RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 NOS2P35228 1153 aa22.27■■□□□ 1.16
CDCP1-202ENST00000425231 CSKP41240 450 aa22.27■■□□□ 1.16
CDCP1-202ENST00000425231 GABRB2P47870 512 aa22.27■■□□□ 1.16
CDCP1-202ENST00000425231 KLK7P49862 253 aa22.27■■□□□ 1.16
CDCP1-202ENST00000425231 CDH18Q13634 790 aa22.27■■□□□ 1.16
CDCP1-202ENST00000425231 SASS6Q6UVJ0 657 aa22.27■■□□□ 1.16
CDCP1-202ENST00000425231 NOP9Q86U38 636 aaKnown RBP22.27■■□□□ 1.16
CDCP1-202ENST00000425231 CACUL1Q86Y37 369 aa22.27■■□□□ 1.16
CDCP1-202ENST00000425231 FOXJ1Q92949 421 aa22.27■■□□□ 1.16
CDCP1-202ENST00000425231 MRGPRX3Q96LB0 322 aa22.27■■□□□ 1.16
CDCP1-202ENST00000425231 GPR174Q9BXC1 333 aa22.27■■□□□ 1.16
CDCP1-202ENST00000425231 PDCL3Q9H2J4 239 aa22.27■■□□□ 1.16
CDCP1-202ENST00000425231 CAPN10Q9HC96 672 aa22.27■■□□□ 1.16
CDCP1-202ENST00000425231 COX16Q9P0S2 106 aa22.27■■□□□ 1.16
CDCP1-202ENST00000425231 SLC6A14Q9UN76 642 aa22.27■■□□□ 1.16
CDCP1-202ENST00000425231 F5H5T6 163 aa22.26■■□□□ 1.15
CDCP1-202ENST00000425231 H0Y626 953 aa22.26■■□□□ 1.15
CDCP1-202ENST00000425231 CFIP05156 583 aa22.26■■□□□ 1.15
CDCP1-202ENST00000425231 SERPINF2P08697 491 aa22.26■■□□□ 1.15
CDCP1-202ENST00000425231 ACADMP11310 421 aa22.26■■□□□ 1.15
CDCP1-202ENST00000425231 ENGP17813 658 aa22.26■■□□□ 1.15
CDCP1-202ENST00000425231 ABCB4P21439 1286 aa22.26■■□□□ 1.15
CDCP1-202ENST00000425231 OXTRP30559 389 aa22.26■■□□□ 1.15
CDCP1-202ENST00000425231 MATKP42679 507 aa22.26■■□□□ 1.15
CDCP1-202ENST00000425231 PITRM1Q5JRX3 1037 aa22.26■■□□□ 1.15
CDCP1-202ENST00000425231 OTUD1Q5VV17 481 aaPredicted RBP22.26■■□□□ 1.15
CDCP1-202ENST00000425231 TAF3Q5VWG9 929 aa22.26■■□□□ 1.15
CDCP1-202ENST00000425231 DAB2IPQ5VWQ8 1189 aa22.26■■□□□ 1.15
CDCP1-202ENST00000425231 CCDC117Q8IWD4 279 aaPredicted RBP22.26■■□□□ 1.15
CDCP1-202ENST00000425231 CADM4Q8NFZ8 388 aa22.26■■□□□ 1.15
CDCP1-202ENST00000425231 EPS8L1Q8TE68 723 aa22.26■■□□□ 1.15
CDCP1-202ENST00000425231 NUP58Q9BVL2 599 aa22.26■■□□□ 1.15
CDCP1-202ENST00000425231 ADAM33Q9BZ11 813 aa22.26■■□□□ 1.15
CDCP1-202ENST00000425231 FSCN3Q9NQT6 498 aa22.26■■□□□ 1.15
CDCP1-202ENST00000425231 ANO10Q9NW15 660 aa22.26■■□□□ 1.15
CDCP1-202ENST00000425231 KIAA1522Q9P206 1035 aaPredicted RBP22.26■■□□□ 1.15
CDCP1-202ENST00000425231 SUN2Q9UH99 717 aa22.26■■□□□ 1.15
CDCP1-202ENST00000425231 ASLP04424 464 aa22.25■■□□□ 1.15
CDCP1-202ENST00000425231 MAOBP27338 520 aa22.25■■□□□ 1.15
CDCP1-202ENST00000425231 NME3Q13232 169 aa22.25■■□□□ 1.15
CDCP1-202ENST00000425231 SYCP2LQ5T4T6 812 aa22.25■■□□□ 1.15
CDCP1-202ENST00000425231 DNASE2BQ8WZ79 361 aa22.25■■□□□ 1.15
CDCP1-202ENST00000425231 RNF34Q969K3 372 aa22.25■■□□□ 1.15
CDCP1-202ENST00000425231 NT5C3BQ969T7 300 aa22.25■■□□□ 1.15
CDCP1-202ENST00000425231 C18orf8Q96DM3 657 aa22.25■■□□□ 1.15
CDCP1-202ENST00000425231 NPY6RQ99463 290 aa22.25■■□□□ 1.15
CDCP1-202ENST00000425231 MTG2Q9H4K7 406 aa22.25■■□□□ 1.15
CDCP1-202ENST00000425231 FBRSQ9HAH7 460 aa22.25■■□□□ 1.15
CDCP1-202ENST00000425231 ADAMTS9Q9P2N4 1935 aa22.25■■□□□ 1.15
CDCP1-202ENST00000425231 PCDH15Q96QU1 1955 aa22.24■■□□□ 1.15
CDCP1-202ENST00000425231 M0QYT0 321 aa22.24■■□□□ 1.15
CDCP1-202ENST00000425231 EPHB6O15197 1021 aa22.24■■□□□ 1.15
CDCP1-202ENST00000425231 KCNK5O95279 499 aa22.24■■□□□ 1.15
CDCP1-202ENST00000425231 MMEP08473 750 aa22.24■■□□□ 1.15
CDCP1-202ENST00000425231 TFE3P19532 575 aaPredicted RBP22.24■■□□□ 1.15
CDCP1-202ENST00000425231 CTSOP43234 321 aaPredicted RBP22.24■■□□□ 1.15
CDCP1-202ENST00000425231 RPS14P62263 151 aaKnown RBP22.24■■□□□ 1.15
CDCP1-202ENST00000425231 FBXL22Q6P050 247 aa22.24■■□□□ 1.15
CDCP1-202ENST00000425231 RABEPKQ7Z6M1 372 aa22.24■■□□□ 1.15
CDCP1-202ENST00000425231 ERICH1Q86X53 443 aa22.24■■□□□ 1.15
CDCP1-202ENST00000425231 XYLT1Q86Y38 959 aa22.24■■□□□ 1.15
CDCP1-202ENST00000425231 RGL4Q8IZJ4 473 aa22.24■■□□□ 1.15
CDCP1-202ENST00000425231 APCDD1Q8J025 514 aa22.24■■□□□ 1.15
CDCP1-202ENST00000425231 CCAR2Q8N163 923 aaKnown RBP22.24■■□□□ 1.15
CDCP1-202ENST00000425231 KDM1BQ8NB78 822 aa22.24■■□□□ 1.15
CDCP1-202ENST00000425231 SIK3Q9Y2K2 1263 aa22.24■■□□□ 1.15
CDCP1-202ENST00000425231 METTL12A8MUP2 240 aa22.23■■□□□ 1.15
CDCP1-202ENST00000425231 LSM8O95777 96 aaKnown RBP22.23■■□□□ 1.15
CDCP1-202ENST00000425231 KCNA4P22459 653 aa22.23■■□□□ 1.15
CDCP1-202ENST00000425231 SCNN1AP37088 669 aa22.23■■□□□ 1.15
CDCP1-202ENST00000425231 MAPK8P45983 427 aa22.23■■□□□ 1.15
CDCP1-202ENST00000425231 RNASE9P60153 205 aaKnown RBP22.23■■□□□ 1.15
CDCP1-202ENST00000425231 ST8SIA6P61647 398 aa22.23■■□□□ 1.15
CDCP1-202ENST00000425231 GFPT1Q06210 699 aaPredicted RBP22.23■■□□□ 1.15
CDCP1-202ENST00000425231 AUHQ13825 339 aaKnown RBP22.23■■□□□ 1.15
CDCP1-202ENST00000425231 ARID5BQ14865 1188 aa22.23■■□□□ 1.15
CDCP1-202ENST00000425231 STX1AQ16623 288 aa22.23■■□□□ 1.15
CDCP1-202ENST00000425231 PLEKHG6Q3KR16 790 aa22.23■■□□□ 1.15
CDCP1-202ENST00000425231 C2CD6Q53TS8 623 aa22.23■■□□□ 1.15
CDCP1-202ENST00000425231 N4BP2L1Q5TBK1 243 aaPredicted RBP22.23■■□□□ 1.15
CDCP1-202ENST00000425231 CIR1Q86X95 450 aaPredicted RBP22.23■■□□□ 1.15
CDCP1-202ENST00000425231 IGSF8Q969P0 613 aa22.23■■□□□ 1.15
CDCP1-202ENST00000425231 FAM207AQ9NSI2 230 aaPredicted RBP22.23■■□□□ 1.15
CDCP1-202ENST00000425231 PIGVQ9NUD9 493 aa22.23■■□□□ 1.15
CDCP1-202ENST00000425231 RRN3Q9NYV6 651 aa22.23■■□□□ 1.15
CDCP1-202ENST00000425231 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.23■■□□□ 1.15
CDCP1-202ENST00000425231 LIMA1Q9UHB6 759 aaKnown RBP22.23■■□□□ 1.15
CDCP1-202ENST00000425231 NOCTQ9UK39 431 aaKnown RBP22.23■■□□□ 1.15
CDCP1-202ENST00000425231 ERVW-1Q9UQF0 538 aa22.23■■□□□ 1.15
CDCP1-202ENST00000425231 HS3ST4Q9Y661 456 aa22.23■■□□□ 1.15
CDCP1-202ENST00000425231 ASCC3Q8N3C0 2202 aaKnown RBP22.23■■□□□ 1.15
CDCP1-202ENST00000425231 FAM170AA1A519 330 aa22.23■■□□□ 1.15
CDCP1-202ENST00000425231 LRRC10BA6NIK2 292 aa22.23■■□□□ 1.15
CDCP1-202ENST00000425231 MOCS3O95396 460 aa22.23■■□□□ 1.15
CDCP1-202ENST00000425231 TPM2P07951 284 aa22.23■■□□□ 1.15
CDCP1-202ENST00000425231 SRPRAP08240 638 aaKnown RBP22.23■■□□□ 1.15
CDCP1-202ENST00000425231 COPB1P53618 953 aaKnown RBP22.23■■□□□ 1.15
CDCP1-202ENST00000425231 JAM2P57087 298 aa22.23■■□□□ 1.15
CDCP1-202ENST00000425231 POLR2FP61218 127 aaKnown RBP22.23■■□□□ 1.15
CDCP1-202ENST00000425231 NOMO3P69849 1222 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms