RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 DSG4Q86SJ6 1040 aa14.73□□□□□ -0.05
PTPN13-203ENST00000427191 RP9Q8TA86 221 aaKnown RBP14.73□□□□□ -0.05
PTPN13-203ENST00000427191 BCL2L14Q9BZR8 327 aa14.73□□□□□ -0.05
PTPN13-203ENST00000427191 PSME2Q9UL46 239 aa14.73□□□□□ -0.05
PTPN13-203ENST00000427191 OR56A5P0C7T3 313 aa14.73□□□□□ -0.05
PTPN13-203ENST00000427191 XIAPP98170 497 aa14.73□□□□□ -0.05
PTPN13-203ENST00000427191 OTUD5Q96G74 571 aa14.73□□□□□ -0.05
PTPN13-203ENST00000427191 GGA2Q9UJY4 613 aa14.73□□□□□ -0.05
PTPN13-203ENST00000427191 C3orf18Q9UK00 162 aa14.73□□□□□ -0.05
PTPN13-203ENST00000427191 PCDHGC5Q9Y5F6 944 aa14.73□□□□□ -0.05
PTPN13-203ENST00000427191 HAT1O14929 419 aa14.73□□□□□ -0.05
PTPN13-203ENST00000427191 OGTO15294 1046 aa14.73□□□□□ -0.05
PTPN13-203ENST00000427191 POLR1BQ9H9Y6 1135 aa14.73□□□□□ -0.05
PTPN13-203ENST00000427191 CMTM6Q9NX76 183 aa14.73□□□□□ -0.05
PTPN13-203ENST00000427191 SAE1Q9UBE0 346 aaPredicted RBP14.73□□□□□ -0.05
PTPN13-203ENST00000427191 OR6A2O95222 327 aa14.73□□□□□ -0.05
PTPN13-203ENST00000427191 CCDC166P0CW27 439 aa14.73□□□□□ -0.05
PTPN13-203ENST00000427191 CYP11B1P15538 503 aa14.73□□□□□ -0.05
PTPN13-203ENST00000427191 HHIPL2Q6UWX4 724 aa14.73□□□□□ -0.05
PTPN13-203ENST00000427191 TMEM169Q96HH4 297 aa14.73□□□□□ -0.05
PTPN13-203ENST00000427191 ZFP28Q8NHY6 868 aa14.73□□□□□ -0.05
PTPN13-203ENST00000427191 ETAA1Q9NY74 926 aa14.73□□□□□ -0.05
PTPN13-203ENST00000427191 COMMD3-BMI1R4GMX3 469 aa14.73□□□□□ -0.05
PTPN13-203ENST00000427191 MAPTP10636 758 aaKnown RBP14.73□□□□□ -0.05
PTPN13-203ENST00000427191 NTSP30990 170 aa14.73□□□□□ -0.05
PTPN13-203ENST00000427191 OVGP1Q12889 678 aa14.73□□□□□ -0.05
PTPN13-203ENST00000427191 RNF180Q86T96 592 aa14.73□□□□□ -0.05
PTPN13-203ENST00000427191 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.73□□□□□ -0.05
PTPN13-203ENST00000427191 PON1P27169 355 aa14.73□□□□□ -0.05
PTPN13-203ENST00000427191 CRELD2Q6UXH1 353 aaPredicted RBP14.73□□□□□ -0.05
PTPN13-203ENST00000427191 WDR49Q8IV35 697 aa14.73□□□□□ -0.05
PTPN13-203ENST00000427191 ZNF398Q8TD17 642 aa14.73□□□□□ -0.05
PTPN13-203ENST00000427191 STK32AQ8WU08 396 aa14.73□□□□□ -0.05
PTPN13-203ENST00000427191 GJB4Q9NTQ9 266 aa14.73□□□□□ -0.05
PTPN13-203ENST00000427191 AP4E1Q9UPM8 1137 aa14.73□□□□□ -0.05
PTPN13-203ENST00000427191 ERGIC3Q9Y282 383 aa14.73□□□□□ -0.05
PTPN13-203ENST00000427191 C17orf102A2RUQ5 167 aa14.72□□□□□ -0.05
PTPN13-203ENST00000427191 SAGE2PA6NJ88 616 aa14.72□□□□□ -0.05
PTPN13-203ENST00000427191 AHCYL1O43865 530 aa14.72□□□□□ -0.05
PTPN13-203ENST00000427191 CHN2P52757 468 aa14.72□□□□□ -0.05
PTPN13-203ENST00000427191 BIKQ13323 160 aa14.72□□□□□ -0.05
PTPN13-203ENST00000427191 EIF3MQ7L2H7 374 aaKnown RBP14.72□□□□□ -0.05
PTPN13-203ENST00000427191 CLVS1Q8IUQ0 354 aaPredicted RBP14.72□□□□□ -0.05
PTPN13-203ENST00000427191 NOA1Q8NC60 698 aaKnown RBP14.72□□□□□ -0.05
PTPN13-203ENST00000427191 PLA2G4CQ9UP65 541 aa14.72□□□□□ -0.05
PTPN13-203ENST00000427191 ITGB3P05106 788 aa14.72□□□□□ -0.05
PTPN13-203ENST00000427191 ENO2P09104 434 aaPredicted RBP14.72□□□□□ -0.05
PTPN13-203ENST00000427191 SLC2A4P14672 509 aa14.72□□□□□ -0.05
PTPN13-203ENST00000427191 PCSK2P16519 638 aa14.72□□□□□ -0.05
PTPN13-203ENST00000427191 OR1G1P47890 313 aa14.72□□□□□ -0.05
PTPN13-203ENST00000427191 RAD9BQ6WBX8 426 aa14.72□□□□□ -0.05
PTPN13-203ENST00000427191 AGMOQ6ZNB7 445 aa14.72□□□□□ -0.05
PTPN13-203ENST00000427191 FAM92BQ6ZTR7 304 aa14.72□□□□□ -0.05
PTPN13-203ENST00000427191 TMC2Q8TDI7 906 aa14.72□□□□□ -0.05
PTPN13-203ENST00000427191 BBS4Q96RK4 519 aa14.72□□□□□ -0.05
PTPN13-203ENST00000427191 THAP2Q9H0W7 228 aa14.72□□□□□ -0.05
PTPN13-203ENST00000427191 TLR8Q9NR97 1041 aaKnown RBP14.72□□□□□ -0.05
PTPN13-203ENST00000427191 TBC1D30Q9Y2I9 924 aa14.72□□□□□ -0.05
PTPN13-203ENST00000427191 TNS3Q68CZ2 1445 aa14.72□□□□□ -0.05
PTPN13-203ENST00000427191 RAG1P15918 1043 aa14.72□□□□□ -0.05
PTPN13-203ENST00000427191 TNK2Q07912 1038 aa14.72□□□□□ -0.05
PTPN13-203ENST00000427191 STK4Q13043 487 aa14.72□□□□□ -0.05
PTPN13-203ENST00000427191 TRIM28Q13263 835 aaKnown RBP14.72□□□□□ -0.05
PTPN13-203ENST00000427191 RPTNQ6XPR3 784 aa14.72□□□□□ -0.05
PTPN13-203ENST00000427191 YTHDF3Q7Z739 585 aaKnown RBP14.72□□□□□ -0.05
PTPN13-203ENST00000427191 EPB41L4AQ9HCS5 686 aaPredicted RBP14.72□□□□□ -0.05
PTPN13-203ENST00000427191 ANAPC2Q9UJX6 822 aa14.72□□□□□ -0.05
PTPN13-203ENST00000427191 NCF1BA6NI72 391 aaPredicted RBP14.72□□□□□ -0.05
PTPN13-203ENST00000427191 NCF1CA8MVU1 366 aaPredicted RBP14.72□□□□□ -0.05
PTPN13-203ENST00000427191 GRIN3BO60391 1043 aa14.72□□□□□ -0.05
PTPN13-203ENST00000427191 NCF1P14598 390 aaPredicted RBP14.72□□□□□ -0.05
PTPN13-203ENST00000427191 BST2Q10589 180 aaKnown RBP14.72□□□□□ -0.05
PTPN13-203ENST00000427191 ZNF846Q147U1 533 aa14.72□□□□□ -0.05
PTPN13-203ENST00000427191 TSHZ1Q6ZSZ6 1077 aa14.72□□□□□ -0.05
PTPN13-203ENST00000427191 ZFYVE28Q9HCC9 887 aa14.72□□□□□ -0.05
PTPN13-203ENST00000427191 DDX20Q9UHI6 824 aaKnown RBP14.72□□□□□ -0.05
PTPN13-203ENST00000427191 SREBF2Q12772 1141 aa14.72□□□□□ -0.05
PTPN13-203ENST00000427191 SYNE4Q8N205 404 aa14.72□□□□□ -0.05
PTPN13-203ENST00000427191 SGF29Q96ES7 293 aa14.72□□□□□ -0.05
PTPN13-203ENST00000427191 CDK16Q00536 496 aa14.72□□□□□ -0.05
PTPN13-203ENST00000427191 NEDD8Q15843 81 aa14.72□□□□□ -0.05
PTPN13-203ENST00000427191 TAF8Q7Z7C8 310 aa14.72□□□□□ -0.05
PTPN13-203ENST00000427191 ATL1Q8WXF7 558 aa14.72□□□□□ -0.05
PTPN13-203ENST00000427191 PTCD3Q96EY7 689 aaKnown RBP14.72□□□□□ -0.05
PTPN13-203ENST00000427191 TPD52L3Q96J77 140 aa14.72□□□□□ -0.05
PTPN13-203ENST00000427191 ZCWPW1Q9H0M4 648 aa14.72□□□□□ -0.05
PTPN13-203ENST00000427191 SENP2Q9HC62 589 aa14.72□□□□□ -0.05
PTPN13-203ENST00000427191 LIMD1Q9UGP4 676 aa14.72□□□□□ -0.05
PTPN13-203ENST00000427191 E2F8A0AVK6 867 aa14.71□□□□□ -0.05
PTPN13-203ENST00000427191 FAM92AA1XBS5 289 aa14.71□□□□□ -0.05
PTPN13-203ENST00000427191 KPNA6O60684 536 aa14.71□□□□□ -0.05
PTPN13-203ENST00000427191 RAP1GAPP47736 663 aa14.71□□□□□ -0.05
PTPN13-203ENST00000427191 RFX3P48380 749 aa14.71□□□□□ -0.05
PTPN13-203ENST00000427191 NR1H2P55055 460 aa14.71□□□□□ -0.05
PTPN13-203ENST00000427191 ZNHIT3Q15649 155 aaPredicted RBP14.71□□□□□ -0.05
PTPN13-203ENST00000427191 CCDC28BQ9BUN5 200 aa14.71□□□□□ -0.05
PTPN13-203ENST00000427191 FUT8Q9BYC5 575 aa14.71□□□□□ -0.05
PTPN13-203ENST00000427191 TRIM39Q9HCM9 518 aa14.71□□□□□ -0.05
PTPN13-203ENST00000427191 ABLIM1O14639 778 aa14.71□□□□□ -0.05
PTPN13-203ENST00000427191 UBOX5O94941 541 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms