RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 PNMA2Q9UL42 364 aa5.58□□□□□ -1.52
LINC00458-202ENST00000427299 PAXBP1Q9Y5B6 917 aa5.58□□□□□ -1.52
LINC00458-202ENST00000427299 RREB1Q92766 1687 aa5.58□□□□□ -1.52
LINC00458-202ENST00000427299 CICQ96RK0 1608 aaPredicted RBP5.58□□□□□ -1.52
LINC00458-202ENST00000427299 FNDC1Q4ZHG4 1894 aaPredicted RBP5.58□□□□□ -1.52
LINC00458-202ENST00000427299 C1orf167Q5SNV9 1468 aa5.58□□□□□ -1.52
LINC00458-202ENST00000427299 NUP98P52948 1817 aa5.58□□□□□ -1.52
LINC00458-202ENST00000427299 A0A0D9SFI3 127 aa5.57□□□□□ -1.52
LINC00458-202ENST00000427299 DHX16O60231 1041 aaKnown RBP5.57□□□□□ -1.52
LINC00458-202ENST00000427299 CBSLP0DN79 551 aa5.57□□□□□ -1.52
LINC00458-202ENST00000427299 KITP10721 976 aa5.57□□□□□ -1.52
LINC00458-202ENST00000427299 CBSP35520 551 aa5.57□□□□□ -1.52
LINC00458-202ENST00000427299 SOX8P57073 446 aa5.57□□□□□ -1.52
LINC00458-202ENST00000427299 HOXA4Q00056 320 aaPredicted RBP5.57□□□□□ -1.52
LINC00458-202ENST00000427299 RAPGEF1Q13905 1077 aa5.57□□□□□ -1.52
LINC00458-202ENST00000427299 CNGA2Q16280 664 aa5.57□□□□□ -1.52
LINC00458-202ENST00000427299 TMEM95Q3KNT9 176 aa5.57□□□□□ -1.52
LINC00458-202ENST00000427299 ZNF260Q3ZCT1 412 aa5.57□□□□□ -1.52
LINC00458-202ENST00000427299 ICE2Q659A1 982 aa5.57□□□□□ -1.52
LINC00458-202ENST00000427299 RUSC1-AS1Q66K80 236 aa5.57□□□□□ -1.52
LINC00458-202ENST00000427299 NAPRTQ6XQN6 538 aa5.57□□□□□ -1.52
LINC00458-202ENST00000427299 SESTD1Q86VW0 696 aa5.57□□□□□ -1.52
LINC00458-202ENST00000427299 CREBRFQ8IUR6 639 aa5.57□□□□□ -1.52
LINC00458-202ENST00000427299 SAMD14Q8IZD0 417 aaPredicted RBP5.57□□□□□ -1.52
LINC00458-202ENST00000427299 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.57□□□□□ -1.52
LINC00458-202ENST00000427299 CCDC150Q8NCX0 1101 aa5.57□□□□□ -1.52
LINC00458-202ENST00000427299 CYP2W1Q8TAV3 490 aa5.57□□□□□ -1.52
LINC00458-202ENST00000427299 SUCLG2Q96I99 432 aa5.57□□□□□ -1.52
LINC00458-202ENST00000427299 RITA1Q96K30 269 aa5.57□□□□□ -1.52
LINC00458-202ENST00000427299 NEK1Q96PY6 1258 aa5.57□□□□□ -1.52
LINC00458-202ENST00000427299 TBCBQ99426 244 aa5.57□□□□□ -1.52
LINC00458-202ENST00000427299 MYD88Q99836 296 aa5.57□□□□□ -1.52
LINC00458-202ENST00000427299 TRIM5Q9C035 493 aa5.57□□□□□ -1.52
LINC00458-202ENST00000427299 TTC12Q9H892 705 aaPredicted RBP5.57□□□□□ -1.52
LINC00458-202ENST00000427299 SMURF2Q9HAU4 748 aa5.57□□□□□ -1.52
LINC00458-202ENST00000427299 GPR108Q9NPR9 543 aa5.57□□□□□ -1.52
LINC00458-202ENST00000427299 PDGFCQ9NRA1 345 aa5.57□□□□□ -1.52
LINC00458-202ENST00000427299 HELLSQ9NRZ9 838 aa5.57□□□□□ -1.52
LINC00458-202ENST00000427299 STK32BQ9NY57 414 aa5.57□□□□□ -1.52
LINC00458-202ENST00000427299 CLIP2Q9UDT6 1046 aa5.57□□□□□ -1.52
LINC00458-202ENST00000427299 RGS17Q9UGC6 210 aaPredicted RBP5.57□□□□□ -1.52
LINC00458-202ENST00000427299 CPA4Q9UI42 421 aa5.57□□□□□ -1.52
LINC00458-202ENST00000427299 KCPQ6ZWJ8 1503 aa5.57□□□□□ -1.52
LINC00458-202ENST00000427299 XIRP1Q702N8 1843 aaKnown RBP5.57□□□□□ -1.52
LINC00458-202ENST00000427299 KIAA1551Q9HCM1 1747 aa5.57□□□□□ -1.52
LINC00458-202ENST00000427299 MAP3K15Q6ZN16 1313 aa5.56□□□□□ -1.52
LINC00458-202ENST00000427299 WDR19Q8NEZ3 1342 aa5.56□□□□□ -1.52
LINC00458-202ENST00000427299 BECN2A8MW95 431 aa5.56□□□□□ -1.52
LINC00458-202ENST00000427299 HMGB1P1B2RPK0 211 aaPredicted RBP5.56□□□□□ -1.52
LINC00458-202ENST00000427299 FOXN3O00409 490 aaPredicted RBP5.56□□□□□ -1.52
LINC00458-202ENST00000427299 TCEA3O75764 348 aa5.56□□□□□ -1.52
LINC00458-202ENST00000427299 ZFYP08048 801 aaPredicted RBP5.56□□□□□ -1.52
LINC00458-202ENST00000427299 MYL3P08590 195 aa5.56□□□□□ -1.52
LINC00458-202ENST00000427299 ENGP17813 658 aa5.56□□□□□ -1.52
LINC00458-202ENST00000427299 PRIM2P49643 509 aa5.56□□□□□ -1.52
LINC00458-202ENST00000427299 ZNF75DP51815 510 aa5.56□□□□□ -1.52
LINC00458-202ENST00000427299 SP2Q02086 613 aa5.56□□□□□ -1.52
LINC00458-202ENST00000427299 ZNF543Q08ER8 600 aa5.56□□□□□ -1.52
LINC00458-202ENST00000427299 ST3GAL1Q11201 340 aa5.56□□□□□ -1.52
LINC00458-202ENST00000427299 GCKRQ14397 625 aa5.56□□□□□ -1.52
LINC00458-202ENST00000427299 TRIP6Q15654 476 aaKnown RBP5.56□□□□□ -1.52
LINC00458-202ENST00000427299 ADCK5Q3MIX3 580 aa5.56□□□□□ -1.52
LINC00458-202ENST00000427299 RABL6Q3YEC7 729 aaPredicted RBP5.56□□□□□ -1.52
LINC00458-202ENST00000427299 MCMDC2Q4G0Z9 681 aa5.56□□□□□ -1.52
LINC00458-202ENST00000427299 TAF3Q5VWG9 929 aa5.56□□□□□ -1.52
LINC00458-202ENST00000427299 SFRP4Q6FHJ7 346 aaPredicted RBP5.56□□□□□ -1.52
LINC00458-202ENST00000427299 PLA2G4DQ86XP0 818 aa5.56□□□□□ -1.52
LINC00458-202ENST00000427299 KBTBD3Q8NAB2 608 aa5.56□□□□□ -1.52
LINC00458-202ENST00000427299 CCDC112Q8NEF3 446 aa5.56□□□□□ -1.52
LINC00458-202ENST00000427299 KCNG4Q8TDN1 519 aa5.56□□□□□ -1.52
LINC00458-202ENST00000427299 MAML1Q92585 1016 aa5.56□□□□□ -1.52
LINC00458-202ENST00000427299 DDX17Q92841 729 aaKnown RBP5.56□□□□□ -1.52
LINC00458-202ENST00000427299 NMD3Q96D46 503 aaKnown RBP5.56□□□□□ -1.52
LINC00458-202ENST00000427299 ZC3H10Q96K80 434 aaKnown RBP5.56□□□□□ -1.52
LINC00458-202ENST00000427299 SGCZQ96LD1 299 aa5.56□□□□□ -1.52
LINC00458-202ENST00000427299 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.56□□□□□ -1.52
LINC00458-202ENST00000427299 NLRC4Q9NPP4 1024 aa5.56□□□□□ -1.52
LINC00458-202ENST00000427299 DACT1Q9NYF0 836 aa5.56□□□□□ -1.52
LINC00458-202ENST00000427299 ADAMTS5Q9UNA0 930 aa5.56□□□□□ -1.52
LINC00458-202ENST00000427299 STRCP1A6NGW2 1772 aa5.56□□□□□ -1.52
LINC00458-202ENST00000427299 BCORQ6W2J9 1755 aa5.56□□□□□ -1.52
LINC00458-202ENST00000427299 CCDC88AQ3V6T2 1871 aa5.56□□□□□ -1.52
LINC00458-202ENST00000427299 NHSL1Q5SYE7 1610 aa5.56□□□□□ -1.52
LINC00458-202ENST00000427299 CPDO75976 1380 aa5.55□□□□□ -1.52
LINC00458-202ENST00000427299 CARMIL3Q8ND23 1372 aa5.55□□□□□ -1.52
LINC00458-202ENST00000427299 PCDH11XQ9BZA7 1347 aa5.55□□□□□ -1.52
LINC00458-202ENST00000427299 PCDH11YQ9BZA8 1340 aa5.55□□□□□ -1.52
LINC00458-202ENST00000427299 RASA4BC9J798 803 aa5.55□□□□□ -1.52
LINC00458-202ENST00000427299 E5RJQ4 531 aa5.55□□□□□ -1.52
LINC00458-202ENST00000427299 M0QYG6 137 aa5.55□□□□□ -1.52
LINC00458-202ENST00000427299 CTIFO43310 598 aaKnown RBP5.55□□□□□ -1.52
LINC00458-202ENST00000427299 RASA4O43374 803 aa5.55□□□□□ -1.52
LINC00458-202ENST00000427299 PFKFB2O60825 505 aa5.55□□□□□ -1.52
LINC00458-202ENST00000427299 TAF5LO75529 589 aa5.55□□□□□ -1.52
LINC00458-202ENST00000427299 YEATS4O95619 227 aa5.55□□□□□ -1.52
LINC00458-202ENST00000427299 SLC7A1P30825 629 aa5.55□□□□□ -1.52
LINC00458-202ENST00000427299 PLCD1P51178 756 aa5.55□□□□□ -1.52
LINC00458-202ENST00000427299 SUMO3P55854 103 aaPredicted RBP5.55□□□□□ -1.52
LINC00458-202ENST00000427299 POU5F1BQ06416 359 aa5.55□□□□□ -1.52
LINC00458-202ENST00000427299 IFIT5Q13325 482 aaKnown RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms