RNA–Protein interactions for RNA: ENST00000425516.1

CHCHD3P1-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 1, humanhuman

BASIC

Gene CHCHD3P1, Length 676 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3P1-201ENST00000425516 NME3Q13232 169 aa7.32□□□□□ -1.24
CHCHD3P1-201ENST00000425516 TDGQ13569 410 aa7.32□□□□□ -1.24
CHCHD3P1-201ENST00000425516 PIGHQ14442 188 aaPredicted RBP7.32□□□□□ -1.24
CHCHD3P1-201ENST00000425516 CDO1Q16878 200 aa7.32□□□□□ -1.24
CHCHD3P1-201ENST00000425516 RNFT1Q5M7Z0 435 aa7.32□□□□□ -1.24
CHCHD3P1-201ENST00000425516 ADGRF1Q5T601 910 aa7.32□□□□□ -1.24
CHCHD3P1-201ENST00000425516 NUGGCQ68CJ6 796 aa7.32□□□□□ -1.24
CHCHD3P1-201ENST00000425516 RNF43Q68DV7 783 aa7.32□□□□□ -1.24
CHCHD3P1-201ENST00000425516 TRIM68Q6AZZ1 485 aa7.32□□□□□ -1.24
CHCHD3P1-201ENST00000425516 NADSYN1Q6IA69 706 aa7.32□□□□□ -1.24
CHCHD3P1-201ENST00000425516 RHBDF2Q6PJF5 856 aa7.32□□□□□ -1.24
CHCHD3P1-201ENST00000425516 FAM131BQ86XD5 332 aa7.32□□□□□ -1.24
CHCHD3P1-201ENST00000425516 DENND1CQ8IV53 801 aa7.32□□□□□ -1.24
CHCHD3P1-201ENST00000425516 ZNF683Q8IZ20 524 aa7.32□□□□□ -1.24
CHCHD3P1-201ENST00000425516 CPXM2Q8N436 756 aa7.32□□□□□ -1.24
CHCHD3P1-201ENST00000425516 CHFRQ96EP1 664 aa7.32□□□□□ -1.24
CHCHD3P1-201ENST00000425516 MYEOVQ96EZ4 313 aa7.32□□□□□ -1.24
CHCHD3P1-201ENST00000425516 BTN2A3PQ96KV6 586 aa7.32□□□□□ -1.24
CHCHD3P1-201ENST00000425516 HAPLN3Q96S86 360 aa7.32□□□□□ -1.24
CHCHD3P1-201ENST00000425516 PEBP4Q96S96 227 aa7.32□□□□□ -1.24
CHCHD3P1-201ENST00000425516 MAGEB5Q9BZ81 275 aa7.32□□□□□ -1.24
CHCHD3P1-201ENST00000425516 WDCPQ9H6R7 721 aa7.32□□□□□ -1.24
CHCHD3P1-201ENST00000425516 FAM204AQ9H8W3 233 aa7.32□□□□□ -1.24
CHCHD3P1-201ENST00000425516 LUC7LQ9NQ29 371 aaKnown RBP7.32□□□□□ -1.24
CHCHD3P1-201ENST00000425516 SLC2A4RGQ9NR83 387 aa7.32□□□□□ -1.24
CHCHD3P1-201ENST00000425516 THG1LQ9NWX6 298 aaKnown RBP7.32□□□□□ -1.24
CHCHD3P1-201ENST00000425516 COX16Q9P0S2 106 aa7.32□□□□□ -1.24
CHCHD3P1-201ENST00000425516 TBC1D14Q9P2M4 693 aa7.32□□□□□ -1.24
CHCHD3P1-201ENST00000425516 IP6K2Q9UHH9 426 aa7.32□□□□□ -1.24
CHCHD3P1-201ENST00000425516 SORCS3Q9UPU3 1222 aa7.32□□□□□ -1.24
CHCHD3P1-201ENST00000425516 SH3BP1Q9Y3L3 701 aa7.32□□□□□ -1.24
CHCHD3P1-201ENST00000425516 WNT6Q9Y6F9 365 aa7.32□□□□□ -1.24
CHCHD3P1-201ENST00000425516 MYO10Q9HD67 2058 aa7.32□□□□□ -1.24
CHCHD3P1-201ENST00000425516 GOLGA6L7A0A1B0GV03 622 aa7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 BUB1BO60566 1050 aaPredicted RBP7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 PAGE1O75459 146 aa7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 IPO7O95373 1038 aaKnown RBP7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 PENKP01210 267 aaPredicted RBP7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 SLC2A3P11169 496 aa7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 SRFP11831 508 aa7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 IL1R2P27930 398 aa7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 MIPP30301 263 aa7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 SLC6A4P31645 630 aa7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 MAN1A1P33908 653 aa7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 CHKAP35790 457 aa7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 HARS2P49590 506 aaKnown RBP7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 NRG1Q02297 640 aaPredicted RBP7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 SLC25A11Q02978 314 aaKnown RBP7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 TNK2Q07912 1038 aa7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 SCAPQ12770 1279 aa7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 SEMA3BQ13214 749 aa7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 CLN3Q13286 438 aa7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 RUNX3Q13761 415 aa7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 PDGFRLQ15198 375 aa7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 C5orf22Q49AR2 442 aa7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 OXLD1Q5BKU9 147 aa7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 MS4A13Q5J8X5 152 aa7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 PIK3R6Q5UE93 754 aa7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 MANEALQ5VSG8 457 aa7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 DAB2IPQ5VWQ8 1189 aa7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 SND1Q7KZF4 910 aaKnown RBP eCLIP7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 LYSMD3Q7Z3D4 306 aa7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 SLFN11Q7Z7L1 901 aa7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 C14orf80Q86SX3 495 aa7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 TMEM25Q86YD3 366 aa7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 CCDC185Q8N715 623 aa7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 ATP6V0D2Q8N8Y2 350 aa7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 TPCN2Q8NHX9 752 aa7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 NTAN1Q96AB6 310 aa7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 C1orf74Q96LT6 269 aa7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 UHRF1Q96T88 793 aaPredicted RBP7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 NCAPGQ9BPX3 1015 aa7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 TKTL2Q9H0I9 626 aa7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 OSBPL2Q9H1P3 480 aa7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 EBF3Q9H4W6 596 aa7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 ECT2Q9H8V3 914 aa7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 SPHK2Q9NRA0 654 aa7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 DUS2Q9NX74 493 aaKnown RBP7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 GTSE1Q9NYZ3 720 aa7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 MARK1Q9P0L2 795 aa7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 TRIM10Q9UDY6 481 aa7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 LCMT1Q9UIC8 334 aa7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 LSM7Q9UK45 103 aaKnown RBP7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 FBXO10Q9UK96 956 aa7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 FZD10Q9ULW2 581 aa7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 USP18Q9UMW8 372 aa7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 DUSP12Q9UNI6 340 aa7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 HS3ST4Q9Y661 456 aa7.31□□□□□ -1.24
CHCHD3P1-201ENST00000425516 COL4A2P08572 1712 aa7.3□□□□□ -1.24
CHCHD3P1-201ENST00000425516 IGLV3-10A0A075B6K4 115 aa7.3□□□□□ -1.24
CHCHD3P1-201ENST00000425516 DRGXA6NNA5 263 aa7.3□□□□□ -1.24
CHCHD3P1-201ENST00000425516 FAM72CH0Y354 149 aa7.3□□□□□ -1.24
CHCHD3P1-201ENST00000425516 TRDMT1O14717 391 aaKnown RBP7.3□□□□□ -1.24
CHCHD3P1-201ENST00000425516 HOXC11O43248 304 aaPredicted RBP7.3□□□□□ -1.24
CHCHD3P1-201ENST00000425516 RNF8O76064 485 aa7.3□□□□□ -1.24
CHCHD3P1-201ENST00000425516 NFATC1O95644 943 aa7.3□□□□□ -1.24
CHCHD3P1-201ENST00000425516 APOEP02649 317 aa7.3□□□□□ -1.24
CHCHD3P1-201ENST00000425516 CYP17A1P05093 508 aa7.3□□□□□ -1.24
CHCHD3P1-201ENST00000425516 PTMAP06454 111 aaKnown RBP7.3□□□□□ -1.24
CHCHD3P1-201ENST00000425516 GLULP15104 373 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms