RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 SIX6OS1Q8N1H7 587 aa15.56■□□□□ 0.08
ATG4B-209ENST00000425239 HSFY1Q96LI6 401 aa15.56■□□□□ 0.08
ATG4B-209ENST00000425239 GSDMAQ96QA5 445 aa15.56■□□□□ 0.08
ATG4B-209ENST00000425239 FAM129BQ96TA1 746 aa15.56■□□□□ 0.08
ATG4B-209ENST00000425239 PABPC3Q9H361 631 aaKnown RBP15.56■□□□□ 0.08
ATG4B-209ENST00000425239 TP53BP1Q12888 1972 aaPredicted RBP15.55■□□□□ 0.08
ATG4B-209ENST00000425239 COL5A1P20908 1838 aaPredicted RBP15.55■□□□□ 0.08
ATG4B-209ENST00000425239 A0A1W2PPC4 97 aa15.55■□□□□ 0.08
ATG4B-209ENST00000425239 TRABD2BA6NFA1 517 aa15.55■□□□□ 0.08
ATG4B-209ENST00000425239 WNT9AO14904 365 aa15.55■□□□□ 0.08
ATG4B-209ENST00000425239 TNFSF14O43557 240 aa15.55■□□□□ 0.08
ATG4B-209ENST00000425239 SIN3BO75182 1162 aa15.55■□□□□ 0.08
ATG4B-209ENST00000425239 FSBPO95073 299 aa15.55■□□□□ 0.08
ATG4B-209ENST00000425239 LTFP02788 710 aa15.55■□□□□ 0.08
ATG4B-209ENST00000425239 TBXAS1P24557 533 aaPredicted RBP15.55■□□□□ 0.08
ATG4B-209ENST00000425239 CSKP41240 450 aa15.55■□□□□ 0.08
ATG4B-209ENST00000425239 FMO5P49326 533 aa15.55■□□□□ 0.08
ATG4B-209ENST00000425239 RPS24P62847 133 aaKnown RBP15.55■□□□□ 0.08
ATG4B-209ENST00000425239 RACK1P63244 317 aaKnown RBP15.55■□□□□ 0.08
ATG4B-209ENST00000425239 ACAP1Q15027 740 aa15.55■□□□□ 0.08
ATG4B-209ENST00000425239 NUGGCQ68CJ6 796 aa15.55■□□□□ 0.08
ATG4B-209ENST00000425239 MMS22LQ6ZRQ5 1243 aa15.55■□□□□ 0.08
ATG4B-209ENST00000425239 PDZD3Q86UT5 571 aa15.55■□□□□ 0.08
ATG4B-209ENST00000425239 KDM1BQ8NB78 822 aa15.55■□□□□ 0.08
ATG4B-209ENST00000425239 SNX19Q92543 992 aa15.55■□□□□ 0.08
ATG4B-209ENST00000425239 GOLGA1Q92805 767 aa15.55■□□□□ 0.08
ATG4B-209ENST00000425239 ERCC4Q92889 916 aaPredicted RBP15.55■□□□□ 0.08
ATG4B-209ENST00000425239 BBC3Q96PG8 261 aaPredicted RBP15.55■□□□□ 0.08
ATG4B-209ENST00000425239 NEUROG2Q9H2A3 272 aa15.55■□□□□ 0.08
ATG4B-209ENST00000425239 ARMCX3Q9UH62 379 aaPredicted RBP15.55■□□□□ 0.08
ATG4B-209ENST00000425239 ADAMTS1Q9UHI8 967 aa15.55■□□□□ 0.08
ATG4B-209ENST00000425239 SCML1Q9UN30 329 aa15.55■□□□□ 0.08
ATG4B-209ENST00000425239 KNTC1P50748 2209 aa15.55■□□□□ 0.08
ATG4B-209ENST00000425239 A0A1B0GTQ1 180 aa15.54■□□□□ 0.08
ATG4B-209ENST00000425239 VILLO15195 856 aa15.54■□□□□ 0.08
ATG4B-209ENST00000425239 CD44P16070 742 aaKnown RBP15.54■□□□□ 0.08
ATG4B-209ENST00000425239 CTSOP43234 321 aaPredicted RBP15.54■□□□□ 0.08
ATG4B-209ENST00000425239 GRK6P43250 576 aa15.54■□□□□ 0.08
ATG4B-209ENST00000425239 GPD2P43304 727 aa15.54■□□□□ 0.08
ATG4B-209ENST00000425239 SLC11A2P49281 568 aa15.54■□□□□ 0.08
ATG4B-209ENST00000425239 TBX4P57082 545 aa15.54■□□□□ 0.08
ATG4B-209ENST00000425239 YWHAEP62258 255 aaKnown RBP15.54■□□□□ 0.08
ATG4B-209ENST00000425239 LRRC63Q05C16 580 aa15.54■□□□□ 0.08
ATG4B-209ENST00000425239 TEAD4Q15561 434 aa15.54■□□□□ 0.08
ATG4B-209ENST00000425239 MS4A13Q5J8X5 152 aa15.54■□□□□ 0.08
ATG4B-209ENST00000425239 PRAMEF14Q5SWL7 426 aa15.54■□□□□ 0.08
ATG4B-209ENST00000425239 SYPL2Q5VXT5 272 aa15.54■□□□□ 0.08
ATG4B-209ENST00000425239 ZNF776Q68DI1 518 aaPredicted RBP15.54■□□□□ 0.08
ATG4B-209ENST00000425239 KIAA0895LQ68EN5 471 aa15.54■□□□□ 0.08
ATG4B-209ENST00000425239 SCUBE3Q8IX30 993 aa15.54■□□□□ 0.08
ATG4B-209ENST00000425239 DQX1Q8TE96 717 aaKnown RBP15.54■□□□□ 0.08
ATG4B-209ENST00000425239 FAM131CQ96AQ9 280 aa15.54■□□□□ 0.08
ATG4B-209ENST00000425239 NUCKS1Q9H1E3 243 aaKnown RBP15.54■□□□□ 0.08
ATG4B-209ENST00000425239 SCUBE2Q9NQ36 999 aa15.54■□□□□ 0.08
ATG4B-209ENST00000425239 FBXL12Q9NXK8 326 aa15.54■□□□□ 0.08
ATG4B-209ENST00000425239 XPO7Q9UIA9 1087 aaKnown RBP15.54■□□□□ 0.08
ATG4B-209ENST00000425239 SLCO3A1Q9UIG8 710 aa15.54■□□□□ 0.08
ATG4B-209ENST00000425239 CNTN6Q9UQ52 1028 aa15.54■□□□□ 0.08
ATG4B-209ENST00000425239 NAALADL1Q9UQQ1 740 aa15.54■□□□□ 0.08
ATG4B-209ENST00000425239 ITIH6Q6UXX5 1313 aa15.53■□□□□ 0.08
ATG4B-209ENST00000425239 A0A1W2PR77 199 aa15.53■□□□□ 0.08
ATG4B-209ENST00000425239 FAM149AA5PLN7 773 aa15.53■□□□□ 0.08
ATG4B-209ENST00000425239 TTC34A8MYJ7 566 aa15.53■□□□□ 0.08
ATG4B-209ENST00000425239 BRD2P25440 801 aaKnown RBP15.53■□□□□ 0.08
ATG4B-209ENST00000425239 CYP4F3Q08477 520 aa15.53■□□□□ 0.08
ATG4B-209ENST00000425239 NNTQ13423 1086 aa15.53■□□□□ 0.08
ATG4B-209ENST00000425239 DCAF6Q58WW2 860 aa15.53■□□□□ 0.08
ATG4B-209ENST00000425239 NCEH1Q6PIU2 408 aa15.53■□□□□ 0.08
ATG4B-209ENST00000425239 MFN1Q8IWA4 741 aa15.53■□□□□ 0.08
ATG4B-209ENST00000425239 CFAP52Q8N1V2 620 aa15.53■□□□□ 0.08
ATG4B-209ENST00000425239 HNRNPLLQ8WVV9 542 aaKnown RBP15.53■□□□□ 0.08
ATG4B-209ENST00000425239 PTPRN2Q92932 1015 aa15.53■□□□□ 0.08
ATG4B-209ENST00000425239 SLC6A18Q96N87 628 aa15.53■□□□□ 0.08
ATG4B-209ENST00000425239 RMND1Q9NWS8 449 aa15.53■□□□□ 0.08
ATG4B-209ENST00000425239 STIM2Q9P246 746 aa15.53■□□□□ 0.08
ATG4B-209ENST00000425239 ERVW-1Q9UQF0 538 aa15.53■□□□□ 0.08
ATG4B-209ENST00000425239 TLR6Q9Y2C9 796 aa15.53■□□□□ 0.08
ATG4B-209ENST00000425239 PCDHB4Q9Y5E5 795 aa15.53■□□□□ 0.08
ATG4B-209ENST00000425239 GCN1Q92616 2671 aaKnown RBP15.52■□□□□ 0.08
ATG4B-209ENST00000425239 ARID1BQ8NFD5 2236 aaPredicted RBP15.52■□□□□ 0.08
ATG4B-209ENST00000425239 KALRNO60229 2985 aa15.52■□□□□ 0.08
ATG4B-209ENST00000425239 A0A087WV48 116 aa15.52■□□□□ 0.08
ATG4B-209ENST00000425239 TARSL2A2RTX5 802 aaKnown RBP15.52■□□□□ 0.08
ATG4B-209ENST00000425239 GOLGA8CPA6NN73 597 aa15.52■□□□□ 0.08
ATG4B-209ENST00000425239 MID1O15344 667 aa15.52■□□□□ 0.08
ATG4B-209ENST00000425239 IGLV3-25P01717 112 aa15.52■□□□□ 0.08
ATG4B-209ENST00000425239 ASLP04424 464 aa15.52■□□□□ 0.08
ATG4B-209ENST00000425239 CCT8P50990 548 aa15.52■□□□□ 0.08
ATG4B-209ENST00000425239 IL9RQ01113 521 aa15.52■□□□□ 0.08
ATG4B-209ENST00000425239 CST6Q15828 149 aa15.52■□□□□ 0.08
ATG4B-209ENST00000425239 TTC31Q49AM3 519 aaPredicted RBP15.52■□□□□ 0.08
ATG4B-209ENST00000425239 PITRM1Q5JRX3 1037 aa15.52■□□□□ 0.08
ATG4B-209ENST00000425239 BEND5Q7L4P6 421 aa15.52■□□□□ 0.08
ATG4B-209ENST00000425239 ARHGEF19Q8IW93 802 aa15.52■□□□□ 0.08
ATG4B-209ENST00000425239 DHX40Q8IX18 779 aaKnown RBP15.52■□□□□ 0.08
ATG4B-209ENST00000425239 APCDD1Q8J025 514 aa15.52■□□□□ 0.08
ATG4B-209ENST00000425239 GALNT15Q8N3T1 639 aa15.52■□□□□ 0.08
ATG4B-209ENST00000425239 AADATQ8N5Z0 425 aa15.52■□□□□ 0.08
ATG4B-209ENST00000425239 ZNF557Q8N988 423 aaPredicted RBP15.52■□□□□ 0.08
ATG4B-209ENST00000425239 HJURPQ8NCD3 748 aaPredicted RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms