428101 SEMA4FO95754 770 aa28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms