RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 TBC1D31Q96DN5 1066 aa27.36■■□□□ 1.97
SH3GL3-202ENST00000427482 CNOT10Q9H9A5 744 aaKnown RBP27.36■■□□□ 1.97
SH3GL3-202ENST00000427482 SEPT10Q9P0V9 454 aa27.36■■□□□ 1.97
SH3GL3-202ENST00000427482 CHMP2BQ9UQN3 213 aa27.36■■□□□ 1.97
SH3GL3-202ENST00000427482 FGF10O15520 208 aaPredicted RBP27.35■■□□□ 1.97
SH3GL3-202ENST00000427482 RAG1P15918 1043 aa27.35■■□□□ 1.97
SH3GL3-202ENST00000427482 GCAP28676 217 aa27.35■■□□□ 1.97
SH3GL3-202ENST00000427482 SSTR1P30872 391 aa27.35■■□□□ 1.97
SH3GL3-202ENST00000427482 GARSP41250 739 aaKnown RBP27.35■■□□□ 1.97
SH3GL3-202ENST00000427482 MMP13P45452 471 aa27.35■■□□□ 1.97
SH3GL3-202ENST00000427482 EFEMP1Q12805 493 aa27.35■■□□□ 1.97
SH3GL3-202ENST00000427482 TDRPQ86YL5 185 aa27.35■■□□□ 1.97
SH3GL3-202ENST00000427482 IGDCC3Q8IVU1 814 aa27.35■■□□□ 1.97
SH3GL3-202ENST00000427482 PALM2Q8IXS6 379 aa27.35■■□□□ 1.97
SH3GL3-202ENST00000427482 ZNF567Q8N184 647 aa27.35■■□□□ 1.97
SH3GL3-202ENST00000427482 GIPC2Q8TF65 315 aa27.35■■□□□ 1.97
SH3GL3-202ENST00000427482 CLSTN3Q9BQT9 956 aa27.35■■□□□ 1.97
SH3GL3-202ENST00000427482 TTLL2Q9BWV7 592 aa27.35■■□□□ 1.97
SH3GL3-202ENST00000427482 PPCSQ9HAB8 311 aa27.35■■□□□ 1.97
SH3GL3-202ENST00000427482 HS3ST4Q9Y661 456 aa27.35■■□□□ 1.97
SH3GL3-202ENST00000427482 C2CD2LO14523 706 aa27.34■■□□□ 1.97
SH3GL3-202ENST00000427482 AVILO75366 819 aa27.34■■□□□ 1.97
SH3GL3-202ENST00000427482 MOCS2O96007 188 aaPredicted RBP27.34■■□□□ 1.97
SH3GL3-202ENST00000427482 ZDHHC11BP0C7U3 371 aa27.34■■□□□ 1.97
SH3GL3-202ENST00000427482 DMTNQ08495 405 aa27.34■■□□□ 1.97
SH3GL3-202ENST00000427482 ZNF534Q76KX8 674 aa27.34■■□□□ 1.97
SH3GL3-202ENST00000427482 AGGF1Q8N302 714 aaeCLIP27.34■■□□□ 1.971e-7■□□□□ 9.2
SH3GL3-202ENST00000427482 TMEM169Q96HH4 297 aa27.34■■□□□ 1.97
SH3GL3-202ENST00000427482 C1orf74Q96LT6 269 aa27.34■■□□□ 1.97
SH3GL3-202ENST00000427482 HERC2P3Q9BVR0 1158 aa27.34■■□□□ 1.97
SH3GL3-202ENST00000427482 CATSPERBQ9H7T0 1116 aa27.34■■□□□ 1.97
SH3GL3-202ENST00000427482 RABGEF1Q9UJ41 708 aa27.34■■□□□ 1.97
SH3GL3-202ENST00000427482 MRPL42Q9Y6G3 142 aaKnown RBP27.34■■□□□ 1.97
SH3GL3-202ENST00000427482 LAG3P18627 525 aa27.34■■□□□ 1.97
SH3GL3-202ENST00000427482 MAGEA3P43357 314 aa27.34■■□□□ 1.97
SH3GL3-202ENST00000427482 TUFMP49411 452 aaKnown RBP27.34■■□□□ 1.97
SH3GL3-202ENST00000427482 DSG1Q02413 1049 aa27.34■■□□□ 1.97
SH3GL3-202ENST00000427482 BTG3Q14201 252 aaPredicted RBP27.34■■□□□ 1.97
SH3GL3-202ENST00000427482 TRIP4Q15650 581 aaPredicted RBP27.34■■□□□ 1.97
SH3GL3-202ENST00000427482 C3orf62Q6ZUJ4 267 aa27.34■■□□□ 1.97
SH3GL3-202ENST00000427482 TAOK1Q7L7X3 1001 aa27.34■■□□□ 1.97
SH3GL3-202ENST00000427482 EXOC3L1Q86VI1 746 aa27.34■■□□□ 1.97
SH3GL3-202ENST00000427482 TMEM199Q8N511 208 aa27.34■■□□□ 1.97
SH3GL3-202ENST00000427482 CEP41Q9BYV8 373 aa27.34■■□□□ 1.97
SH3GL3-202ENST00000427482 EIF2B3Q9NR50 452 aaKnown RBP27.34■■□□□ 1.97
SH3GL3-202ENST00000427482 IGSF9Q9P2J2 1179 aa27.34■■□□□ 1.97
SH3GL3-202ENST00000427482 AFF4Q9UHB7 1163 aaKnown RBP27.34■■□□□ 1.97
SH3GL3-202ENST00000427482 MTSS1O43312 755 aa27.33■■□□□ 1.97
SH3GL3-202ENST00000427482 PTPN3P26045 913 aa27.33■■□□□ 1.97
SH3GL3-202ENST00000427482 PARP6Q2NL67 630 aa27.33■■□□□ 1.97
SH3GL3-202ENST00000427482 ARHGEF2Q92974 986 aaKnown RBP27.33■■□□□ 1.97
SH3GL3-202ENST00000427482 FETUBQ9UGM5 382 aa27.33■■□□□ 1.97
SH3GL3-202ENST00000427482 E9PAM4 449 aa27.32■■□□□ 1.96
SH3GL3-202ENST00000427482 KCNK1O00180 336 aa27.32■■□□□ 1.96
SH3GL3-202ENST00000427482 TBX18O95935 607 aa27.32■■□□□ 1.96
SH3GL3-202ENST00000427482 ATP2A2P16615 1042 aaKnown RBP27.32■■□□□ 1.96
SH3GL3-202ENST00000427482 MLLT6P55198 1093 aaPredicted RBP27.32■■□□□ 1.96
SH3GL3-202ENST00000427482 CDK16Q00536 496 aa27.32■■□□□ 1.96
SH3GL3-202ENST00000427482 C10orf120Q5SQS8 335 aa27.32■■□□□ 1.96
SH3GL3-202ENST00000427482 PIK3R6Q5UE93 754 aa27.32■■□□□ 1.96
SH3GL3-202ENST00000427482 CYP4X1Q8N118 509 aa27.32■■□□□ 1.96
SH3GL3-202ENST00000427482 UBE2OQ9C0C9 1292 aaKnown RBP27.32■■□□□ 1.96
SH3GL3-202ENST00000427482 ACSS3Q9H6R3 686 aa27.32■■□□□ 1.96
SH3GL3-202ENST00000427482 XAB2Q9HCS7 855 aaKnown RBP27.32■■□□□ 1.96
SH3GL3-202ENST00000427482 MARCH2Q9P0N8 246 aa27.32■■□□□ 1.96
SH3GL3-202ENST00000427482 NYNRINQ9P2P1 1898 aaKnown RBP27.32■■□□□ 1.96
SH3GL3-202ENST00000427482 APOEP02649 317 aa27.32■■□□□ 1.96
SH3GL3-202ENST00000427482 ACRP10323 421 aa27.32■■□□□ 1.96
SH3GL3-202ENST00000427482 PSMB4P28070 264 aa27.32■■□□□ 1.96
SH3GL3-202ENST00000427482 C14orf80Q86SX3 495 aa27.32■■□□□ 1.96
SH3GL3-202ENST00000427482 DEPDC1BQ8WUY9 529 aa27.32■■□□□ 1.96
SH3GL3-202ENST00000427482 LRRC39Q96DD0 335 aa27.32■■□□□ 1.96
SH3GL3-202ENST00000427482 CELF6Q96J87 481 aaKnown RBP27.32■■□□□ 1.96
SH3GL3-202ENST00000427482 HSFX1Q9UBD0 423 aa27.32■■□□□ 1.96
SH3GL3-202ENST00000427482 SLC24A2Q9UI40 661 aa27.32■■□□□ 1.96
SH3GL3-202ENST00000427482 POC1B-GALNT4F8VUJ3 575 aa27.31■■□□□ 1.96
SH3GL3-202ENST00000427482 SPAG6O75602 509 aa27.31■■□□□ 1.96
SH3GL3-202ENST00000427482 BAIAP3O94812 1187 aa27.31■■□□□ 1.96
SH3GL3-202ENST00000427482 ABLIM3O94929 683 aa27.31■■□□□ 1.96
SH3GL3-202ENST00000427482 TUBP50607 506 aa27.31■■□□□ 1.96
SH3GL3-202ENST00000427482 COG7P83436 770 aa27.31■■□□□ 1.96
SH3GL3-202ENST00000427482 ZNF33AQ06730 810 aa27.31■■□□□ 1.96
SH3GL3-202ENST00000427482 RASA2Q15283 850 aa27.31■■□□□ 1.96
SH3GL3-202ENST00000427482 ARHGAP12Q8IWW6 846 aa27.31■■□□□ 1.96
SH3GL3-202ENST00000427482 LZTR1Q8N653 840 aa27.31■■□□□ 1.96
SH3GL3-202ENST00000427482 ZNF461Q8TAF7 563 aa27.31■■□□□ 1.96
SH3GL3-202ENST00000427482 FBF1Q8TES7 1133 aa27.31■■□□□ 1.96
SH3GL3-202ENST00000427482 DPF3Q92784 378 aa27.31■■□□□ 1.96
SH3GL3-202ENST00000427482 SELENOSQ9BQE4 189 aa27.31■■□□□ 1.96
SH3GL3-202ENST00000427482 SPG21Q9NZD8 308 aa27.31■■□□□ 1.96
SH3GL3-202ENST00000427482 KLHL8Q9P2G9 620 aaPredicted RBP27.31■■□□□ 1.96
SH3GL3-202ENST00000427482 TBK1Q9UHD2 729 aa27.31■■□□□ 1.96
SH3GL3-202ENST00000427482 MAGED2Q9UNF1 606 aaPredicted RBP27.31■■□□□ 1.96
SH3GL3-202ENST00000427482 CARNS1A5YM72 827 aa27.3■■□□□ 1.96
SH3GL3-202ENST00000427482 SEC24AO95486 1093 aa27.3■■□□□ 1.96
SH3GL3-202ENST00000427482 IGLV3-27P01718 113 aa27.3■■□□□ 1.96
SH3GL3-202ENST00000427482 LSP1P33241 339 aa27.3■■□□□ 1.96
SH3GL3-202ENST00000427482 LBX1P52954 281 aa27.3■■□□□ 1.96
SH3GL3-202ENST00000427482 KLHL38Q2WGJ6 581 aa27.3■■□□□ 1.96
SH3GL3-202ENST00000427482 TPGS2Q68CL5 300 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms