RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 TMEM121Q9BTD3 319 aa12.44□□□□□ -0.42
RFC4-206ENST00000427785 PARD6BQ9BYG5 372 aa12.44□□□□□ -0.42
RFC4-206ENST00000427785 DZANK1Q9NVP4 752 aa12.44□□□□□ -0.42
RFC4-206ENST00000427785 TMEM51Q9NW97 253 aa12.44□□□□□ -0.42
RFC4-206ENST00000427785 DTLQ9NZJ0 730 aa12.44□□□□□ -0.42
RFC4-206ENST00000427785 CFAP97Q9P2B7 532 aa12.44□□□□□ -0.42
RFC4-206ENST00000427785 ZNF148Q9UQR1 794 aa12.44□□□□□ -0.42
RFC4-206ENST00000427785 COL4A3Q01955 1670 aa12.44□□□□□ -0.42
RFC4-206ENST00000427785 TRANK1O15050 2925 aa12.44□□□□□ -0.42
RFC4-206ENST00000427785 MYLKQ15746 1914 aa12.43□□□□□ -0.42
RFC4-206ENST00000427785 F5H5T6 163 aa12.43□□□□□ -0.42
RFC4-206ENST00000427785 SGK1O00141 431 aa12.43□□□□□ -0.42
RFC4-206ENST00000427785 TRDMT1O14717 391 aaKnown RBP12.43□□□□□ -0.42
RFC4-206ENST00000427785 FGF10O15520 208 aaPredicted RBP12.43□□□□□ -0.42
RFC4-206ENST00000427785 PRAMEF12O95522 483 aa12.43□□□□□ -0.42
RFC4-206ENST00000427785 GAS8O95995 478 aa12.43□□□□□ -0.42
RFC4-206ENST00000427785 HTR7P34969 479 aa12.43□□□□□ -0.42
RFC4-206ENST00000427785 HCAR3P49019 387 aa12.43□□□□□ -0.42
RFC4-206ENST00000427785 SLC11A2P49281 568 aa12.43□□□□□ -0.42
RFC4-206ENST00000427785 NRLP54845 237 aa12.43□□□□□ -0.42
RFC4-206ENST00000427785 TUBB4BP68371 445 aa12.43□□□□□ -0.42
RFC4-206ENST00000427785 SLC7A9P82251 487 aa12.43□□□□□ -0.42
RFC4-206ENST00000427785 ZXDBP98169 803 aa12.43□□□□□ -0.42
RFC4-206ENST00000427785 PTK6Q13882 451 aa12.43□□□□□ -0.42
RFC4-206ENST00000427785 PAFAH1B3Q15102 231 aaKnown RBP12.43□□□□□ -0.42
RFC4-206ENST00000427785 TRADDQ15628 312 aa12.43□□□□□ -0.42
RFC4-206ENST00000427785 ALFQ53S48 1182 aa12.43□□□□□ -0.42
RFC4-206ENST00000427785 FAM182AQ5T1J6 154 aa12.43□□□□□ -0.42
RFC4-206ENST00000427785 FBXL22Q6P050 247 aa12.43□□□□□ -0.42
RFC4-206ENST00000427785 DRICH1Q6PGQ1 229 aaPredicted RBP12.43□□□□□ -0.42
RFC4-206ENST00000427785 DARS2Q6PI48 645 aaKnown RBP12.43□□□□□ -0.42
RFC4-206ENST00000427785 GSTA5Q7RTV2 222 aa12.43□□□□□ -0.42
RFC4-206ENST00000427785 MAATS1Q7Z4T9 603 aa12.43□□□□□ -0.42
RFC4-206ENST00000427785 TFAP2DQ7Z6R9 452 aa12.43□□□□□ -0.42
RFC4-206ENST00000427785 CDKL3Q8IVW4 592 aaPredicted RBP12.43□□□□□ -0.42
RFC4-206ENST00000427785 ALLCQ8N6M5 410 aa12.43□□□□□ -0.42
RFC4-206ENST00000427785 GLIS1Q8NBF1 620 aa12.43□□□□□ -0.42
RFC4-206ENST00000427785 LEMD2Q8NC56 503 aa12.43□□□□□ -0.42
RFC4-206ENST00000427785 DEPDC1BQ8WUY9 529 aa12.43□□□□□ -0.42
RFC4-206ENST00000427785 CASKIN2Q8WXE0 1202 aa12.43□□□□□ -0.42
RFC4-206ENST00000427785 SLCO2A1Q92959 643 aa12.43□□□□□ -0.42
RFC4-206ENST00000427785 IGSF8Q969P0 613 aa12.43□□□□□ -0.42
RFC4-206ENST00000427785 RPRD1AQ96P16 312 aaPredicted RBP12.43□□□□□ -0.42
RFC4-206ENST00000427785 OLFM3Q96PB7 478 aa12.43□□□□□ -0.42
RFC4-206ENST00000427785 QKIQ96PU8 341 aaKnown RBP eCLIP12.43□□□□□ -0.42
RFC4-206ENST00000427785 SLC46A2Q9BY10 475 aa12.43□□□□□ -0.42
RFC4-206ENST00000427785 FRMD8P1Q9BZ68 369 aaPredicted RBP12.43□□□□□ -0.42
RFC4-206ENST00000427785 EPB41L5Q9HCM4 733 aa12.43□□□□□ -0.42
RFC4-206ENST00000427785 ASIC3Q9UHC3 531 aa12.43□□□□□ -0.42
RFC4-206ENST00000427785 ANKRD36A6QL64 1941 aa12.43□□□□□ -0.42
RFC4-206ENST00000427785 LAMA3Q16787 3333 aa12.42□□□□□ -0.42
RFC4-206ENST00000427785 CNTN5O94779 1100 aa12.42□□□□□ -0.42
RFC4-206ENST00000427785 IFNB1P01574 187 aa12.42□□□□□ -0.42
RFC4-206ENST00000427785 ITGAVP06756 1048 aa12.42□□□□□ -0.42
RFC4-206ENST00000427785 ZSCAN5DPP0CG00 497 aa12.42□□□□□ -0.42
RFC4-206ENST00000427785 MYBL2P10244 700 aa12.42□□□□□ -0.42
RFC4-206ENST00000427785 ETS1P14921 441 aa12.42□□□□□ -0.42
RFC4-206ENST00000427785 VAV1P15498 845 aa12.42□□□□□ -0.42
RFC4-206ENST00000427785 SERPINB6P35237 376 aa12.42□□□□□ -0.42
RFC4-206ENST00000427785 SGSHP51688 502 aa12.42□□□□□ -0.42
RFC4-206ENST00000427785 MLLT6P55198 1093 aaPredicted RBP12.42□□□□□ -0.42
RFC4-206ENST00000427785 LRRC31Q6UY01 552 aa12.42□□□□□ -0.42
RFC4-206ENST00000427785 Q6ZNB5 142 aa12.42□□□□□ -0.42
RFC4-206ENST00000427785 DDX42Q86XP3 938 aaKnown RBP eCLIP12.42□□□□□ -0.42
RFC4-206ENST00000427785 EFHBQ8N7U6 833 aa12.42□□□□□ -0.42
RFC4-206ENST00000427785 RTL3Q8N8U3 475 aaKnown RBP12.42□□□□□ -0.42
RFC4-206ENST00000427785 FAM71DQ8N9W8 422 aa12.42□□□□□ -0.42
RFC4-206ENST00000427785 ATL2Q8NHH9 583 aa12.42□□□□□ -0.42
RFC4-206ENST00000427785 ITFG1Q8TB96 612 aa12.42□□□□□ -0.42
RFC4-206ENST00000427785 C1orf74Q96LT6 269 aa12.42□□□□□ -0.42
RFC4-206ENST00000427785 RAB17Q9H0T7 212 aa12.42□□□□□ -0.42
RFC4-206ENST00000427785 TTYH1Q9H313 450 aaPredicted RBP12.42□□□□□ -0.42
RFC4-206ENST00000427785 TASP1Q9H6P5 420 aa12.42□□□□□ -0.42
RFC4-206ENST00000427785 CATSPERBQ9H7T0 1116 aa12.42□□□□□ -0.42
RFC4-206ENST00000427785 PRDM16Q9HAZ2 1276 aa12.42□□□□□ -0.42
RFC4-206ENST00000427785 NDFIP2Q9NV92 336 aa12.42□□□□□ -0.42
RFC4-206ENST00000427785 AGO1Q9UL18 857 aaKnown RBP12.42□□□□□ -0.42
RFC4-206ENST00000427785 COLQQ9Y215 455 aaPredicted RBP12.42□□□□□ -0.42
RFC4-206ENST00000427785 CCL26Q9Y258 94 aa12.42□□□□□ -0.42
RFC4-206ENST00000427785 UTP11Q9Y3A2 253 aaKnown RBP12.42□□□□□ -0.42
RFC4-206ENST00000427785 MRPS23Q9Y3D9 190 aaKnown RBP12.42□□□□□ -0.42
RFC4-206ENST00000427785 SH3BP1Q9Y3L3 701 aa12.42□□□□□ -0.42
RFC4-206ENST00000427785 KIAA1549LQ6ZVL6 1849 aa12.41□□□□□ -0.42
RFC4-206ENST00000427785 IGLV3-10A0A075B6K4 115 aa12.41□□□□□ -0.42
RFC4-206ENST00000427785 BHMG1C9JSJ3 638 aaPredicted RBP12.41□□□□□ -0.42
RFC4-206ENST00000427785 DFFAO00273 331 aa12.41□□□□□ -0.42
RFC4-206ENST00000427785 LEFTY2O00292 366 aa12.41□□□□□ -0.42
RFC4-206ENST00000427785 KCNN4O15554 427 aa12.41□□□□□ -0.42
RFC4-206ENST00000427785 GREM1O60565 184 aa12.41□□□□□ -0.42
RFC4-206ENST00000427785 TSPAN3O60637 253 aa12.41□□□□□ -0.42
RFC4-206ENST00000427785 KRT14P02533 472 aa12.41□□□□□ -0.42
RFC4-206ENST00000427785 RHOQP17081 205 aa12.41□□□□□ -0.42
RFC4-206ENST00000427785 PFKLP17858 780 aa12.41□□□□□ -0.42
RFC4-206ENST00000427785 DDX6P26196 483 aaKnown RBP eCLIP12.41□□□□□ -0.42
RFC4-206ENST00000427785 RBL1P28749 1068 aa12.41□□□□□ -0.42
RFC4-206ENST00000427785 AVPR1AP37288 418 aa12.41□□□□□ -0.42
RFC4-206ENST00000427785 RPL21P46778 160 aaKnown RBP12.41□□□□□ -0.42
RFC4-206ENST00000427785 NR2C2P49116 596 aa12.41□□□□□ -0.42
RFC4-206ENST00000427785 RPS24P62847 133 aaKnown RBP12.41□□□□□ -0.42
RFC4-206ENST00000427785 MLLT1Q03111 559 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms