RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 CXCR3P49682 368 aa11.31□□□□□ -0.6
USP49-204ENST00000423567 OXCT1P55809 520 aa11.31□□□□□ -0.6
USP49-204ENST00000423567 ST8SIA6P61647 398 aa11.31□□□□□ -0.6
USP49-204ENST00000423567 ZNF234Q14588 700 aa11.31□□□□□ -0.6
USP49-204ENST00000423567 FNDC3BQ53EP0 1204 aaKnown RBP11.31□□□□□ -0.6
USP49-204ENST00000423567 FIGNQ5HY92 759 aa11.31□□□□□ -0.6
USP49-204ENST00000423567 MBLAC2Q68D91 279 aa11.31□□□□□ -0.6
USP49-204ENST00000423567 RNF43Q68DV7 783 aa11.31□□□□□ -0.6
USP49-204ENST00000423567 LRRC31Q6UY01 552 aa11.31□□□□□ -0.6
USP49-204ENST00000423567 PHLDB2Q86SQ0 1253 aa11.31□□□□□ -0.6
USP49-204ENST00000423567 PHF13Q86YI8 300 aaPredicted RBP11.31□□□□□ -0.6
USP49-204ENST00000423567 CFAP52Q8N1V2 620 aa11.31□□□□□ -0.6
USP49-204ENST00000423567 BAP1Q92560 729 aa11.31□□□□□ -0.6
USP49-204ENST00000423567 NT5C3BQ969T7 300 aa11.31□□□□□ -0.6
USP49-204ENST00000423567 RPRD1AQ96P16 312 aaPredicted RBP11.31□□□□□ -0.6
USP49-204ENST00000423567 PPP1R9BQ96SB3 815 aa11.31□□□□□ -0.6
USP49-204ENST00000423567 TBCBQ99426 244 aa11.31□□□□□ -0.6
USP49-204ENST00000423567 TKTL2Q9H0I9 626 aa11.31□□□□□ -0.6
USP49-204ENST00000423567 SIK2Q9H0K1 926 aa11.31□□□□□ -0.6
USP49-204ENST00000423567 PIGVQ9NUD9 493 aa11.31□□□□□ -0.6
USP49-204ENST00000423567 KIAA1522Q9P206 1035 aaPredicted RBP11.31□□□□□ -0.6
USP49-204ENST00000423567 TMEM59LQ9UK28 342 aa11.31□□□□□ -0.6
USP49-204ENST00000423567 HCN2Q9UL51 889 aa11.31□□□□□ -0.6
USP49-204ENST00000423567 RAD54BQ9Y620 910 aa11.31□□□□□ -0.6
USP49-204ENST00000423567 MYOFQ9NZM1 2061 aa11.31□□□□□ -0.6
USP49-204ENST00000423567 KIAA1549LQ6ZVL6 1849 aa11.3□□□□□ -0.6
USP49-204ENST00000423567 A0A1B0GVM2 712 aa11.3□□□□□ -0.6
USP49-204ENST00000423567 A0A1W2PQF6 199 aa11.3□□□□□ -0.6
USP49-204ENST00000423567 TCAF2A6NFQ2 919 aa11.3□□□□□ -0.6
USP49-204ENST00000423567 ZNF217O75362 1048 aa11.3□□□□□ -0.6
USP49-204ENST00000423567 ASLP04424 464 aa11.3□□□□□ -0.6
USP49-204ENST00000423567 EPHX1P07099 455 aa11.3□□□□□ -0.6
USP49-204ENST00000423567 DLDP09622 509 aaKnown RBP11.3□□□□□ -0.6
USP49-204ENST00000423567 CD70P32970 193 aa11.3□□□□□ -0.6
USP49-204ENST00000423567 IL12RB1P42701 662 aa11.3□□□□□ -0.6
USP49-204ENST00000423567 GSCP56915 257 aaPredicted RBP11.3□□□□□ -0.6
USP49-204ENST00000423567 ATP11AP98196 1134 aa11.3□□□□□ -0.6
USP49-204ENST00000423567 KLHL30Q0D2K2 578 aa11.3□□□□□ -0.6
USP49-204ENST00000423567 LMAN2Q12907 356 aa11.3□□□□□ -0.6
USP49-204ENST00000423567 AUHQ13825 339 aaKnown RBP11.3□□□□□ -0.6
USP49-204ENST00000423567 NFKBIBQ15653 356 aa11.3□□□□□ -0.6
USP49-204ENST00000423567 ARL13BQ3SXY8 428 aa11.3□□□□□ -0.6
USP49-204ENST00000423567 RNF219Q5W0B1 726 aaPredicted RBP11.3□□□□□ -0.6
USP49-204ENST00000423567 FBXL22Q6P050 247 aa11.3□□□□□ -0.6
USP49-204ENST00000423567 DNAJC24Q6P3W2 148 aa11.3□□□□□ -0.6
USP49-204ENST00000423567 LRSAM1Q6UWE0 723 aa11.3□□□□□ -0.6
USP49-204ENST00000423567 IRF2BP2Q7Z5L9 587 aa11.3□□□□□ -0.6
USP49-204ENST00000423567 ADIPOR2Q86V24 386 aa11.3□□□□□ -0.6
USP49-204ENST00000423567 KBTBD6Q86V97 674 aa11.3□□□□□ -0.6
USP49-204ENST00000423567 VPS36Q86VN1 386 aa11.3□□□□□ -0.6
USP49-204ENST00000423567 FAM160A2Q8N612 972 aaPredicted RBP11.3□□□□□ -0.6
USP49-204ENST00000423567 EMC1Q8N766 993 aa11.3□□□□□ -0.6
USP49-204ENST00000423567 ZNF454Q8N9F8 522 aa11.3□□□□□ -0.6
USP49-204ENST00000423567 C3orf20Q8ND61 904 aa11.3□□□□□ -0.6
USP49-204ENST00000423567 LOXL4Q96JB6 756 aa11.3□□□□□ -0.6
USP49-204ENST00000423567 CFAP57Q96MR6 1250 aa11.3□□□□□ -0.6
USP49-204ENST00000423567 PRMT1Q99873 361 aaKnown RBP11.3□□□□□ -0.6
USP49-204ENST00000423567 HAUS4Q9H6D7 363 aa11.3□□□□□ -0.6
USP49-204ENST00000423567 ARHGEF38Q9NXL2 777 aa11.3□□□□□ -0.6
USP49-204ENST00000423567 AIPL1Q9NZN9 384 aa11.3□□□□□ -0.6
USP49-204ENST00000423567 IFNKQ9P0W0 207 aa11.3□□□□□ -0.6
USP49-204ENST00000423567 VANGL2Q9ULK5 521 aa11.3□□□□□ -0.6
USP49-204ENST00000423567 HS3ST4Q9Y661 456 aa11.3□□□□□ -0.6
USP49-204ENST00000423567 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.29□□□□□ -0.6
USP49-204ENST00000423567 A0A1W2PQJ5 194 aa11.29□□□□□ -0.6
USP49-204ENST00000423567 WASH3PC4AMC7 463 aa11.29□□□□□ -0.6
USP49-204ENST00000423567 LRP3O75074 770 aa11.29□□□□□ -0.6
USP49-204ENST00000423567 CLDN11O75508 207 aa11.29□□□□□ -0.6
USP49-204ENST00000423567 ADCY5O95622 1261 aa11.29□□□□□ -0.6
USP49-204ENST00000423567 GABRG2P18507 467 aa11.29□□□□□ -0.6
USP49-204ENST00000423567 GPD1P21695 349 aa11.29□□□□□ -0.6
USP49-204ENST00000423567 PRKCIP41743 596 aa11.29□□□□□ -0.6
USP49-204ENST00000423567 PTPN9P43378 593 aa11.29□□□□□ -0.6
USP49-204ENST00000423567 ZNF177Q13360 481 aaPredicted RBP11.29□□□□□ -0.6
USP49-204ENST00000423567 SLC12A1Q13621 1099 aa11.29□□□□□ -0.6
USP49-204ENST00000423567 ENPP2Q13822 863 aa11.29□□□□□ -0.6
USP49-204ENST00000423567 CDO1Q16878 200 aa11.29□□□□□ -0.6
USP49-204ENST00000423567 PLK5Q496M5 336 aa11.29□□□□□ -0.6
USP49-204ENST00000423567 TDRD12Q587J7 1177 aaKnown RBP11.29□□□□□ -0.6
USP49-204ENST00000423567 OTUD1Q5VV17 481 aaPredicted RBP11.29□□□□□ -0.6
USP49-204ENST00000423567 TMEM215Q68D42 235 aa11.29□□□□□ -0.6
USP49-204ENST00000423567 ACAD10Q6JQN1 1059 aa11.29□□□□□ -0.6
USP49-204ENST00000423567 KIAA1211LQ6NV74 962 aa11.29□□□□□ -0.6
USP49-204ENST00000423567 DCUN1D2Q6PH85 259 aa11.29□□□□□ -0.6
USP49-204ENST00000423567 KIAA1324Q6UXG2 1013 aaKnown RBP11.29□□□□□ -0.6
USP49-204ENST00000423567 MON1BQ7L1V2 547 aa11.29□□□□□ -0.6
USP49-204ENST00000423567 KIAA0907Q7Z7F0 614 aaPredicted RBP11.29□□□□□ -0.6
USP49-204ENST00000423567 FAM131BQ86XD5 332 aa11.29□□□□□ -0.6
USP49-204ENST00000423567 KIAA2013Q8IYS2 634 aa11.29□□□□□ -0.6
USP49-204ENST00000423567 CCAR2Q8N163 923 aaKnown RBP11.29□□□□□ -0.6
USP49-204ENST00000423567 DCLK2Q8N568 766 aa11.29□□□□□ -0.6
USP49-204ENST00000423567 WFDC5Q8TCV5 224 aa11.29□□□□□ -0.6
USP49-204ENST00000423567 CYB5D2Q8WUJ1 264 aa11.29□□□□□ -0.6
USP49-204ENST00000423567 RXFP2Q8WXD0 754 aa11.29□□□□□ -0.6
USP49-204ENST00000423567 SORCS1Q8WY21 1168 aa11.29□□□□□ -0.6
USP49-204ENST00000423567 ERLEC1Q96DZ1 483 aa11.29□□□□□ -0.6
USP49-204ENST00000423567 VCPIP1Q96JH7 1222 aa11.29□□□□□ -0.6
USP49-204ENST00000423567 ZC3H10Q96K80 434 aaKnown RBP11.29□□□□□ -0.6
USP49-204ENST00000423567 TTYH3Q9C0H2 523 aa11.29□□□□□ -0.6
USP49-204ENST00000423567 CALCOCO1Q9P1Z2 691 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms