RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 IFNKQ9P0W0 207 aa13.19□□□□□ -0.3
GPC1-204ENST00000426280 HS3ST4Q9Y661 456 aa13.19□□□□□ -0.3
GPC1-204ENST00000426280 MAP3K13O43283 966 aa13.18□□□□□ -0.3
GPC1-204ENST00000426280 TIMM44O43615 452 aa13.18□□□□□ -0.3
GPC1-204ENST00000426280 LRP3O75074 770 aa13.18□□□□□ -0.3
GPC1-204ENST00000426280 PAGE1O75459 146 aa13.18□□□□□ -0.3
GPC1-204ENST00000426280 LUC7L3O95232 432 aaKnown RBP13.18□□□□□ -0.3
GPC1-204ENST00000426280 EPHX1P07099 455 aa13.18□□□□□ -0.3
GPC1-204ENST00000426280 UNGP13051 313 aaPredicted RBP13.18□□□□□ -0.3
GPC1-204ENST00000426280 ITPKAP23677 461 aa13.18□□□□□ -0.3
GPC1-204ENST00000426280 CSKP41240 450 aa13.18□□□□□ -0.3
GPC1-204ENST00000426280 MATKP42679 507 aa13.18□□□□□ -0.3
GPC1-204ENST00000426280 CXCR3P49682 368 aa13.18□□□□□ -0.3
GPC1-204ENST00000426280 UBASH3AP57075 661 aa13.18□□□□□ -0.3
GPC1-204ENST00000426280 IRX4P78413 519 aa13.18□□□□□ -0.3
GPC1-204ENST00000426280 CDR2Q01850 454 aa13.18□□□□□ -0.3
GPC1-204ENST00000426280 SMYD5Q6GMV2 418 aa13.18□□□□□ -0.3
GPC1-204ENST00000426280 KIAA1324Q6UXG2 1013 aaKnown RBP13.18□□□□□ -0.3
GPC1-204ENST00000426280 SERPINA13PQ6UXR4 307 aa13.18□□□□□ -0.3
GPC1-204ENST00000426280 BNIPLQ7Z465 357 aa13.18□□□□□ -0.3
GPC1-204ENST00000426280 DNAAF5Q86Y56 855 aa13.18□□□□□ -0.3
GPC1-204ENST00000426280 TMPRSS6Q8IU80 811 aa13.18□□□□□ -0.3
GPC1-204ENST00000426280 ZNF683Q8IZ20 524 aa13.18□□□□□ -0.3
GPC1-204ENST00000426280 HJURPQ8NCD3 748 aaPredicted RBP13.18□□□□□ -0.3
GPC1-204ENST00000426280 JOSD2Q8TAC2 188 aa13.18□□□□□ -0.3
GPC1-204ENST00000426280 PIGKQ92643 395 aa13.18□□□□□ -0.3
GPC1-204ENST00000426280 TTC17Q96AE7 1141 aa13.18□□□□□ -0.3
GPC1-204ENST00000426280 ALG14Q96F25 216 aa13.18□□□□□ -0.3
GPC1-204ENST00000426280 BTN2A3PQ96KV6 586 aa13.18□□□□□ -0.3
GPC1-204ENST00000426280 NOX5Q96PH1 765 aa13.18□□□□□ -0.3
GPC1-204ENST00000426280 SYNCQ9H7C4 482 aa13.18□□□□□ -0.3
GPC1-204ENST00000426280 PRSS16Q9NQE7 514 aa13.18□□□□□ -0.3
GPC1-204ENST00000426280 ITM2CQ9NQX7 267 aa13.18□□□□□ -0.3
GPC1-204ENST00000426280 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.18□□□□□ -0.3
GPC1-204ENST00000426280 SLCO3A1Q9UIG8 710 aa13.18□□□□□ -0.3
GPC1-204ENST00000426280 PCDHGA5Q9Y5G8 931 aa13.18□□□□□ -0.3
GPC1-204ENST00000426280 THADAQ6YHU6 1953 aa13.18□□□□□ -0.3
GPC1-204ENST00000426280 TTC34A8MYJ7 566 aa13.17□□□□□ -0.3
GPC1-204ENST00000426280 TM4SF5O14894 197 aa13.17□□□□□ -0.3
GPC1-204ENST00000426280 AP5Z1O43299 807 aa13.17□□□□□ -0.3
GPC1-204ENST00000426280 CNTN5O94779 1100 aa13.17□□□□□ -0.3
GPC1-204ENST00000426280 APOEP02649 317 aa13.17□□□□□ -0.3
GPC1-204ENST00000426280 MAOBP27338 520 aa13.17□□□□□ -0.3
GPC1-204ENST00000426280 STAT1P42224 750 aa13.17□□□□□ -0.3
GPC1-204ENST00000426280 SULT1E1P49888 294 aa13.17□□□□□ -0.3
GPC1-204ENST00000426280 LMNB2Q03252 620 aa13.17□□□□□ -0.3
GPC1-204ENST00000426280 ARID5AQ03989 594 aa13.17□□□□□ -0.3
GPC1-204ENST00000426280 CAMK2GQ13555 558 aaPredicted RBP13.17□□□□□ -0.3
GPC1-204ENST00000426280 AUHQ13825 339 aaKnown RBP13.17□□□□□ -0.3
GPC1-204ENST00000426280 PUM1Q14671 1186 aaKnown RBP eCLIP13.17□□□□□ -0.3
GPC1-204ENST00000426280 EIF4HQ15056 248 aaKnown RBP13.17□□□□□ -0.3
GPC1-204ENST00000426280 ELF2Q15723 593 aa13.17□□□□□ -0.3
GPC1-204ENST00000426280 PITRM1Q5JRX3 1037 aa13.17□□□□□ -0.3
GPC1-204ENST00000426280 FAM102AQ5T9C2 384 aaPredicted RBP13.17□□□□□ -0.3
GPC1-204ENST00000426280 CXorf57Q6NSI4 855 aaKnown RBP13.17□□□□□ -0.3
GPC1-204ENST00000426280 AHI1Q8N157 1196 aa13.17□□□□□ -0.3
GPC1-204ENST00000426280 CCAR2Q8N163 923 aaKnown RBP13.17□□□□□ -0.3
GPC1-204ENST00000426280 ATP6V0D2Q8N8Y2 350 aa13.17□□□□□ -0.3
GPC1-204ENST00000426280 NEK11Q8NG66 645 aa13.17□□□□□ -0.3
GPC1-204ENST00000426280 WFIKKN2Q8TEU8 576 aa13.17□□□□□ -0.3
GPC1-204ENST00000426280 UCMAQ8WVF2 138 aa13.17□□□□□ -0.3
GPC1-204ENST00000426280 BAP1Q92560 729 aa13.17□□□□□ -0.3
GPC1-204ENST00000426280 CFAP57Q96MR6 1250 aa13.17□□□□□ -0.3
GPC1-204ENST00000426280 XPO4Q9C0E2 1151 aaKnown RBP13.17□□□□□ -0.3
GPC1-204ENST00000426280 SIK2Q9H0K1 926 aa13.17□□□□□ -0.3
GPC1-204ENST00000426280 PRDM16Q9HAZ2 1276 aa13.17□□□□□ -0.3
GPC1-204ENST00000426280 ARHGEF38Q9NXL2 777 aa13.17□□□□□ -0.3
GPC1-204ENST00000426280 USP36Q9P275 1121 aaKnown RBP13.17□□□□□ -0.3
GPC1-204ENST00000426280 VANGL2Q9ULK5 521 aa13.17□□□□□ -0.3
GPC1-204ENST00000426280 SLCO1B1Q9Y6L6 691 aa13.17□□□□□ -0.3
GPC1-204ENST00000426280 TNRC6BQ9UPQ9 1833 aaKnown RBP13.16□□□□□ -0.3
GPC1-204ENST00000426280 PRR5-ARHGAP8B1AHC4 643 aa13.16□□□□□ -0.3
GPC1-204ENST00000426280 CDX4O14627 284 aaPredicted RBP13.16□□□□□ -0.3
GPC1-204ENST00000426280 SLC30A4O14863 429 aa13.16□□□□□ -0.3
GPC1-204ENST00000426280 DLDP09622 509 aaKnown RBP13.16□□□□□ -0.3
GPC1-204ENST00000426280 VAV1P15498 845 aa13.16□□□□□ -0.3
GPC1-204ENST00000426280 POLR2EP19388 210 aaKnown RBP13.16□□□□□ -0.3
GPC1-204ENST00000426280 MMP8P22894 467 aa13.16□□□□□ -0.3
GPC1-204ENST00000426280 CCR1P32246 355 aa13.16□□□□□ -0.3
GPC1-204ENST00000426280 STK19P49842 368 aaPredicted RBP13.16□□□□□ -0.3
GPC1-204ENST00000426280 TPMTP51580 245 aa13.16□□□□□ -0.3
GPC1-204ENST00000426280 ARHGAP8P85298 464 aa13.16□□□□□ -0.3
GPC1-204ENST00000426280 RPL6Q02878 288 aaKnown RBP13.16□□□□□ -0.3
GPC1-204ENST00000426280 FNDC3BQ53EP0 1204 aaKnown RBP13.16□□□□□ -0.3
GPC1-204ENST00000426280 ALFQ53S48 1182 aa13.16□□□□□ -0.3
GPC1-204ENST00000426280 E4F1Q66K89 784 aaPredicted RBP13.16□□□□□ -0.3
GPC1-204ENST00000426280 LPCAT2Q7L5N7 544 aa13.16□□□□□ -0.3
GPC1-204ENST00000426280 IRF2BP2Q7Z5L9 587 aa13.16□□□□□ -0.3
GPC1-204ENST00000426280 RNF34Q969K3 372 aa13.16□□□□□ -0.3
GPC1-204ENST00000426280 RPL10LQ96L21 214 aaKnown RBP13.16□□□□□ -0.3
GPC1-204ENST00000426280 DDX50Q9BQ39 737 aaKnown RBP13.16□□□□□ -0.3
GPC1-204ENST00000426280 C11orf70Q9BRQ4 267 aa13.16□□□□□ -0.3
GPC1-204ENST00000426280 SYT11Q9BT88 431 aa13.16□□□□□ -0.3
GPC1-204ENST00000426280 IRX2Q9BZI1 471 aaPredicted RBP13.16□□□□□ -0.3
GPC1-204ENST00000426280 TKTL2Q9H0I9 626 aa13.16□□□□□ -0.3
GPC1-204ENST00000426280 METTL5Q9NRN9 209 aaKnown RBP13.16□□□□□ -0.3
GPC1-204ENST00000426280 VPS45Q9NRW7 570 aa13.16□□□□□ -0.3
GPC1-204ENST00000426280 WSB2Q9NYS7 404 aaPredicted RBP13.16□□□□□ -0.3
GPC1-204ENST00000426280 PILRBQ9UKJ0 227 aa13.16□□□□□ -0.3
GPC1-204ENST00000426280 ERVW-1Q9UQF0 538 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms